PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000544008	[[69061617, 69062043], [69156277, 69156450]]	None
ENST00000544781	[[69066740, 69066895], [69156277, 69156446], [69181510, 69181771]]	None
ENST00000441339	[[69061604, 69062043], [69062699, 69062962], [69063058, 69064352]]	[[69062821, 69062962], [69063058, 69063859]]
ENST00000539691	[[69061621, 69062043], [69063106, 69063317]]	None
ENST00000308946	[[69061621, 69062043], [69062793, 69062962], [69063058, 69064754]]	[[69062821, 69062962], [69063058, 69063859]]
ENST00000535407	[[69061624, 69062043], [69062867, 69064754]]	[[69063091, 69063859]]
ENST00000535653	[[69061630, 69062043], [69062699, 69064754]]	None
ENST00000540760	[[69061640, 69062043], [69062867, 69062962], [69063058, 69063129]]	None
ENST00000535597	[[69063052, 69063106], [69063366, 69063638]]	None
ENST00000535660	[[69084298, 69084392], [69156277, 69156445]]	None
ENST00000541137	[[69152127, 69152204], [69156277, 69156446], [69181510, 69181634], [69181806, 69181880], [69182062, 69182494]]	None
ENST00000540356	[[69156323, 69156446], [69181510, 69181634], [69181806, 69181880], [69182062, 69182183]]	None
NM_001300924	[[69061604, 69062043], [69063058, 69064754]]	[[69063091, 69063859]]
NM_001300923	[[69061604, 69062043], [69062867, 69062962], [69063058, 69064754]]	[[69063091, 69063859]]
NM_001293296	[[69061604, 69062043], [69062867, 69064754]]	[[69063091, 69063859]]
NM_138768	[[69061604, 69062043], [69062793, 69062962], [69063058, 69064754]]	[[69062821, 69062962], [69063058, 69063859]]
NM_001293291	[[69061604, 69062043], [69062699, 69062962], [69063058, 69064754]]	[[69062821, 69062962], [69063058, 69063859]]
NM_001293294	[[69061604, 69062043], [69062699, 69064754]]	[[69063091, 69063859]]

Promoter

Chrom	Start	End	Description
chr11	69061580	69061585	CAGE_peak_5_at_MYEOV_5end
chr11	69061594	69061635	CAGE_peak_1_at_MYEOV_5end
chr11	69061636	69061648	CAGE_peak_3_at_MYEOV_5end
chr11	69066270	69066280	CAGE_peak_4_at_MYEOV_5end
chr11	69066653	69066687	CAGE_peak_2_at_MYEOV_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I069355	69355387	69357549	0.81	[{'connected_gene': 'PPP6R3', 'score': 28.37}, {'connected_gene': 'ORAOV1', 'score': 23.91}, {'connected_gene': 'MYEOV', 'score': 23.03}, {'connected_gene': 'MRGPRF', 'score': 18.54}, {'connected_gene': 'ENSG00000260808', 'score': 13.88}, {'connected_gene': 'TPCN2', 'score': 12.98}, {'connected_gene': 'MRGPRF-AS1', 'score': 11.58}, {'connected_gene': 'FADD', 'score': 11.4}, {'connected_gene': 'ENSG00000261625', 'score': 11.02}, {'connected_gene': 'ANO1', 'score': 9.95}, {'connected_gene': 'GC11P069370', 'score': 0.39}, {'connected_gene': 'IFITM9P', 'score': 0.23}, {'connected_gene': 'LOC105369370', 'score': 0.22}]
chr11	GH11I069290	69290269	69291443	0.78	[{'connected_gene': 'PPP6R3', 'score': 54.88}, {'connected_gene': 'ORAOV1', 'score': 51.86}, {'connected_gene': 'MRGPRF-AS1', 'score': 32.97}, {'connected_gene': 'TPCN2', 'score': 31.53}, {'connected_gene': 'ENSG00000260808', 'score': 26.03}, {'connected_gene': 'MRGPRF', 'score': 13.47}, {'connected_gene': 'ENSG00000261625', 'score': 13.07}, {'connected_gene': 'PPFIA1', 'score': 11.53}, {'connected_gene': 'IGHMBP2', 'score': 11.51}, {'connected_gene': 'MYEOV', 'score': 0.77}, {'connected_gene': 'GC11M069240', 'score': 0.34}]
chr11	GH11I069304	69304834	69304983	0.51	[{'connected_gene': 'IFITM9P', 'score': 550.77}, {'connected_gene': 'ORAOV1', 'score': 10.07}, {'connected_gene': 'LOC105369370', 'score': 0.44}, {'connected_gene': 'MYEOV', 'score': 0.39}, {'connected_gene': 'GC11P069370', 'score': 0.2}]
chr11	GH11I069326	69326913	69327062	0.2	[{'connected_gene': 'IFITM9P', 'score': 0.34}, {'connected_gene': 'LOC105369370', 'score': 0.31}, {'connected_gene': 'MYEOV', 'score': 0.29}, {'connected_gene': 'GC11P069370', 'score': 0.26}]
chr11	GH11I070117	70117328	70117887	0.2	[{'connected_gene': 'MYEOV', 'score': 4.26}, {'connected_gene': 'ENSG00000255143', 'score': 0.39}, {'connected_gene': 'ANO1', 'score': 0.28}]
chr11	GH11I069336	69336673	69338200	0.92	[{'connected_gene': 'MYEOV', 'score': 26.6}, {'connected_gene': 'IFITM9P', 'score': 0.29}, {'connected_gene': 'GC11P069370', 'score': 0.29}, {'connected_gene': 'LOC105369370', 'score': 0.28}]
chr11	GH11I069359	69359832	69360953	0.93	[{'connected_gene': 'MYEOV', 'score': 18.02}, {'connected_gene': 'GC11P069370', 'score': 0.44}, {'connected_gene': 'IFITM9P', 'score': 0.22}, {'connected_gene': 'LOC105369370', 'score': 0.21}]
chr11	GH11I069317	69317040	69318859	0.66	[{'connected_gene': 'MYEOV', 'score': 21.7}, {'connected_gene': 'IFITM9P', 'score': 0.39}, {'connected_gene': 'LOC105369370', 'score': 0.37}, {'connected_gene': 'GC11P069370', 'score': 0.23}]
chr11	GH11I069381	69381451	69383388	1.38	[{'connected_gene': 'MYEOV', 'score': 3.32}, {'connected_gene': 'ORAOV1', 'score': 2.15}, {'connected_gene': 'PIR51587', 'score': 0.77}, {'connected_gene': 'ENSG00000260877', 'score': 0.39}]
chr11	GH11I069293	69292454	69292603	0.97	[{'connected_gene': 'MYEOV', 'score': 550.77}, {'connected_gene': 'ORAOV1', 'score': 9.91}, {'connected_gene': 'GC11M069240', 'score': 0.34}]
chr11	GH11I069307	69307921	69313695	1.3	[{'connected_gene': 'MYEOV', 'score': 8.68}, {'connected_gene': 'TPCN2', 'score': 6.07}, {'connected_gene': 'ENSG00000260877', 'score': 4.97}, {'connected_gene': 'MRPL21', 'score': 4.68}, {'connected_gene': 'PPP6R3', 'score': 4.29}, {'connected_gene': 'IGHMBP2', 'score': 1.29}, {'connected_gene': 'IFITM9P', 'score': 0.44}, {'connected_gene': 'LOC105369370', 'score': 0.39}, {'connected_gene': 'GC11P069370', 'score': 0.22}]
chr11	GH11I069350	69350764	69354252	1.19	[{'connected_gene': 'MYEOV', 'score': 10.87}, {'connected_gene': 'MRPL21', 'score': 4.6}, {'connected_gene': 'GC11P069370', 'score': 0.37}, {'connected_gene': 'IFITM9P', 'score': 0.25}, {'connected_gene': 'LOC105369370', 'score': 0.23}]
chr11	GH11I069318	69318946	69322800	1.26	[{'connected_gene': 'MYEOV', 'score': 39.83}, {'connected_gene': 'MRGPRD', 'score': 1.25}, {'connected_gene': 'IFITM9P', 'score': 0.37}, {'connected_gene': 'LOC105369370', 'score': 0.34}, {'connected_gene': 'GC11P069370', 'score': 0.25}]
chr11	GH11I069292	69292828	69304385	2.31	[{'connected_gene': 'MYEOV', 'score': 550.77}, {'connected_gene': 'LOC105369370', 'score': 550.77}, {'connected_gene': 'ORAOV1', 'score': 53.11}, {'connected_gene': 'TPCN2', 'score': 32.88}, {'connected_gene': 'PPP6R3', 'score': 31.91}, {'connected_gene': 'ENSG00000260808', 'score': 22.89}, {'connected_gene': 'FADD', 'score': 19.91}, {'connected_gene': 'IGHMBP2', 'score': 14.28}, {'connected_gene': 'LRP5', 'score': 10.2}, {'connected_gene': 'ANO1', 'score': 9.95}, {'connected_gene': 'MRGPRF-AS1', 'score': 9.81}, {'connected_gene': 'MRGPRF', 'score': 9.78}, {'connected_gene': 'ENSG00000260877', 'score': 5.06}, {'connected_gene': 'LOC338694', 'score': 4.39}, {'connected_gene': 'IFITM9P', 'score': 0.44}]
chr11	GH11I069402	69402566	69402875	0.46	[{'connected_gene': 'MYEOV', 'score': 5.8}, {'connected_gene': 'ENSG00000259854', 'score': 0.39}, {'connected_gene': 'PIR51587', 'score': 0.37}]
chr11	GH11I069273	69273699	69275471	1.28	[{'connected_gene': 'ORAOV1', 'score': 32.22}, {'connected_gene': 'PPP6R3', 'score': 31.15}, {'connected_gene': 'ENSG00000260808', 'score': 22.96}, {'connected_gene': 'TPCN2', 'score': 20.96}, {'connected_gene': 'FADD', 'score': 11.4}, {'connected_gene': 'MRGPRF-AS1', 'score': 11.34}, {'connected_gene': 'IGHMBP2', 'score': 10.53}, {'connected_gene': 'LRP5', 'score': 10.2}, {'connected_gene': 'ANO1', 'score': 9.95}, {'connected_gene': 'MRGPRF', 'score': 9.79}, {'connected_gene': 'GC11M069240', 'score': 0.77}, {'connected_gene': 'MYEOV', 'score': 0.37}]
chr11	GH11I069305	69305842	69307096	0.56	[{'connected_gene': 'ORAOV1', 'score': 10.07}, {'connected_gene': 'LOC338694', 'score': 4.86}, {'connected_gene': 'ENSG00000260877', 'score': 4.82}, {'connected_gene': 'IFITM9P', 'score': 0.77}, {'connected_gene': 'LOC105369370', 'score': 0.44}, {'connected_gene': 'MYEOV', 'score': 0.39}, {'connected_gene': 'GC11P069370', 'score': 0.21}]
chr11	GH11I069286	69286730	69289829	1.34	[{'connected_gene': 'ORAOV1', 'score': 9.92}, {'connected_gene': 'MYEOV', 'score': 0.44}, {'connected_gene': 'GC11M069240', 'score': 0.37}]
chr11	GH11I069340	69340121	69340337	0.33	[{'connected_gene': 'ORAOV1', 'score': 9.61}, {'connected_gene': 'TPCN2', 'score': 5.49}, {'connected_gene': 'IGHMBP2', 'score': 1.17}, {'connected_gene': 'GC11P069370', 'score': 0.31}, {'connected_gene': 'IFITM9P', 'score': 0.28}, {'connected_gene': 'LOC105369370', 'score': 0.26}, {'connected_gene': 'MYEOV', 'score': 0.25}]
chr11	GH11I069270	69270967	69272191	0.66	[{'connected_gene': 'GC11M069240', 'score': 550.77}, {'connected_gene': 'MYEOV', 'score': 12.45}, {'connected_gene': 'PPFIA1', 'score': 9.97}, {'connected_gene': 'MRGPRF-AS1', 'score': 5.06}, {'connected_gene': 'CCND1', 'score': 4.75}]
chr11	GH11I069268	69268367	69269177	0.2	[{'connected_gene': 'GC11M069240', 'score': 550.77}, {'connected_gene': 'MYEOV', 'score': 12.42}, {'connected_gene': 'ORAOV1', 'score': 9.95}, {'connected_gene': 'LOC105369368', 'score': 0.29}]
chr11	GH11I069269	69269891	69270614	0.31	[{'connected_gene': 'GC11M069240', 'score': 550.77}, {'connected_gene': 'MYEOV', 'score': 12.45}, {'connected_gene': 'MRGPRD', 'score': 4.43}]
chr11	GH11I069275	69275792	69276111	0.2	[{'connected_gene': 'GC11M069240', 'score': 0.44}, {'connected_gene': 'MYEOV', 'score': 0.37}]
chr11	GH11I069276	69276641	69278903	1.02	[{'connected_gene': 'GC11M069240', 'score': 0.44}, {'connected_gene': 'MYEOV', 'score': 0.37}]
chr11	GH11I069280	69280139	69282247	0.99	[{'connected_gene': 'GC11M069240', 'score': 0.39}, {'connected_gene': 'MYEOV', 'score': 0.39}]
chr11	GH11I069279	69279527	69280099	0.52	[{'connected_gene': 'GC11M069240', 'score': 0.44}, {'connected_gene': 'MYEOV', 'score': 0.39}]
chr11	GH11I069274	69273064	69273431	0.52	[{'connected_gene': 'GC11M069240', 'score': 0.77}, {'connected_gene': 'MYEOV', 'score': 0.34}]
chr11	GH11I069368	69368189	69368402	0.61	[{'connected_gene': 'GC11P069370', 'score': 550.77}, {'connected_gene': 'ORAOV1', 'score': 11.4}, {'connected_gene': 'MYEOV', 'score': 7.86}, {'connected_gene': 'CCND1', 'score': 3.6}, {'connected_gene': 'IFITM9P', 'score': 0.21}, {'connected_gene': 'LOC105369370', 'score': 0.2}]