PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000355619	[[77579388, 77581923], [77589543, 77589715], [77592734, 77592857], [77595647, 77595996], [77600961, 77601285]]	[[77581279, 77581923], [77589543, 77589715], [77592734, 77592857]]
ENST00000417323	[[77581699, 77581923], [77589543, 77589715], [77592734, 77592857], [77595791, 77595996], [77600961, 77601330]]	[[77581699, 77581923], [77589543, 77589715], [77592734, 77592857]]
ENST00000472949	[[77589645, 77589715], [77600961, 77601220]]	None
ENST00000485797	[[77566739, 77567086], [77589543, 77589716]]	None
ENST00000477982	[[77575695, 77576184], [77589543, 77589715], [77592734, 77592821]]	None
ENST00000470210	[[77589299, 77589715], [77592734, 77592879]]	None
NM_012158	[[77579388, 77581923], [77589543, 77589715], [77592734, 77592857], [77595647, 77595996], [77600961, 77601331]]	[[77581279, 77581923], [77589543, 77589715], [77592734, 77592857]]

Promoter

Chrom	Start	End	Description
chr13	77601282	77601308	CAGE_peak_1_at_FBXL3_5end
chr13	77601327	77601334	CAGE_peak_2_at_FBXL3_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I077316	77316401	77316800	0.4	[{'connected_gene': 'FBXL3', 'score': 4.51}, {'connected_gene': 'MYCBP2', 'score': 0.39}, {'connected_gene': 'GC13P077273', 'score': 0.26}]
chr13	GH13I077025	77025099	77028582	2	[{'connected_gene': 'FBXL3', 'score': 564.99}, {'connected_gene': 'MYCBP2-AS1', 'score': 555.89}, {'connected_gene': 'ENSG00000274898', 'score': 550.77}, {'connected_gene': 'MYCBP2-AS2', 'score': 12.13}, {'connected_gene': 'CLN5', 'score': 9.74}, {'connected_gene': 'ENSG00000283208', 'score': 0.29}]
chr13	GH13I077324	77324747	77327861	2.51	[{'connected_gene': 'MYCBP2', 'score': 556.43}, {'connected_gene': 'CLN5', 'score': 4.41}, {'connected_gene': 'FBXL3', 'score': 4.11}, {'connected_gene': 'KCTD12', 'score': 1.46}, {'connected_gene': 'GC13P077273', 'score': 0.23}]
chr13	GH13I076936	76936867	76938294	0.69	[{'connected_gene': 'CLN5', 'score': 5.23}, {'connected_gene': 'FBXL3', 'score': 4.31}, {'connected_gene': 'BTF3P11', 'score': 0.44}, {'connected_gene': 'LOC105370269', 'score': 0.44}]
chr13	GH13I077345	77345000	77345971	1.22	[{'connected_gene': 'CLN5', 'score': 5.5}, {'connected_gene': 'MYCBP2', 'score': 5.31}, {'connected_gene': 'FBXL3', 'score': 2.35}, {'connected_gene': 'LOC105370271', 'score': 0.13}]
chr13	GH13I076878	76878790	76881399	0.88	[{'connected_gene': 'KCTD12', 'score': 6.55}, {'connected_gene': 'FBXL3', 'score': 1.43}, {'connected_gene': 'LOC105370265', 'score': 0.19}]
chr13	GH13I076820	76820138	76821566	0.31	[{'connected_gene': 'KCTD12', 'score': 11.32}, {'connected_gene': 'FBXL3', 'score': 4.12}, {'connected_gene': 'LOC105370265', 'score': 0.39}]
chr13	GH13I077022	77022201	77022800	0.46	[{'connected_gene': 'MYCBP2-AS2', 'score': 11.57}, {'connected_gene': 'FBXL3', 'score': 11.05}, {'connected_gene': 'MYCBP2', 'score': 9.93}, {'connected_gene': 'MYCBP2-AS1', 'score': 0.77}, {'connected_gene': 'ENSG00000283208', 'score': 0.29}]
chr13	GH13I077023	77023801	77024000	0.2	[{'connected_gene': 'MYCBP2-AS1', 'score': 0.77}, {'connected_gene': 'FBXL3', 'score': 0.77}, {'connected_gene': 'ENSG00000283208', 'score': 0.29}]
chr13	GH13I076980	76980001	76980600	1	[{'connected_gene': 'GC13M076982', 'score': 550.77}, {'connected_gene': 'RPL7P44', 'score': 550.77}, {'connected_gene': 'FBXL3', 'score': 10.31}, {'connected_gene': 'ACOD1', 'score': 0.29}]
chr13	GH13I076990	76990862	76994621	1.53	[{'connected_gene': 'ENSG00000283208', 'score': 550.77}, {'connected_gene': 'FBXL3', 'score': 14.5}, {'connected_gene': 'CLN5', 'score': 13.66}, {'connected_gene': 'MYCBP2-AS1', 'score': 0.29}]