Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000262450 [[6161852, 6165487], [6166293, 6166347], [6166454, 6166569], [6166675, 6166839], [6169854, 6170050], [6170453, 6170586], [6171834, 6171943], [6172199, 6172337], [6172968, 6173058], [6181164, 6181297], [6181553, 6181633], [6184007, 6184167], [6184576, 6184721], [6185159, 6185293], [6185583, 6185672], [6185825, 6185918], [6186631, 6186806], [6188105, 6188278], [6188558, 6188669], [6188897, 6189129], [6190263, 6190388], [6191690, 6191808], [6194187, 6194319], [6194777, 6194919], [6195289, 6195463], [6196576, 6196698], [6196787, 6196925], [6202187, 6202388], [6202473, 6202665], [6203882, 6203991], [6204083, 6204215], [6206271, 6206483], [6206724, 6206931], [6208913, 6209135], [6209305, 6209472], [6211091, 6211215], [6212471, 6212596], [6214719, 6214958], [6215658, 6215777], [6219395, 6219575], [6228209, 6228337], [6240004, 6240183]] [[6166339, 6166347], [6166454, 6166569], [6166675, 6166839], [6169854, 6170050], [6170453, 6170586], [6171834, 6171943], [6172199, 6172337], [6172968, 6173058], [6181164, 6181297], [6181553, 6181633], [6184007, 6184167], [6184576, 6184721], [6185159, 6185293], [6185583, 6185672], [6185825, 6185918], [6186631, 6186806], [6188105, 6188278], [6188558, 6188669], [6188897, 6189129], [6190263, 6190388], [6191690, 6191808], [6194187, 6194319], [6194777, 6194919], [6195289, 6195463], [6196576, 6196698], [6196787, 6196925], [6202187, 6202388], [6202473, 6202665], [6203882, 6203991], [6204083, 6204215], [6206271, 6206483], [6206724, 6206931], [6208913, 6209135], [6209305, 6209472], [6211091, 6211215], [6212471, 6212596], [6214719, 6214958], [6215658, 6215777], [6219395, 6219575], [6228209, 6228337], [6240004, 6240083]]
ENST00000378021 [[6161852, 6165487], [6166293, 6166347], [6166675, 6166839], [6169854, 6170050], [6170453, 6170586], [6171834, 6171943], [6172199, 6172337], [6172968, 6173058], [6181164, 6181297], [6181553, 6181633], [6184007, 6184167], [6184576, 6184721], [6185159, 6185293], [6185583, 6185672], [6185825, 6185918], [6186631, 6186806], [6188105, 6188278], [6188558, 6188669], [6188897, 6189129], [6190263, 6190388], [6191690, 6191808], [6194187, 6194319], [6194777, 6194919], [6195289, 6195463], [6196576, 6196698], [6196787, 6196925], [6202187, 6202388], [6202473, 6202665], [6203882, 6203991], [6204083, 6204215], [6206271, 6206483], [6206724, 6206931], [6208913, 6209135], [6209305, 6209472], [6211091, 6211215], [6212471, 6212596], [6214719, 6214958], [6215658, 6215777], [6219395, 6219575], [6228209, 6228337], [6240004, 6240183]] [[6165427, 6165487], [6166293, 6166347], [6166675, 6166839], [6169854, 6170050], [6170453, 6170586], [6171834, 6171943], [6172199, 6172337], [6172968, 6173058], [6181164, 6181297], [6181553, 6181633], [6184007, 6184167], [6184576, 6184721], [6185159, 6185293], [6185583, 6185672], [6185825, 6185918], [6186631, 6186806], [6188105, 6188278], [6188558, 6188669], [6188897, 6189087]]
ENST00000475121 [[6165140, 6165487], [6166293, 6166347], [6166675, 6166832]] [[6165427, 6165487], [6166293, 6166347], [6166675, 6166832]]
ENST00000462991 [[6165140, 6165487], [6166293, 6166347], [6166675, 6166839], [6169854, 6170050], [6170453, 6170586], [6171834, 6171943], [6172199, 6172337], [6172968, 6173058], [6173370, 6173476], [6181164, 6181297], [6181553, 6181633], [6184007, 6184167], [6184576, 6184721], [6185159, 6185293], [6185583, 6185672], [6185825, 6185918], [6186631, 6186806], [6188105, 6188278], [6188558, 6188669], [6188897, 6189129], [6190263, 6190388], [6191690, 6191808], [6194187, 6194319], [6194777, 6194919], [6195289, 6195463], [6196576, 6196698], [6196787, 6196925], [6202187, 6202388], [6202473, 6202665], [6203882, 6203991], [6204083, 6204164]] [[6173042, 6173058], [6173370, 6173476], [6181164, 6181297], [6181553, 6181633], [6184007, 6184167], [6184576, 6184721], [6185159, 6185293], [6185583, 6185672], [6185825, 6185918], [6186631, 6186806], [6188105, 6188278], [6188558, 6188669], [6188897, 6189129], [6190263, 6190388], [6191690, 6191808], [6194187, 6194319], [6194777, 6194919], [6195289, 6195463], [6196576, 6196698], [6196787, 6196925], [6202187, 6202388], [6202473, 6202665], [6203882, 6203991], [6204083, 6204164]]
ENST00000377999 [[6165142, 6165487], [6166293, 6166347], [6166675, 6166839], [6169854, 6170050], [6170453, 6170586], [6171834, 6171943], [6172199, 6172337], [6172968, 6173058], [6181164, 6181297], [6181553, 6181633], [6184007, 6184167], [6184576, 6184721], [6185159, 6185293], [6185583, 6185672], [6185825, 6185918], [6186631, 6186806], [6188105, 6188278], [6188558, 6188669], [6188897, 6189129], [6190207, 6190388], [6191690, 6191799]] [[6189086, 6189129], [6190207, 6190388], [6191690, 6191799]]
ENST00000496404 [[6165150, 6165487], [6166293, 6166347], [6166454, 6166569], [6166675, 6166839], [6169854, 6170050], [6170453, 6170586], [6171834, 6171943], [6172199, 6172337], [6172968, 6173058], [6181164, 6181297], [6181553, 6181633], [6189099, 6189129], [6190263, 6190388], [6191690, 6191808], [6194187, 6194319], [6194777, 6194919], [6195289, 6195463], [6196576, 6196698], [6196787, 6196925], [6202187, 6202388], [6202473, 6202665], [6203882, 6203991], [6204083, 6204215], [6206271, 6206483], [6206724, 6206931], [6208913, 6209135], [6209305, 6209472], [6211091, 6211215], [6212471, 6212596], [6214719, 6214958], [6215658, 6215777], [6219395, 6219575], [6228209, 6228337], [6240004, 6240083]] [[6173010, 6173058], [6181164, 6181297], [6181553, 6181633], [6189099, 6189129], [6190263, 6190388], [6191690, 6191808], [6194187, 6194319], [6194777, 6194919], [6195289, 6195463], [6196576, 6196698], [6196787, 6196925], [6202187, 6202388], [6202473, 6202665], [6203882, 6203991], [6204083, 6204215], [6206271, 6206483], [6206724, 6206931], [6208913, 6209135], [6209305, 6209472], [6211091, 6211215], [6212471, 6212596], [6214719, 6214958], [6215658, 6215777], [6219395, 6219575], [6228209, 6228337], [6240004, 6240083]]
ENST00000491020 [[6185593, 6185672], [6185825, 6185918], [6186631, 6186806], [6187142, 6187224], [6188105, 6188278], [6188558, 6188602]] [[6186723, 6186806], [6187142, 6187224], [6188105, 6188278], [6188558, 6188602]]
NM_015557 [[6161846, 6165487], [6166293, 6166347], [6166454, 6166569], [6166675, 6166839], [6169854, 6170050], [6170453, 6170586], [6171834, 6171943], [6172199, 6172337], [6172968, 6173058], [6181164, 6181297], [6181553, 6181633], [6184007, 6184167], [6184576, 6184721], [6185159, 6185293], [6185583, 6185672], [6185825, 6185918], [6186631, 6186806], [6188105, 6188278], [6188558, 6188669], [6188897, 6189129], [6190263, 6190388], [6191690, 6191808], [6194187, 6194319], [6194777, 6194919], [6195289, 6195463], [6196576, 6196698], [6196787, 6196925], [6202187, 6202388], [6202473, 6202665], [6203882, 6203991], [6204083, 6204215], [6206271, 6206483], [6206724, 6206931], [6208913, 6209135], [6209305, 6209472], [6211091, 6211215], [6212471, 6212596], [6214719, 6214958], [6215658, 6215777], [6219395, 6219575], [6228209, 6228337], [6240004, 6240194]] [[6166339, 6166347], [6166454, 6166569], [6166675, 6166839], [6169854, 6170050], [6170453, 6170586], [6171834, 6171943], [6172199, 6172337], [6172968, 6173058], [6181164, 6181297], [6181553, 6181633], [6184007, 6184167], [6184576, 6184721], [6185159, 6185293], [6185583, 6185672], [6185825, 6185918], [6186631, 6186806], [6188105, 6188278], [6188558, 6188669], [6188897, 6189129], [6190263, 6190388], [6191690, 6191808], [6194187, 6194319], [6194777, 6194919], [6195289, 6195463], [6196576, 6196698], [6196787, 6196925], [6202187, 6202388], [6202473, 6202665], [6203882, 6203991], [6204083, 6204215], [6206271, 6206483], [6206724, 6206931], [6208913, 6209135], [6209305, 6209472], [6211091, 6211215], [6212471, 6212596], [6214719, 6214958], [6215658, 6215777], [6219395, 6219575], [6228209, 6228337], [6240004, 6240083]]
Promoter
Chrom Start End Description
chr1 6204399 6204411 CAGE_peak_6_at_CHD5_5end
chr1 6240036 6240050 CAGE_peak_4_at_CHD5_5end
chr1 6240065 6240088 CAGE_peak_2_at_CHD5_5end
chr1 6240094 6240110 CAGE_peak_5_at_CHD5_5end
chr1 6240191 6240219 CAGE_peak_3_at_CHD5_5end
chr1 6240314 6240315 CAGE_peak_8_at_CHD5_5end
chr1 6240325 6240416 CAGE_peak_1_at_CHD5_5end

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