PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000367833	[[168148170, 168148419], [168153139, 168153319], [168154016, 168154116], [168160606, 168160738], [168165784, 168165880], [168168156, 168168219], [168169140, 168169950]]	[[168148315, 168148419], [168153139, 168153319], [168154016, 168154116], [168160606, 168160738], [168165784, 168165880], [168168156, 168168219], [168169140, 168169284]]
ENST00000367830	[[168148292, 168148419], [168153139, 168153319], [168154016, 168154116], [168160606, 168160738], [168161445, 168161633]]	[[168148315, 168148419], [168153139, 168153319], [168154016, 168154116], [168160606, 168160738], [168161445, 168161466]]
NM_152902	[[168148082, 168148419], [168153139, 168153319], [168154016, 168154116], [168160606, 168160738], [168165784, 168165880], [168168156, 168168219], [168169140, 168171352]]	[[168148315, 168148419], [168153139, 168153319], [168154016, 168154116], [168160606, 168160738], [168165784, 168165880], [168168156, 168168219], [168169140, 168169284]]
NM_001031800	[[168148082, 168148419], [168153139, 168153319], [168154016, 168154116], [168160606, 168160738], [168161445, 168161633]]	[[168148315, 168148419], [168153139, 168153319], [168154016, 168154116], [168160606, 168160738], [168161445, 168161466]]

Promoter

Chrom	Start	End	Description
chr1	168148169	168148221	CAGE_peak_1_at_TIPRL_5end
chr1	168148230	168148263	CAGE_peak_2_at_TIPRL_5end
chr1	168148273	168148292	CAGE_peak_3_at_TIPRL_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I167718	167718603	167723680	2.42	[{'connected_gene': 'MPZL1', 'score': 558.33}, {'connected_gene': 'GC01M167719', 'score': 550.77}, {'connected_gene': 'ENSG00000232194', 'score': 10.69}, {'connected_gene': 'ENSG00000250762', 'score': 10.69}, {'connected_gene': 'TIPRL', 'score': 10.29}]
chr1	GH01I167875	167875160	167875832	0.46	[{'connected_gene': 'ADCY10', 'score': 11.29}, {'connected_gene': 'MPC2', 'score': 7.26}, {'connected_gene': 'TIPRL', 'score': 4.72}, {'connected_gene': 'GC01P167854', 'score': 0.34}]
chr1	GH01I168708	168708213	168710954	1.07	[{'connected_gene': 'C1orf112', 'score': 24.75}, {'connected_gene': 'TIPRL', 'score': 10.27}, {'connected_gene': 'LOC101928596', 'score': 9.75}, {'connected_gene': 'ATP1B1', 'score': 9.75}, {'connected_gene': 'CCDC181', 'score': 5.34}, {'connected_gene': 'DPT', 'score': 5.22}, {'connected_gene': 'GC01M168701', 'score': 0.39}, {'connected_gene': 'LOC105371604', 'score': 0.26}]
chr1	GH01I168225	168225003	168229211	2.07	[{'connected_gene': 'SFT2D2', 'score': 550.77}, {'connected_gene': 'TBX19', 'score': 17.5}, {'connected_gene': 'RNU6-1310P', 'score': 11.43}, {'connected_gene': 'TIPRL', 'score': 10.84}, {'connected_gene': 'MPZL1', 'score': 10.7}, {'connected_gene': 'GC01P168246', 'score': 0.37}, {'connected_gene': 'PIR32870', 'score': 0.37}, {'connected_gene': 'GC01M168113', 'score': 0.09}]
chr1	GH01I168177	168177846	168180792	2.37	[{'connected_gene': 'TIPRL', 'score': 561.68}, {'connected_gene': 'MPZL1', 'score': 31.53}, {'connected_gene': 'POU2F1', 'score': 10.39}, {'connected_gene': 'GPR161', 'score': 7.47}, {'connected_gene': 'MPC2', 'score': 5.24}, {'connected_gene': 'RPL34P1', 'score': 0.29}, {'connected_gene': 'GC01M168113', 'score': 0.08}]
chr1	GH01I168145	168145401	168146619	0.94	[{'connected_gene': 'TIPRL', 'score': 22.58}, {'connected_gene': 'SFT2D2', 'score': 10.03}, {'connected_gene': 'MPZL1', 'score': 9.73}, {'connected_gene': 'TBX19', 'score': 9.5}, {'connected_gene': 'GPR161', 'score': 0.44}, {'connected_gene': 'GC01M168113', 'score': 0.07}]
chr1	GH01I168202	168202530	168204098	0.94	[{'connected_gene': 'TIPRL', 'score': 23.65}, {'connected_gene': 'SFT2D2', 'score': 12.49}, {'connected_gene': 'MPC2', 'score': 5.35}, {'connected_gene': 'RPL34P1', 'score': 0.44}, {'connected_gene': 'GC01M168113', 'score': 0.08}]
chr1	GH01I168146	168146723	168146872	0.52	[{'connected_gene': 'TIPRL', 'score': 11.02}, {'connected_gene': 'GPR161', 'score': 0.44}, {'connected_gene': 'GC01M168113', 'score': 0.07}]
chr1	GH01I168148	168148801	168149315	0.38	[{'connected_gene': 'TIPRL', 'score': 18.09}, {'connected_gene': 'GPR161', 'score': 0.39}, {'connected_gene': 'GC01M168113', 'score': 0.07}]
chr1	GH01I168121	168121072	168122352	1.01	[{'connected_gene': 'GPR161', 'score': 550.37}, {'connected_gene': 'TBX19', 'score': 9.3}, {'connected_gene': 'MPC2', 'score': 7.87}, {'connected_gene': 'TIPRL', 'score': 4.93}, {'connected_gene': 'GC01M168079', 'score': 0.26}, {'connected_gene': 'GC01M168113', 'score': 0.06}]
chr1	GH01I168135	168135589	168137870	1.87	[{'connected_gene': 'GPR161', 'score': 550.77}, {'connected_gene': 'TIPRL', 'score': 19.96}, {'connected_gene': 'SFT2D2', 'score': 10.47}, {'connected_gene': 'MPC2', 'score': 6.69}, {'connected_gene': 'GC01M168079', 'score': 0.22}, {'connected_gene': 'GC01M168113', 'score': 0.07}]
chr1	GH01I168091	168091999	168092505	0.31	[{'connected_gene': 'GPR161', 'score': 11.46}, {'connected_gene': 'TIPRL', 'score': 11.01}, {'connected_gene': 'GC01M168079', 'score': 0.39}]
chr1	GH01I168093	168093103	168093252	0.6	[{'connected_gene': 'GPR161', 'score': 11.48}, {'connected_gene': 'TIPRL', 'score': 11.01}, {'connected_gene': 'GC01M168079', 'score': 0.39}]