PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr2	163175533	163175583	CAGE_peak_4_at_GCA_5end
chr2	163175584	163175606	CAGE_peak_5_at_GCA_5end
chr2	163175609	163175631	CAGE_peak_6_at_GCA_5end
chr2	163200618	163200667	CAGE_peak_1_at_GCA_5end
chr2	163200696	163200710	CAGE_peak_2_at_GCA_5end
chr2	163200864	163200919	CAGE_peak_3_at_GCA_5end
chr2	163200920	163200931	CAGE_peak_11_at_GCA_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I162316	162316600	162320840	2.17	[{'connected_gene': 'IFIH1', 'score': 550.77}, {'connected_gene': 'GCA', 'score': 550.77}, {'connected_gene': 'FAP', 'score': 4.91}, {'connected_gene': 'GC02M162307', 'score': 0.39}]
chr2	GH02I162366	162366451	162366567	0.22	[{'connected_gene': 'GCA', 'score': 4.6}, {'connected_gene': 'KCNH7', 'score': 1.52}, {'connected_gene': 'GC02P162329', 'score': 0.28}, {'connected_gene': 'RNA5SP109', 'score': 0.12}]
chr2	GH02I162343	162343342	162345601	1.98	[{'connected_gene': 'GCA', 'score': 562.59}, {'connected_gene': 'IFIH1', 'score': 12.59}, {'connected_gene': 'FAP', 'score': 4.98}, {'connected_gene': 'GC02P162329', 'score': 0.37}, {'connected_gene': 'RNA5SP109', 'score': 0.1}]
chr2	GH02I162478	162478971	162479128	0.33	[{'connected_gene': 'GCA', 'score': 5.85}, {'connected_gene': 'RNA5SP109', 'score': 0.37}, {'connected_gene': 'GC02P162329', 'score': 0.11}, {'connected_gene': 'KCNH7', 'score': 0.05}]
chr2	GH02I162367	162366148	162366172	0.22	[{'connected_gene': 'GCA', 'score': 5.12}, {'connected_gene': 'GC02P162329', 'score': 0.28}, {'connected_gene': 'RNA5SP109', 'score': 0.12}]
chr2	GH02I162321	162321401	162321600	0.51	[{'connected_gene': 'FAP', 'score': 4.38}, {'connected_gene': 'PIR31305', 'score': 0.77}, {'connected_gene': 'GCA', 'score': 0.77}]
chr2	GH02I162347	162347201	162347400	0.2	[{'connected_gene': 'GC02P162329', 'score': 0.37}, {'connected_gene': 'GCA', 'score': 0.31}, {'connected_gene': 'RNA5SP109', 'score': 0.11}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000473240	[[163175349, 163175693], [163175791, 163175905], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213344]]	None
ENST00000446271	[[163175393, 163175749], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213323]]	[[163175644, 163175749], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213323]]
ENST00000429691	[[163175543, 163175735], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163217255, 163217608]]	[[163204117, 163204252], [163208847, 163208917], [163212947, 163212991], [163217255, 163217270]]
ENST00000437150	[[163200597, 163200785], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163216726, 163217930]]	[[163200758, 163200785], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163216726, 163216753]]
ENST00000481161	[[163200643, 163200785], [163204087, 163204252], [163208847, 163208917], [163212947, 163213175]]	None
ENST00000453113	[[163200644, 163200785], [163203091, 163203175], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415]]	[[163204117, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415]]
ENST00000487445	[[163200668, 163200785], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415], [163215553, 163216062], [163216726, 163217481]]	None
ENST00000479199	[[163200691, 163200785], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213491]]	None
ENST00000233612	[[163200847, 163201035], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163216726, 163217632]]	[[163204117, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163216726, 163216753]]
ENST00000414723	[[163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163227815, 163228105]]	[[163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163227815, 163227890]]
NM_001330265	[[163175272, 163175693], [163175791, 163175905], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163216726, 163219618]]	[[163175833, 163175905], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163216726, 163216753]]
NM_001330266	[[163175272, 163175735], [163175810, 163175905], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163216726, 163219618]]	[[163175833, 163175905], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163216726, 163216753]]
NM_001330268	[[163175272, 163175749], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163216726, 163219618]]	[[163175644, 163175749], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163216726, 163216753]]
NM_001330267	[[163175491, 163175609], [163175791, 163175905], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163216726, 163219618]]	[[163175833, 163175905], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163216726, 163216753]]
NM_012198	[[163200582, 163200785], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163216726, 163219618]]	[[163200758, 163200785], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163216726, 163216753]]
NM_001330271	[[163200890, 163201035], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163216726, 163219618]]	[[163204117, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163216726, 163216753]]
NM_001330270	[[163200890, 163201106], [163204087, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163216726, 163219618]]	[[163204117, 163204252], [163208847, 163208917], [163212947, 163212991], [163213267, 163213415], [163215553, 163215667], [163216003, 163216062], [163216726, 163216753]]