PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr17	25621129	25621146	CAGE_peak_1_at_WSB1_5end
chr17	25635771	25635786	CAGE_peak_2_at_WSB1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr17	GH17I027528	27528071	27537416	1.77	[{'connected_gene': 'KSR1', 'score': 23.99}, {'connected_gene': 'LGALS9', 'score': 10.13}, {'connected_gene': 'WSB1', 'score': 3.84}, {'connected_gene': 'PIR50901', 'score': 0.77}, {'connected_gene': 'LOC100420848', 'score': 0.44}]
chr17	GH17I027501	27501834	27507440	1.49	[{'connected_gene': 'KSR1', 'score': 17.41}, {'connected_gene': 'LGALS9', 'score': 4.39}, {'connected_gene': 'WSB1', 'score': 3.99}, {'connected_gene': 'PIR42403', 'score': 0.37}, {'connected_gene': 'GC17M027476', 'score': 0.34}]
chr17	GH17I027455	27455351	27461064	1.99	[{'connected_gene': 'KSR1', 'score': 564.58}, {'connected_gene': 'WSB1', 'score': 1.35}, {'connected_gene': 'LGALS9', 'score': 1.22}, {'connected_gene': 'GC17M027459', 'score': 0.77}]
chr17	GH17I027470	27470849	27475955	2.01	[{'connected_gene': 'KSR1', 'score': 562.54}, {'connected_gene': 'SYPL1P2', 'score': 11.07}, {'connected_gene': 'WSB1', 'score': 1.69}, {'connected_gene': 'GC17M027476', 'score': 0.44}, {'connected_gene': 'PIR32283', 'score': 0.44}]
chr17	GH17I027488	27488201	27489973	1.28	[{'connected_gene': 'LGALS9', 'score': 9.69}, {'connected_gene': 'KSR1', 'score': 8.39}, {'connected_gene': 'WSB1', 'score': 7.43}, {'connected_gene': 'GC17M027476', 'score': 0.44}, {'connected_gene': 'PIR42403', 'score': 0.29}]
chr17	GH17I027595	27595317	27596354	0.38	[{'connected_gene': 'LGALS9', 'score': 17.59}, {'connected_gene': 'WSB1', 'score': 10.34}, {'connected_gene': 'PIR39350', 'score': 0.44}, {'connected_gene': 'PIR50901', 'score': 0.22}, {'connected_gene': 'KSR1', 'score': 0.12}]
chr17	GH17I027590	27590506	27595144	0.46	[{'connected_gene': 'LGALS9', 'score': 17.58}, {'connected_gene': 'WSB1', 'score': 10.21}, {'connected_gene': 'PIR39350', 'score': 0.39}, {'connected_gene': 'PIR50901', 'score': 0.22}, {'connected_gene': 'KSR1', 'score': 0.12}]
chr17	GH17I027565	27565895	27581229	1.69	[{'connected_gene': 'LGALS9', 'score': 17.96}, {'connected_gene': 'TMEM199', 'score': 13.34}, {'connected_gene': 'ITM2BP1', 'score': 12.18}, {'connected_gene': 'WSB1', 'score': 9.93}, {'connected_gene': 'PIR39350', 'score': 0.29}, {'connected_gene': 'PIR50901', 'score': 0.28}, {'connected_gene': 'KSR1', 'score': 0.13}]
chr17	GH17I027255	27255851	27257484	0.82	[{'connected_gene': 'WSB1', 'score': 12.09}, {'connected_gene': 'ENSG00000265246', 'score': 0.37}, {'connected_gene': 'RPL34P31', 'score': 0.37}]
chr17	GH17I027246	27246948	27248251	1.15	[{'connected_gene': 'WSB1', 'score': 24.95}, {'connected_gene': 'ENSG00000265246', 'score': 0.44}, {'connected_gene': 'RPL34P31', 'score': 0.31}]
chr17	GH17I027263	27263906	27265689	0.95	[{'connected_gene': 'WSB1', 'score': 12.06}, {'connected_gene': 'TBC1D3P5', 'score': 4.08}, {'connected_gene': 'RPL34P31', 'score': 0.44}, {'connected_gene': 'ENSG00000265246', 'score': 0.34}]
chr17	GH17I027597	27597603	27598780	0.65	[{'connected_gene': 'WSB1', 'score': 10.34}, {'connected_gene': 'LGALS9', 'score': 8.46}, {'connected_gene': 'PIR39350', 'score': 0.44}, {'connected_gene': 'PIR50901', 'score': 0.21}, {'connected_gene': 'KSR1', 'score': 0.11}]
chr17	GH17I027206	27206601	27207641	1.11	[{'connected_gene': 'WSB1', 'score': 4.31}, {'connected_gene': 'LGALS9', 'score': 2.99}, {'connected_gene': 'LOC105371704', 'score': 0.34}, {'connected_gene': 'LOC105371703', 'score': 0.13}]
chr17	GH17I027348	27348201	27350440	1.48	[{'connected_gene': 'WSB1', 'score': 15.81}, {'connected_gene': 'LGALS9', 'score': 1.97}, {'connected_gene': 'SYPL1P2', 'score': 0.77}, {'connected_gene': 'GC17M027350', 'score': 0.77}, {'connected_gene': 'ENSG00000266313', 'score': 0.37}]
chr17	GH17I027216	27216488	27219756	0.96	[{'connected_gene': 'WSB1', 'score': 8.01}, {'connected_gene': 'LOC105371704', 'score': 0.39}, {'connected_gene': 'LOC105371703', 'score': 0.13}]
chr17	GH17I027238	27237000	27237200	0.63	[{'connected_gene': 'WSB1', 'score': 24.84}, {'connected_gene': 'ENSG00000265246', 'score': 0.77}, {'connected_gene': 'LOC105371704', 'score': 0.44}]
chr17	GH17I027236	27236815	27236984	0.64	[{'connected_gene': 'WSB1', 'score': 12.1}, {'connected_gene': 'ENSG00000265246', 'score': 0.77}, {'connected_gene': 'LOC105371704', 'score': 0.44}]
chr17	GH17I027343	27343846	27347232	1.56	[{'connected_gene': 'WSB1', 'score': 16.26}, {'connected_gene': 'SYPL1P2', 'score': 4.97}, {'connected_gene': 'ENSG00000266313', 'score': 0.39}]
chr17	GH17I027336	27336201	27336761	0.83	[{'connected_gene': 'WSB1', 'score': 11.87}, {'connected_gene': 'ENSG00000266313', 'score': 0.77}, {'connected_gene': 'SYPL1P2', 'score': 0.37}]
chr17	GH17I027309	27309032	27311664	0.52	[{'connected_gene': 'WSB1', 'score': 6.28}, {'connected_gene': 'GC17P027315', 'score': 0.77}, {'connected_gene': 'PIR61936', 'score': 0.44}]
chr17	GH17I027231	27231316	27231669	0.39	[{'connected_gene': 'LOC105371704', 'score': 550.77}, {'connected_gene': 'WSB1', 'score': 11.52}, {'connected_gene': 'LOC105371703', 'score': 0.11}]
chr17	GH17I027351	27351551	27354929	2.02	[{'connected_gene': 'SYPL1P2', 'score': 550.77}, {'connected_gene': 'GC17M027350', 'score': 550.77}, {'connected_gene': 'WSB1', 'score': 14.31}, {'connected_gene': 'ITM2BP1', 'score': 12.64}, {'connected_gene': 'LGALS9', 'score': 1.58}]
chr17	GH17I027300	27300785	27306196	0.57	[{'connected_gene': 'PIR61936', 'score': 550.77}, {'connected_gene': 'WSB1', 'score': 4.79}, {'connected_gene': 'TBC1D3P5', 'score': 3.98}, {'connected_gene': 'PIR52156', 'score': 0.44}]
chr17	GH17I027281	27281201	27283968	1.28	[{'connected_gene': 'ENSG00000265453', 'score': 550.77}, {'connected_gene': 'WSB1', 'score': 8.77}, {'connected_gene': 'LGALS9', 'score': 5.14}, {'connected_gene': 'MIR4522', 'score': 0.39}]
chr17	GH17I027298	27298801	27300200	0.66	[{'connected_gene': 'PIR52156', 'score': 0.77}, {'connected_gene': 'PIR61936', 'score': 0.77}, {'connected_gene': 'WSB1', 'score': 0.44}]
chr17	GH17I027314	27314366	27316771	1.06	[{'connected_gene': 'GC17P027315', 'score': 550.77}, {'connected_gene': 'ENSG00000266313', 'score': 0.37}, {'connected_gene': 'WSB1', 'score': 0.34}]
chr17	GH17I027306	27306287	27307239	0.38	[{'connected_gene': 'PIR61936', 'score': 0.77}, {'connected_gene': 'GC17P027315', 'score': 0.44}, {'connected_gene': 'WSB1', 'score': 0.39}]
chr17	GH17I027307	27307688	27307945	0.6	[{'connected_gene': 'PIR61936', 'score': 0.77}, {'connected_gene': 'GC17P027315', 'score': 0.44}, {'connected_gene': 'WSB1', 'score': 0.39}]
chr17	GH17I027292	27292984	27297803	2.57	[{'connected_gene': 'PIR52156', 'score': 550.77}, {'connected_gene': 'MIR4522', 'score': 550.77}, {'connected_gene': 'WSB1', 'score': 550.77}, {'connected_gene': 'ITM2BP1', 'score': 11.96}, {'connected_gene': 'TBC1D3P5', 'score': 4.0}, {'connected_gene': 'PIR61936', 'score': 0.44}]
chr17	GH17I027237	27237856	27246622	1.58	[{'connected_gene': 'ENSG00000265246', 'score': 550.77}, {'connected_gene': 'ITM2BP1', 'score': 49.8}, {'connected_gene': 'WSB1', 'score': 31.44}, {'connected_gene': 'LGALS9', 'score': 6.36}, {'connected_gene': 'RPL34P31', 'score': 0.29}]
chr17	GH17I027331	27331315	27334627	2.05	[{'connected_gene': 'ENSG00000266313', 'score': 550.77}, {'connected_gene': 'ITM2BP1', 'score': 18.67}, {'connected_gene': 'WSB1', 'score': 14.67}, {'connected_gene': 'LGALS9', 'score': 2.26}, {'connected_gene': 'GC17P027315', 'score': 0.37}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000581440	[[25621101, 25621461], [25628792, 25628982], [25630392, 25630661], [25631805, 25631929]]	[[25621421, 25621461], [25628792, 25628982], [25630392, 25630661], [25631805, 25631929]]
ENST00000578312	[[25621105, 25621461], [25624212, 25624334], [25628813, 25628982], [25630392, 25630437]]	None
ENST00000262394	[[25621105, 25621461], [25628813, 25628982], [25630392, 25630661], [25631805, 25631937], [25633807, 25633908], [25636125, 25636298], [25637086, 25637200], [25638534, 25638642], [25639235, 25640657]]	[[25621421, 25621461], [25628813, 25628982], [25630392, 25630661], [25631805, 25631937], [25633807, 25633908], [25636125, 25636298], [25637086, 25637200], [25638534, 25638642], [25639235, 25639395]]
ENST00000583742	[[25621112, 25621461], [25628843, 25628982], [25630392, 25630448]]	[[25621421, 25621461], [25628843, 25628982], [25630392, 25630448]]
ENST00000467843	[[25621118, 25621461], [25628813, 25628982], [25630392, 25630661], [25631805, 25631937], [25633807, 25633908], [25634769, 25636298], [25637086, 25637200], [25638534, 25638642], [25639235, 25640657]]	None
ENST00000579733	[[25621128, 25621461], [25631805, 25631937], [25633807, 25633908], [25634769, 25635873]]	[[25621421, 25621461], [25631805, 25631937], [25633807, 25633908], [25634769, 25634793]]
ENST00000583193	[[25621137, 25621461], [25633807, 25633908], [25634769, 25634896]]	[[25621421, 25621461], [25633807, 25633908], [25634769, 25634793]]
ENST00000583786	[[25621139, 25621461], [25628817, 25628976]]	None
ENST00000584354	[[25621139, 25621461], [25628813, 25629035]]	None
ENST00000581185	[[25621139, 25621461], [25628813, 25628982], [25630392, 25630661], [25631805, 25631937], [25633807, 25634815]]	[[25621421, 25621461], [25628813, 25628982], [25630392, 25630661], [25631805, 25631937], [25633807, 25633941]]
ENST00000427287	[[25621139, 25621461], [25628906, 25628982], [25630392, 25630661], [25631805, 25631937], [25633807, 25633908], [25634769, 25635018]]	[[25621421, 25621461], [25628906, 25628982], [25630392, 25630661], [25631805, 25631937], [25633807, 25633908], [25634769, 25634793]]
ENST00000581089	[[25621147, 25621461], [25630392, 25630775]]	None
ENST00000348811	[[25621156, 25621461], [25631805, 25631937], [25633807, 25633908], [25636125, 25636298], [25637086, 25637200], [25638534, 25638642], [25639235, 25639913]]	[[25621421, 25621461], [25631805, 25631937], [25633807, 25633908], [25636125, 25636298], [25637086, 25637200], [25638534, 25638642], [25639235, 25639395]]
ENST00000582208	[[25621214, 25621461], [25628813, 25628982], [25631805, 25631937], [25633807, 25633884]]	[[25621421, 25621461], [25628813, 25628982], [25631805, 25631821]]
ENST00000584114	[[25621371, 25621461], [25631805, 25631937], [25633807, 25633908], [25636125, 25636281]]	[[25621421, 25621461], [25631805, 25631937], [25633807, 25633908], [25636125, 25636281]]
ENST00000487603	[[25629460, 25630661], [25631805, 25631937], [25633807, 25633908], [25634769, 25635233]]	None
ENST00000583096	[[25630345, 25630661], [25631805, 25631937], [25633807, 25633908], [25636125, 25636298], [25637086, 25637198]]	None
NM_134265	[[25621105, 25621461], [25631805, 25631937], [25633807, 25633908], [25636125, 25636298], [25637086, 25637200], [25638534, 25638642], [25639235, 25640645]]	[[25621421, 25621461], [25631805, 25631937], [25633807, 25633908], [25636125, 25636298], [25637086, 25637200], [25638534, 25638642], [25639235, 25639395]]
NM_015626	[[25621105, 25621461], [25628813, 25628982], [25630392, 25630661], [25631805, 25631937], [25633807, 25633908], [25636125, 25636298], [25637086, 25637200], [25638534, 25638642], [25639235, 25640645]]	[[25621421, 25621461], [25628813, 25628982], [25630392, 25630661], [25631805, 25631937], [25633807, 25633908], [25636125, 25636298], [25637086, 25637200], [25638534, 25638642], [25639235, 25639395]]