PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000536405	[[61513964, 61514613], [61514822, 61514935], [61516014, 61517214], [61523106, 61523168], [61524554, 61524835], [61524960, 61525121]]	None
ENST00000541891	[[61514396, 61514595], [61514822, 61514935], [61516014, 61516165]]	None
ENST00000244906	[[61521500, 61521917], [61523106, 61523168], [61524554, 61524835], [61524960, 61525127]]	None
NR_026882	[[61521500, 61521917], [61523106, 61523168], [61524554, 61524835], [61524960, 61525136]]	None

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I061850	61850653	61852418	0.49	[{'connected_gene': 'FADS2', 'score': 66.87}, {'connected_gene': 'FADS1', 'score': 12.33}, {'connected_gene': 'FADS3', 'score': 12.25}, {'connected_gene': 'RAB3IL1', 'score': 11.42}, {'connected_gene': 'DKFZP434K028', 'score': 10.78}, {'connected_gene': 'MYRF', 'score': 10.77}, {'connected_gene': 'INCENP', 'score': 10.76}, {'connected_gene': 'BEST1', 'score': 10.74}, {'connected_gene': 'POLR2G', 'score': 4.81}, {'connected_gene': 'MIR6746', 'score': 0.31}]
chr11	GH11I061796	61796829	61798814	1.21	[{'connected_gene': 'FADS2', 'score': 25.57}, {'connected_gene': 'FADS1', 'score': 11.86}, {'connected_gene': 'DKFZP434K028', 'score': 11.67}, {'connected_gene': 'BEST1', 'score': 10.6}, {'connected_gene': 'FEN1', 'score': 0.44}, {'connected_gene': 'MIR1908', 'score': 0.37}, {'connected_gene': 'GC11P061758', 'score': 0.28}]
chr11	GH11I061679	61679943	61681016	2.12	[{'connected_gene': 'DAGLA', 'score': 550.77}, {'connected_gene': 'MTA2', 'score': 16.23}, {'connected_gene': 'TMEM138', 'score': 14.57}, {'connected_gene': 'EML3', 'score': 14.16}, {'connected_gene': 'CPSF7', 'score': 13.44}, {'connected_gene': 'GANAB', 'score': 12.01}, {'connected_gene': 'INTS5', 'score': 11.72}, {'connected_gene': 'CSKMT', 'score': 11.0}, {'connected_gene': 'UBXN1', 'score': 10.29}, {'connected_gene': 'DKFZP434K028', 'score': 7.22}, {'connected_gene': 'PIR41833', 'score': 0.21}]
chr11	GH11I061625	61625573	61629241	1.01	[{'connected_gene': 'DAGLA', 'score': 17.28}, {'connected_gene': 'SYT7', 'score': 11.53}, {'connected_gene': 'MYRF', 'score': 10.78}, {'connected_gene': 'DKFZP434K028', 'score': 10.77}, {'connected_gene': 'GC11P061636', 'score': 0.44}, {'connected_gene': 'RPLP0P2', 'score': 0.39}]
chr11	GH11I061693	61693679	61702169	2.14	[{'connected_gene': 'DAGLA', 'score': 567.51}, {'connected_gene': 'MYRF', 'score': 20.92}, {'connected_gene': 'DKFZP434K028', 'score': 19.36}, {'connected_gene': 'SYT7', 'score': 11.01}, {'connected_gene': 'FTH1', 'score': 9.15}, {'connected_gene': 'CYB561A3', 'score': 7.63}, {'connected_gene': 'VWCE', 'score': 4.66}, {'connected_gene': 'SDHAF2', 'score': 4.48}, {'connected_gene': 'DDB1', 'score': 4.33}, {'connected_gene': 'CPSF7', 'score': 4.26}, {'connected_gene': 'PIR41833', 'score': 0.25}]
chr11	GH11I061731	61731896	61734041	1.1	[{'connected_gene': 'DAGLA', 'score': 16.92}, {'connected_gene': 'MYRF', 'score': 13.12}, {'connected_gene': 'DKFZP434K028', 'score': 12.6}, {'connected_gene': 'TMEM258', 'score': 11.65}, {'connected_gene': 'FEN1', 'score': 11.65}, {'connected_gene': 'MIR611', 'score': 11.65}, {'connected_gene': 'SYT7', 'score': 10.46}, {'connected_gene': 'PIR41833', 'score': 0.39}]
chr11	GH11I061598	61598865	61604114	1.12	[{'connected_gene': 'DAGLA', 'score': 11.1}, {'connected_gene': 'MYRF', 'score': 10.62}, {'connected_gene': 'DKFZP434K028', 'score': 10.62}, {'connected_gene': 'SDHAF2', 'score': 4.89}, {'connected_gene': 'RPLP0P2', 'score': 0.39}, {'connected_gene': 'LOC101927495', 'score': 0.39}]
chr11	GH11I061702	61702601	61703400	0.58	[{'connected_gene': 'DAGLA', 'score': 12.33}, {'connected_gene': 'MYRF', 'score': 11.14}, {'connected_gene': 'DKFZP434K028', 'score': 11.13}, {'connected_gene': 'DDB1', 'score': 4.32}, {'connected_gene': 'LBHD1', 'score': 4.3}, {'connected_gene': 'PIR41833', 'score': 0.26}]
chr11	GH11I061706	61706198	61708028	0.43	[{'connected_gene': 'DAGLA', 'score': 18.45}, {'connected_gene': 'MYRF', 'score': 11.59}, {'connected_gene': 'DKFZP434K028', 'score': 11.58}, {'connected_gene': 'PIR41833', 'score': 0.28}]
chr11	GH11I061710	61710946	61711859	0.38	[{'connected_gene': 'DAGLA', 'score': 7.49}, {'connected_gene': 'DKFZP434K028', 'score': 4.85}, {'connected_gene': 'PIR41833', 'score': 0.29}]
chr11	GH11I061665	61665860	61668812	0.84	[{'connected_gene': 'DAGLA', 'score': 5.89}, {'connected_gene': 'DKFZP434K028', 'score': 5.28}, {'connected_gene': 'GC11M061648', 'score': 0.44}]
chr11	GH11I061670	61670949	61671981	0.95	[{'connected_gene': 'MYRF', 'score': 21.31}, {'connected_gene': 'DKFZP434K028', 'score': 14.96}, {'connected_gene': 'SYT7', 'score': 10.73}, {'connected_gene': 'DAGLA', 'score': 0.44}, {'connected_gene': 'GC11M061648', 'score': 0.39}]
chr11	GH11I061729	61728594	61729350	0.46	[{'connected_gene': 'MYRF', 'score': 25.09}, {'connected_gene': 'DKFZP434K028', 'score': 12.23}, {'connected_gene': 'DAGLA', 'score': 11.27}, {'connected_gene': 'PIR41833', 'score': 0.39}]
chr11	GH11I061726	61726009	61726158	0.43	[{'connected_gene': 'MYRF', 'score': 12.23}, {'connected_gene': 'DKFZP434K028', 'score': 12.21}, {'connected_gene': 'DAGLA', 'score': 11.27}, {'connected_gene': 'PIR41833', 'score': 0.37}]
chr11	GH11I061745	61745709	61746636	0.66	[{'connected_gene': 'MYRF', 'score': 23.57}, {'connected_gene': 'PIR41833', 'score': 0.77}, {'connected_gene': 'DKFZP434K028', 'score': 0.39}, {'connected_gene': 'DAGLA', 'score': 0.2}]
chr11	GH11I061681	61681220	61684134	1.14	[{'connected_gene': 'MYRF', 'score': 21.99}, {'connected_gene': 'DKFZP434K028', 'score': 15.17}, {'connected_gene': 'DAGLA', 'score': 0.77}, {'connected_gene': 'PIR41833', 'score': 0.21}]
chr11	GH11I061728	61728067	61728578	0.38	[{'connected_gene': 'MYRF', 'score': 12.25}, {'connected_gene': 'DKFZP434K028', 'score': 12.23}, {'connected_gene': 'DAGLA', 'score': 11.27}, {'connected_gene': 'PIR41833', 'score': 0.37}]
chr11	GH11I061594	61594946	61596677	0.87	[{'connected_gene': 'MYRF', 'score': 10.48}, {'connected_gene': 'DKFZP434K028', 'score': 10.47}, {'connected_gene': 'SCGB1A1', 'score': 5.01}, {'connected_gene': 'LOC101927495', 'score': 0.44}, {'connected_gene': 'RPLP0P2', 'score': 0.37}]
chr11	GH11I061752	61752266	61759945	2.72	[{'connected_gene': 'MYRF', 'score': 569.06}, {'connected_gene': 'DKFZP434K028', 'score': 559.64}, {'connected_gene': 'TKFC', 'score': 1.5}, {'connected_gene': 'INCENP', 'score': 1.36}, {'connected_gene': 'GC11P061758', 'score': 0.77}]
chr11	GH11I061686	61686122	61687144	0.2	[{'connected_gene': 'MYRF', 'score': 12.26}, {'connected_gene': 'DKFZP434K028', 'score': 4.82}, {'connected_gene': 'VWCE', 'score': 4.72}, {'connected_gene': 'DAGLA', 'score': 0.44}, {'connected_gene': 'PIR41833', 'score': 0.22}]
chr11	GH11I061747	61747104	61748418	1.32	[{'connected_gene': 'MYRF', 'score': 24.07}, {'connected_gene': 'PIR41833', 'score': 0.77}, {'connected_gene': 'DKFZP434K028', 'score': 0.44}]
chr11	GH11I061749	61749435	61750338	1.08	[{'connected_gene': 'MYRF', 'score': 0.77}, {'connected_gene': 'PIR41833', 'score': 0.44}, {'connected_gene': 'DKFZP434K028', 'score': 0.44}]
chr11	GH11I061748	61748459	61749102	0.46	[{'connected_gene': 'MYRF', 'score': 5.5}, {'connected_gene': 'PIR41833', 'score': 0.77}, {'connected_gene': 'DKFZP434K028', 'score': 0.44}]
chr11	GH11I061751	61751941	61752214	0.6	[{'connected_gene': 'MYRF', 'score': 561.96}, {'connected_gene': 'PIR41833', 'score': 0.44}, {'connected_gene': 'DKFZP434K028', 'score': 0.44}]
chr11	GH11I061921	61921878	61925920	1.51	[{'connected_gene': 'RAB3IL1', 'score': 28.84}, {'connected_gene': 'FADS3', 'score': 11.96}, {'connected_gene': 'BEST1', 'score': 11.88}, {'connected_gene': 'FADS1', 'score': 10.66}, {'connected_gene': 'FTH1', 'score': 10.28}, {'connected_gene': 'DKFZP434K028', 'score': 9.35}, {'connected_gene': 'MYRF', 'score': 9.34}, {'connected_gene': 'GC11P061939', 'score': 0.39}, {'connected_gene': 'PIR40157', 'score': 0.37}]
chr11	GH11I061435	61435392	61436258	0.65	[{'connected_gene': 'TMEM216', 'score': 24.41}, {'connected_gene': 'MYRF', 'score': 10.15}, {'connected_gene': 'DKFZP434K028', 'score': 10.14}, {'connected_gene': 'SDHAF2', 'score': 6.84}, {'connected_gene': 'GC11P061443', 'score': 0.44}, {'connected_gene': 'ENSG00000256591', 'score': 0.44}]
chr11	GH11I061417	61417032	61419417	1	[{'connected_gene': 'TMEM216', 'score': 23.77}, {'connected_gene': 'DDB1', 'score': 11.24}, {'connected_gene': 'TKFC', 'score': 11.22}, {'connected_gene': 'MYRF', 'score': 9.36}, {'connected_gene': 'DKFZP434K028', 'score': 9.36}, {'connected_gene': 'SDHAF2', 'score': 7.47}, {'connected_gene': 'PIR40905', 'score': 0.77}, {'connected_gene': 'PIR50742', 'score': 0.39}, {'connected_gene': 'CPSF7', 'score': 0.39}]
chr11	GH11I062108	62108001	62110019	0.97	[{'connected_gene': 'INCENP', 'score': 13.93}, {'connected_gene': 'RAB3IL1', 'score': 11.55}, {'connected_gene': 'FADS3', 'score': 11.53}, {'connected_gene': 'BEST1', 'score': 11.16}, {'connected_gene': 'FTH1', 'score': 11.0}, {'connected_gene': 'FADS1', 'score': 10.78}, {'connected_gene': 'MYRF', 'score': 9.77}, {'connected_gene': 'DKFZP434K028', 'score': 9.77}, {'connected_gene': 'GC11M062088', 'score': 0.37}]
chr11	GH11I062104	62104194	62106688	1.35	[{'connected_gene': 'FTH1', 'score': 14.08}, {'connected_gene': 'INCENP', 'score': 13.68}, {'connected_gene': 'RAB3IL1', 'score': 11.56}, {'connected_gene': 'FADS3', 'score': 11.53}, {'connected_gene': 'BEST1', 'score': 11.16}, {'connected_gene': 'FADS1', 'score': 10.78}, {'connected_gene': 'MYRF', 'score': 9.77}, {'connected_gene': 'DKFZP434K028', 'score': 9.77}, {'connected_gene': 'DAGLA', 'score': 6.85}, {'connected_gene': 'GC11M062088', 'score': 0.39}]
chr11	GH11I061655	61655798	61656527	0.31	[{'connected_gene': 'ENSG00000255947', 'score': 550.77}, {'connected_gene': 'DKFZP434K028', 'score': 5.18}, {'connected_gene': 'GC11M061648', 'score': 0.77}]