PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000180166	[[16849677, 16850826], [16853163, 16853267], [16859255, 16859690]]	[[16850580, 16850826], [16853163, 16853267], [16859255, 16859541]]
ENST00000519941	[[16850486, 16850826], [16859255, 16859349]]	[[16850580, 16850826], [16859255, 16859349]]
NM_019851	[[16850333, 16850826], [16853163, 16853267], [16859255, 16859674]]	[[16850580, 16850826], [16853163, 16853267], [16859255, 16859541]]

Promoter

Chrom	Start	End	Description
chr8	16859835	16859861	CAGE_peak_1_at_FGF20_5end
chr8	16860160	16860190	CAGE_peak_2_at_FGF20_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I017640	17640721	17643360	0.31	[{'connected_gene': 'MTUS1', 'score': 5.18}, {'connected_gene': 'FGF20', 'score': 5.08}, {'connected_gene': 'PDGFRL', 'score': 4.52}, {'connected_gene': 'MIR548V', 'score': 0.28}, {'connected_gene': 'ENSG00000277466', 'score': 0.25}]
chr8	GH08I016779	16779932	16780201	0.8	[{'connected_gene': 'ZDHHC2', 'score': 10.8}, {'connected_gene': 'FGF20', 'score': 9.83}, {'connected_gene': 'GC08M016771', 'score': 0.77}, {'connected_gene': 'GC08P016788', 'score': 0.44}, {'connected_gene': 'ENSG00000253496', 'score': 0.12}]
chr8	GH08I016997	16997372	16997521	0.31	[{'connected_gene': 'ZDHHC2', 'score': 10.4}, {'connected_gene': 'FGF20', 'score': 0.77}, {'connected_gene': 'GC08M016968', 'score': 0.34}]
chr8	GH08I017613	17613010	17620599	1.42	[{'connected_gene': 'MICU3', 'score': 32.59}, {'connected_gene': 'PCM1', 'score': 23.58}, {'connected_gene': 'PDGFRL', 'score': 17.19}, {'connected_gene': 'ENSG00000249258', 'score': 10.94}, {'connected_gene': 'MTUS1', 'score': 6.6}, {'connected_gene': 'FGF20', 'score': 4.55}, {'connected_gene': 'ENSG00000277466', 'score': 0.34}, {'connected_gene': 'MIR548V', 'score': 0.21}]
chr8	GH08I017050	17050805	17054165	0.9	[{'connected_gene': 'MICU3', 'score': 19.03}, {'connected_gene': 'FGF20', 'score': 11.17}, {'connected_gene': 'GC08P017125', 'score': 0.19}]
chr8	GH08I017012	17012923	17013640	0.69	[{'connected_gene': 'MICU3', 'score': 0.39}, {'connected_gene': 'FGF20', 'score': 0.39}]
chr8	GH08I016837	16837308	16839301	0.46	[{'connected_gene': 'FGF20', 'score': 11.0}, {'connected_gene': 'ZDHHC2', 'score': 10.69}, {'connected_gene': 'GC08M016797', 'score': 0.34}, {'connected_gene': 'RN7SL474P', 'score': 0.31}, {'connected_gene': 'LOC105379297', 'score': 0.18}, {'connected_gene': 'ENSG00000253496', 'score': 0.18}]
chr8	GH08I017049	17049532	17050038	0.73	[{'connected_gene': 'FGF20', 'score': 11.08}, {'connected_gene': 'MICU3', 'score': 5.57}, {'connected_gene': 'GC08P017125', 'score': 0.18}]
chr8	GH08I017000	17000601	17002731	1.8	[{'connected_gene': 'FGF20', 'score': 558.08}, {'connected_gene': 'GC08M016968', 'score': 0.31}]