PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000367225	[[153325593, 153332897], [153345396, 153345631], [153347588, 153347678], [153365034, 153365178]]	[[153332708, 153332897], [153345396, 153345631], [153347588, 153347678], [153365034, 153365153]]
ENST00000206262	[[153331856, 153332897], [153345396, 153345631], [153347588, 153347678], [153365034, 153365178], [153452258, 153452384]]	[[153332708, 153332897], [153345396, 153345631], [153347588, 153347678], [153365034, 153365153]]
NM_012419	[[153332025, 153332897], [153345396, 153345631], [153347588, 153347678], [153365034, 153365178], [153452258, 153452389]]	[[153332708, 153332897], [153345396, 153345631], [153347588, 153347678], [153365034, 153365153]]

Promoter

Chrom	Start	End	Description
chr6	153452356	153452433	CAGE_peak_1_at_RGS17_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I153032	153032366	153032495	0.43	[{'connected_gene': 'MTRF1L', 'score': 12.63}, {'connected_gene': 'PIR48130', 'score': 0.44}, {'connected_gene': 'RGS17', 'score': 0.15}]
chr6	GH06I153101	153101541	153101800	0.29	[{'connected_gene': 'RGS17', 'score': 11.03}, {'connected_gene': 'MTRF1L', 'score': 1.99}, {'connected_gene': 'PIR48130', 'score': 0.18}]
chr6	GH06I153089	153089855	153093614	1.22	[{'connected_gene': 'RGS17', 'score': 17.95}, {'connected_gene': 'MTRF1L', 'score': 6.01}, {'connected_gene': 'PIR48130', 'score': 0.2}]
chr6	GH06I153036	153036963	153037021	0.26	[{'connected_gene': 'RGS17', 'score': 2.23}, {'connected_gene': 'SYNE1', 'score': 1.46}, {'connected_gene': 'PIR48130', 'score': 0.39}]
chr6	GH06I153166	153166153	153169666	0.85	[{'connected_gene': 'RGS17', 'score': 6.11}, {'connected_gene': 'RNA5SP224', 'score': 0.44}, {'connected_gene': 'ENSG00000213121', 'score': 0.21}]
chr6	GH06I153129	153129757	153132161	1.81	[{'connected_gene': 'RGS17', 'score': 550.77}, {'connected_gene': 'GC06P153131', 'score': 550.77}, {'connected_gene': 'PIR48130', 'score': 0.15}]
chr6	GH06I153099	153099601	153100000	0.31	[{'connected_gene': 'RGS17', 'score': 0.29}, {'connected_gene': 'PIR48130', 'score': 0.19}]
chr6	GH06I153059	153059399	153060495	0.31	[{'connected_gene': 'RGS17', 'score': 10.15}, {'connected_gene': 'PIR48130', 'score': 0.29}]
chr6	GH06I153074	153074001	153074400	0.2	[{'connected_gene': 'RGS17', 'score': 14.86}, {'connected_gene': 'PIR48130', 'score': 0.25}]
chr6	GH06I153084	153084446	153084595	0.31	[{'connected_gene': 'RGS17', 'score': 0.25}, {'connected_gene': 'PIR48130', 'score': 0.22}]
chr6	GH06I153117	153117999	153119509	0.93	[{'connected_gene': 'RGS17', 'score': 18.04}, {'connected_gene': 'PIR48130', 'score': 0.16}]
chr6	GH06I153110	153110945	153111443	0.2	[{'connected_gene': 'RGS17', 'score': 19.09}, {'connected_gene': 'PIR48130', 'score': 0.18}]
chr6	GH06I153786	153786786	153786895	0.68	[{'connected_gene': 'FBXO5', 'score': 54.85}, {'connected_gene': 'SCAF8', 'score': 54.06}, {'connected_gene': 'RGS17', 'score': 11.36}, {'connected_gene': 'RPL27AP6', 'score': 10.93}, {'connected_gene': 'RNU6-896P', 'score': 0.14}, {'connected_gene': 'GC06M153939', 'score': 0.1}]
chr6	GH06I153024	153024526	153024695	0.7	[{'connected_gene': 'PIR48130', 'score': 550.77}, {'connected_gene': 'VIP', 'score': 9.67}, {'connected_gene': 'MTRF1L', 'score': 0.34}, {'connected_gene': 'RGS17', 'score': 0.14}]
chr6	GH06I153038	153038041	153039170	0.2	[{'connected_gene': 'ENSG00000213121', 'score': 11.36}, {'connected_gene': 'PIR48130', 'score': 0.39}, {'connected_gene': 'RGS17', 'score': 0.16}]