PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000368143	[[130152388, 130152531], [130154604, 130154730], [130164674, 130164748], [130166911, 130166997], [130182300, 130182416]]	[[130152463, 130152531], [130154604, 130154730], [130164674, 130164748], [130166911, 130166997], [130182300, 130182333]]
ENST00000438392	[[130152463, 130152531], [130154604, 130154730], [130164674, 130164748], [130166911, 130166997], [130182300, 130182389], [130182567, 130182692]]	[[130152463, 130152531], [130154604, 130154730], [130164674, 130164748], [130166911, 130166997], [130182300, 130182333]]
NM_001010876	[[130152388, 130152531], [130154604, 130154730], [130164674, 130164748], [130166911, 130166997], [130182300, 130182416]]	[[130152463, 130152531], [130154604, 130154730], [130164674, 130164748], [130166911, 130166997], [130182300, 130182333]]

Promoter

Chrom	Start	End	Description
chr6	130182387	130182407	CAGE_peak_2_at_C6orf191_5end
chr6	130182410	130182418	CAGE_peak_4_at_C6orf191_5end
chr6	130182422	130182452	CAGE_peak_1_at_C6orf191_5end
chr6	130182453	130182473	CAGE_peak_3_at_C6orf191_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I129923	129923800	129924001	0.43	[{'connected_gene': 'L3MBTL3', 'score': 0.23}, {'connected_gene': 'TMEM244', 'score': 0.21}, {'connected_gene': 'LOC105377999', 'score': 0.2}]
chr6	GH06I129946	129946876	129947025	0.43	[{'connected_gene': 'L3MBTL3', 'score': 10.8}, {'connected_gene': 'TMEM244', 'score': 0.17}, {'connected_gene': 'LOC105377999', 'score': 0.16}]
chr6	GH06I129894	129894427	129896106	0.72	[{'connected_gene': 'L3MBTL3', 'score': 10.63}, {'connected_gene': 'TMEM244', 'score': 5.57}, {'connected_gene': 'LOC105377999', 'score': 0.28}]
chr6	GH06I129930	129930676	129930680	0.22	[{'connected_gene': 'L3MBTL3', 'score': 0.25}, {'connected_gene': 'TMEM244', 'score': 0.2}, {'connected_gene': 'LOC105377999', 'score': 0.18}]
chr6	GH06I129947	129947183	129947486	0.38	[{'connected_gene': 'L3MBTL3', 'score': 10.8}, {'connected_gene': 'TMEM244', 'score': 0.17}, {'connected_gene': 'LOC105377999', 'score': 0.16}]
chr6	GH06I129921	129921276	129921425	0.59	[{'connected_gene': 'TMEM244', 'score': 0.22}, {'connected_gene': 'L3MBTL3', 'score': 0.22}, {'connected_gene': 'LOC105377999', 'score': 0.2}]
chr6	GH06I129891	129891761	129892112	0.24	[{'connected_gene': 'TMEM244', 'score': 11.25}, {'connected_gene': 'L3MBTL3', 'score': 10.8}, {'connected_gene': 'RPL5P21', 'score': 9.53}, {'connected_gene': 'LOC105377999', 'score': 0.28}]
chr6	GH06I129889	129889059	129891127	0.82	[{'connected_gene': 'TMEM244', 'score': 11.26}, {'connected_gene': 'L3MBTL3', 'score': 10.8}, {'connected_gene': 'RPL5P21', 'score': 10.45}, {'connected_gene': 'LOC105377999', 'score': 0.29}, {'connected_gene': 'GC06P129854', 'score': 0.28}]
chr6	GH06I129875	129875801	129876400	0.64	[{'connected_gene': 'TMEM244', 'score': 6.29}, {'connected_gene': 'LOC105377999', 'score': 0.34}, {'connected_gene': 'GC06P129854', 'score': 0.34}, {'connected_gene': 'L3MBTL3', 'score': 0.15}]
chr6	GH06I129863	129863292	129864692	0.46	[{'connected_gene': 'TMEM244', 'score': 0.77}, {'connected_gene': 'LOC105377999', 'score': 0.44}, {'connected_gene': 'GC06P129854', 'score': 0.44}, {'connected_gene': 'L3MBTL3', 'score': 0.14}]
chr6	GH06I129859	129859886	129862105	1.16	[{'connected_gene': 'TMEM244', 'score': 550.77}, {'connected_gene': 'LOC105377999', 'score': 0.44}, {'connected_gene': 'GC06P129854', 'score': 0.44}]
chr6	GH06I129853	129853663	129855238	0.88	[{'connected_gene': 'LOC105377999', 'score': 550.77}, {'connected_gene': 'GC06P129854', 'score': 550.77}, {'connected_gene': 'TMEM244', 'score': 7.77}]
chr6	GH06I129919	129919497	129921233	0.8	[{'connected_gene': 'BMPR1APS1', 'score': 11.53}, {'connected_gene': 'TMEM244', 'score': 0.22}, {'connected_gene': 'L3MBTL3', 'score': 0.22}, {'connected_gene': 'LOC105377999', 'score': 0.21}]
chr6	GH06I129881	129881983	129883260	0.92	[{'connected_gene': 'RPL5P21', 'score': 10.02}, {'connected_gene': 'L3MBTL3', 'score': 9.91}, {'connected_gene': 'TMEM244', 'score': 0.34}, {'connected_gene': 'LOC105377999', 'score': 0.31}, {'connected_gene': 'GC06P129854', 'score': 0.31}]
chr6	GH06I129936	129936401	129936999	0.69	[{'connected_gene': 'RPL5P21', 'score': 10.72}, {'connected_gene': 'L3MBTL3', 'score': 0.26}, {'connected_gene': 'TMEM244', 'score': 0.18}, {'connected_gene': 'LOC105377999', 'score': 0.18}]
chr6	GH06I129830	129830402	129830663	0.22	[{'connected_gene': 'RPL5P21', 'score': 10.23}, {'connected_gene': 'TMEM244', 'score': 4.82}, {'connected_gene': 'ENSG00000219302', 'score': 0.39}, {'connected_gene': 'GC06P129854', 'score': 0.34}]
chr6	GH06I129844	129844576	129844745	0.54	[{'connected_gene': 'GC06P129854', 'score': 0.44}, {'connected_gene': 'TMEM244', 'score': 0.37}, {'connected_gene': 'ENSG00000219302', 'score': 0.34}]
chr6	GH06I129852	129852415	129852505	0.91	[{'connected_gene': 'GC06P129854', 'score': 550.77}, {'connected_gene': 'TMEM244', 'score': 0.44}, {'connected_gene': 'ENSG00000219302', 'score': 0.29}]