PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000444118	[[94463615, 94463639], [94464344, 94464581], [94465682, 94465806], [94465928, 94466011], [94467176, 94467276], [94467490, 94468068], [94469568, 94469700], [94471200, 94471317], [94473356, 94473898]]	None
ENST00000455802	[[94463619, 94463639], [94464460, 94464581], [94465682, 94465806], [94465928, 94466011], [94467490, 94467569]]	None
ENST00000359253	[[94463641, 94463917], [94464344, 94464581], [94465928, 94466011], [94467490, 94467665], [94469568, 94469700], [94471200, 94471317], [94474954, 94475209]]	None
ENST00000314629	[[94463641, 94463917], [94464344, 94464581], [94465928, 94466011], [94467490, 94467665], [94469568, 94469700], [94471200, 94471317], [94474838, 94474929], [94477216, 94477439], [94477556, 94477870], [94477967, 94478040]]	None
ENST00000422540	[[94463641, 94463917], [94464344, 94464581], [94465928, 94466011], [94467490, 94467669], [94468109, 94468255], [94469568, 94469700], [94471200, 94471317], [94474838, 94474929], [94477216, 94477439], [94477556, 94477870], [94477967, 94478040]]	None
ENST00000449472	[[94463685, 94463917], [94464460, 94464581], [94465682, 94465806]]	None

Promoter

Chrom	Start	End	Description
chr14	94463642	94463653	CAGE_peak_1_at_LINC00521_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I094025	94025946	94030084	2.01	[{'connected_gene': 'OTUB2', 'score': 556.39}, {'connected_gene': 'BTBD7', 'score': 28.2}, {'connected_gene': 'DDX24', 'score': 17.16}, {'connected_gene': 'CCDC197', 'score': 16.1}, {'connected_gene': 'ASB2', 'score': 15.3}, {'connected_gene': 'IFI27L2', 'score': 10.8}, {'connected_gene': 'IFI27L1', 'score': 10.54}, {'connected_gene': 'IFI27', 'score': 10.32}, {'connected_gene': 'GC14M094051', 'score': 0.34}, {'connected_gene': 'GC14M094050', 'score': 0.34}]
chr14	GH14I093953	93953415	93966585	1.76	[{'connected_gene': 'BTBD7', 'score': 73.1}, {'connected_gene': 'SERPINA1', 'score': 13.48}, {'connected_gene': 'CCDC197', 'score': 12.01}, {'connected_gene': 'DDX24', 'score': 11.2}, {'connected_gene': 'UBR7', 'score': 10.15}, {'connected_gene': 'IFI27L2', 'score': 9.95}, {'connected_gene': 'IFI27', 'score': 9.56}, {'connected_gene': 'RPSAP4', 'score': 7.13}, {'connected_gene': 'FAM181A-AS1', 'score': 4.86}, {'connected_gene': 'ASB2', 'score': 4.19}, {'connected_gene': 'MIR4506', 'score': 0.39}]
chr14	GH14I093906	93906835	93906984	0.69	[{'connected_gene': 'ASB2', 'score': 10.7}, {'connected_gene': 'CCDC197', 'score': 10.67}, {'connected_gene': 'FAM181A', 'score': 0.39}, {'connected_gene': 'ENSG00000279593', 'score': 0.39}, {'connected_gene': 'FAM181A-AS1', 'score': 0.34}]
chr14	GH14I093903	93903615	93903784	0.6	[{'connected_gene': 'ASB2', 'score': 10.69}, {'connected_gene': 'CCDC197', 'score': 10.67}, {'connected_gene': 'ENSG00000279593', 'score': 0.44}, {'connected_gene': 'FAM181A', 'score': 0.37}]
chr14	GH14I093902	93902567	93903109	0.79	[{'connected_gene': 'ASB2', 'score': 10.69}, {'connected_gene': 'CCDC197', 'score': 10.67}, {'connected_gene': 'ENSG00000279593', 'score': 0.44}, {'connected_gene': 'FAM181A', 'score': 0.37}]
chr14	GH14I093951	93951067	93952942	0.46	[{'connected_gene': 'ASB2', 'score': 12.03}, {'connected_gene': 'CCDC197', 'score': 11.97}, {'connected_gene': 'FAM181A-AS1', 'score': 7.41}, {'connected_gene': 'MIR4506', 'score': 0.77}]
chr14	GH14I093980	93980193	93983205	1.05	[{'connected_gene': 'ASB2', 'score': 0.77}, {'connected_gene': 'CCDC197', 'score': 0.44}]
chr14	GH14I093927	93927295	93927354	0.76	[{'connected_gene': 'FAM181A-AS1', 'score': 550.77}, {'connected_gene': 'FAM181A', 'score': 550.44}, {'connected_gene': 'ASB2', 'score': 11.43}, {'connected_gene': 'CCDC197', 'score': 11.4}, {'connected_gene': 'ENSG00000258987', 'score': 0.39}]
chr14	GH14I093987	93987975	93988101	0.58	[{'connected_gene': 'CCDC197', 'score': 550.77}, {'connected_gene': 'OTUB2', 'score': 0.31}]
chr14	GH14I093994	93994554	93995754	1.05	[{'connected_gene': 'CCDC197', 'score': 8.03}, {'connected_gene': 'OTUB2', 'score': 0.34}]
chr14	GH14I094001	94001795	94002044	1.03	[{'connected_gene': 'CCDC197', 'score': 6.42}, {'connected_gene': 'OTUB2', 'score': 0.39}]
chr14	GH14I093986	93986824	93987877	0.58	[{'connected_gene': 'CCDC197', 'score': 556.72}, {'connected_gene': 'OTUB2', 'score': 0.31}]
chr14	GH14I093989	93989624	93990616	0.84	[{'connected_gene': 'CCDC197', 'score': 0.77}, {'connected_gene': 'OTUB2', 'score': 0.31}]
chr14	GH14I093983	93983605	93985953	1.25	[{'connected_gene': 'CCDC197', 'score': 0.77}, {'connected_gene': 'ASB2', 'score': 0.44}]
chr14	GH14I094011	94011915	94012124	0.67	[{'connected_gene': 'IFI27L1', 'score': 5.33}, {'connected_gene': 'OTUB2', 'score': 0.77}, {'connected_gene': 'CCDC197', 'score': 0.34}]
chr14	GH14I094120	94120650	94121954	0.38	[{'connected_gene': 'IFI27L1', 'score': 24.65}, {'connected_gene': 'BTBD7', 'score': 15.68}, {'connected_gene': 'DDX24', 'score': 10.54}, {'connected_gene': 'CCDC197', 'score': 10.37}, {'connected_gene': 'ASB2', 'score': 10.37}, {'connected_gene': 'SERPINA9', 'score': 9.01}, {'connected_gene': 'ENSG00000256357', 'score': 8.7}, {'connected_gene': 'IFI27L2', 'score': 5.97}, {'connected_gene': 'IFI27', 'score': 0.37}]
chr14	GH14I094020	94020847	94023531	0.96	[{'connected_gene': 'IFI27L1', 'score': 15.19}, {'connected_gene': 'CCDC197', 'score': 11.24}, {'connected_gene': 'ASB2', 'score': 11.2}, {'connected_gene': 'DDX24', 'score': 10.37}, {'connected_gene': 'SERPINA2', 'score': 5.06}, {'connected_gene': 'OTUB2', 'score': 0.44}, {'connected_gene': 'GC14M094051', 'score': 0.31}, {'connected_gene': 'GC14M094050', 'score': 0.31}]