Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000377175 [[29011989, 29013017]] [[29011989, 29012952]]
NM_030903 [[29011989, 29012952]] [[29011989, 29012952]]
NM_030903 [[315431, 316394]] [[315431, 316394]]
NM_030903 [[530806, 531769]] [[530806, 531769]]
NM_030903 [[315400, 316363]] [[315400, 316363]]
NM_030903 [[315539, 316502]] [[315539, 316502]]
NM_030903 [[315386, 316349]] [[315386, 316349]]
NM_030903 [[315390, 316353]] [[315390, 316353]]
NM_030903 [[352867, 353830]] [[352867, 353830]]
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr6 GH06I028814 28814319 28814436 0.88 [{'connected_gene': 'ZNF311', 'score': 20.6}, {'connected_gene': 'ZKSCAN3', 'score': 11.19}, {'connected_gene': 'ZFP57', 'score': 10.43}, {'connected_gene': 'ZBED9', 'score': 5.1}, {'connected_gene': 'ZNF602P', 'score': 4.97}, {'connected_gene': 'OR14J1', 'score': 4.66}, {'connected_gene': 'GPX6', 'score': 4.57}, {'connected_gene': 'OR2W1', 'score': 4.23}, {'connected_gene': 'OR2J3', 'score': 2.91}, {'connected_gene': 'OR2B3', 'score': 2.11}, {'connected_gene': 'ZSCAN12', 'score': 2.04}, {'connected_gene': 'TRIM27', 'score': 1.29}, {'connected_gene': 'TRA-AGC6-1', 'score': 0.77}, {'connected_gene': 'GC06M028923', 'score': 0.77}, {'connected_gene': 'GC06M028850', 'score': 0.77}, {'connected_gene': 'GC06P028492', 'score': 0.05}]
chr6 GH06I029467 29467546 29467852 0.22 [{'connected_gene': 'GC06M029436', 'score': 550.77}, {'connected_gene': 'OR10C1', 'score': 19.37}, {'connected_gene': 'ZFP57', 'score': 14.06}, {'connected_gene': 'MAS1L', 'score': 12.07}, {'connected_gene': 'OR11A1', 'score': 11.58}, {'connected_gene': 'OR14J1', 'score': 11.16}, {'connected_gene': 'OR2W1', 'score': 7.4}, {'connected_gene': 'OR2J3', 'score': 6.42}, {'connected_gene': 'OR2B3', 'score': 4.27}, {'connected_gene': 'OR12D2', 'score': 2.45}, {'connected_gene': 'OR5V1', 'score': 2.29}, {'connected_gene': 'OR2H1', 'score': 1.91}, {'connected_gene': 'HLA-G', 'score': 1.87}, {'connected_gene': 'UBDP1', 'score': 0.77}]

© 2018 bmi.sjtu.edu.cn. All rights reserved.
浙ICP备18030141号.