PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
NM_152914	[[21142182, 21146742], [21147418, 21147537], [21156471, 21156530], [21156532, 21156578]]	[[21146625, 21146742], [21147418, 21147537], [21156471, 21156530], [21156532, 21156576]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr17	GH17I021245	21245343	21246214	0.63	[{'connected_gene': 'TMEM11', 'score': 13.13}, {'connected_gene': 'ENSG00000235530', 'score': 13.13}, {'connected_gene': 'DHRS7B', 'score': 11.4}, {'connected_gene': 'OLA1P2', 'score': 4.4}, {'connected_gene': 'PIR52097', 'score': 0.77}, {'connected_gene': 'NATD1', 'score': 0.44}]
chr17	GH17I021208	21208955	21216520	2.45	[{'connected_gene': 'TMEM11', 'score': 561.4}, {'connected_gene': 'ENSG00000235530', 'score': 556.52}, {'connected_gene': 'DHRS7B', 'score': 18.83}, {'connected_gene': 'FAM106B', 'score': 5.45}, {'connected_gene': 'NATD1', 'score': 5.17}, {'connected_gene': 'GC17M021160', 'score': 0.23}]
chr17	GH17I021250	21250608	21251843	0.58	[{'connected_gene': 'TMEM11', 'score': 12.73}, {'connected_gene': 'ENSG00000235530', 'score': 12.73}, {'connected_gene': 'NATD1', 'score': 7.09}, {'connected_gene': 'PIR52097', 'score': 0.44}]
chr17	GH17I021131	21131227	21131500	0.77	[{'connected_gene': 'TMEM11', 'score': 11.81}, {'connected_gene': 'ENSG00000235530', 'score': 11.81}, {'connected_gene': 'USP22', 'score': 11.1}, {'connected_gene': 'NATD1', 'score': 4.38}, {'connected_gene': 'MAP2K3', 'score': 3.6}, {'connected_gene': 'DHRS7B', 'score': 0.44}, {'connected_gene': 'GC17M021160', 'score': 0.29}]
chr17	GH17I021257	21257001	21257400	1.04	[{'connected_gene': 'MAP2K3', 'score': 12.55}, {'connected_gene': 'TMEM11', 'score': 12.33}, {'connected_gene': 'ENSG00000235530', 'score': 12.33}, {'connected_gene': 'DHRS7B', 'score': 11.29}, {'connected_gene': 'NATD1', 'score': 0.77}, {'connected_gene': 'EIF1P5', 'score': 0.77}]
chr17	GH17I021281	21281583	21290737	2.65	[{'connected_gene': 'MAP2K3', 'score': 569.75}, {'connected_gene': 'GC17P024329', 'score': 550.77}, {'connected_gene': 'KCNJ12', 'score': 14.8}, {'connected_gene': 'DHRS7B', 'score': 11.38}, {'connected_gene': 'NATD1', 'score': 4.56}]
chr17	GH17I021267	21267225	21269236	1.03	[{'connected_gene': 'KCNJ12', 'score': 9.72}, {'connected_gene': 'NATD1', 'score': 4.76}, {'connected_gene': 'PIR52124', 'score': 0.77}, {'connected_gene': 'EIF1P5', 'score': 0.44}]
chr17	GH17I021126	21125712	21128478	2.46	[{'connected_gene': 'DHRS7B', 'score': 557.64}, {'connected_gene': 'TMEM11', 'score': 9.14}, {'connected_gene': 'MAP2K3', 'score': 5.41}, {'connected_gene': 'KCNJ18', 'score': 3.07}, {'connected_gene': 'NATD1', 'score': 1.4}, {'connected_gene': 'GC17M021160', 'score': 0.29}]
chr17	GH17I021252	21252400	21254285	2.08	[{'connected_gene': 'NATD1', 'score': 560.22}, {'connected_gene': 'ENSG00000235530', 'score': 22.65}, {'connected_gene': 'TMEM11', 'score': 12.73}, {'connected_gene': 'PIR52097', 'score': 0.39}]
chr17	GH17I021279	21279802	21280650	1.3	[{'connected_gene': 'NATD1', 'score': 4.47}, {'connected_gene': 'MAP2K3', 'score': 0.77}, {'connected_gene': 'PIR52124', 'score': 0.44}]
chr17	GH17I021260	21260601	21260800	0.4	[{'connected_gene': 'EIF1P5', 'score': 550.77}, {'connected_gene': 'MAP2K3', 'score': 11.9}, {'connected_gene': 'TMEM11', 'score': 11.72}, {'connected_gene': 'ENSG00000235530', 'score': 11.72}, {'connected_gene': 'DHRS7B', 'score': 11.54}, {'connected_gene': 'NATD1', 'score': 8.31}, {'connected_gene': 'PIR52124', 'score': 0.39}]
chr17	GH17I021239	21239808	21240203	0.59	[{'connected_gene': 'PIR36411', 'score': 550.77}, {'connected_gene': 'TMEM11', 'score': 13.15}, {'connected_gene': 'ENSG00000235530', 'score': 13.15}, {'connected_gene': 'DHRS7B', 'score': 11.4}, {'connected_gene': 'NATD1', 'score': 0.39}, {'connected_gene': 'RN7SL426P', 'score': 0.39}, {'connected_gene': 'GC17M021230', 'score': 0.39}]
chr17	GH17I021243	21240408	21240497	0.31	[{'connected_gene': 'PIR36411', 'score': 550.77}, {'connected_gene': 'PIR52097', 'score': 550.77}, {'connected_gene': 'TMEM11', 'score': 13.15}, {'connected_gene': 'ENSG00000235530', 'score': 13.15}, {'connected_gene': 'DHRS7B', 'score': 11.4}, {'connected_gene': 'NATD1', 'score': 0.39}, {'connected_gene': 'RN7SL426P', 'score': 0.39}, {'connected_gene': 'GC17M021230', 'score': 0.39}]
chr17	GH17I021240	21240348	21240389	0.31	[{'connected_gene': 'PIR36411', 'score': 550.77}, {'connected_gene': 'PIR52097', 'score': 550.77}, {'connected_gene': 'TMEM11', 'score': 13.15}, {'connected_gene': 'ENSG00000235530', 'score': 13.15}, {'connected_gene': 'DHRS7B', 'score': 11.4}, {'connected_gene': 'NATD1', 'score': 0.39}, {'connected_gene': 'RN7SL426P', 'score': 0.39}, {'connected_gene': 'GC17M021230', 'score': 0.39}]
chr17	GH17I021241	21241823	21242344	0.63	[{'connected_gene': 'PIR52097', 'score': 550.77}, {'connected_gene': 'PIR36411', 'score': 550.77}, {'connected_gene': 'TMEM11', 'score': 13.15}, {'connected_gene': 'ENSG00000235530', 'score': 13.15}, {'connected_gene': 'DHRS7B', 'score': 11.4}, {'connected_gene': 'NATD1', 'score': 0.39}]
chr17	GH17I021242	21242640	21244218	0.63	[{'connected_gene': 'PIR52097', 'score': 550.77}, {'connected_gene': 'TMEM11', 'score': 13.15}, {'connected_gene': 'ENSG00000235530', 'score': 13.15}, {'connected_gene': 'DHRS7B', 'score': 11.4}, {'connected_gene': 'OLA1P2', 'score': 4.1}, {'connected_gene': 'NATD1', 'score': 0.44}]
chr17	GH17I021274	21274941	21276800	1.67	[{'connected_gene': 'ENSG00000235530', 'score': 11.0}, {'connected_gene': 'KCNJ12', 'score': 10.35}, {'connected_gene': 'NATD1', 'score': 5.72}, {'connected_gene': 'MAP2K3', 'score': 2.71}, {'connected_gene': 'CCDC144NL', 'score': 1.93}, {'connected_gene': 'PIR52124', 'score': 0.77}]
chr17	GH17I021275	21273007	21273302	1.11	[{'connected_gene': 'PIR52124', 'score': 550.77}, {'connected_gene': 'NATD1', 'score': 8.07}, {'connected_gene': 'MAP2K3', 'score': 0.39}]