PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000371253	[[46965439, 46968032], [46969237, 46969304], [46973553, 46973613], [46974989, 46975031], [46976680, 46978054], [46979742, 46979931], [46982416, 46982580], [46984352, 46984504], [46988466, 46988525], [46989693, 46989794], [46991779, 46991953], [46993589, 46993739], [46995439, 46995497], [46996728, 46996840], [47009926, 47010099]]	[[46967958, 46968032], [46969237, 46969304], [46973553, 46973613], [46974989, 46975031], [46976680, 46978054], [46979742, 46979931], [46982416, 46982580], [46984352, 46984504], [46988466, 46988525], [46989693, 46989794], [46991779, 46991953], [46993589, 46993739], [46995439, 46995497], [46996728, 46996797]]
ENST00000477858	[[46967769, 46968032], [46969237, 46969709]]	None
ENST00000419892	[[46967827, 46968032], [46969237, 46969304], [46973553, 46973613], [46974989, 46975031], [46976680, 46978054], [46979742, 46982580], [46984352, 46988233], [46988466, 46988525], [46989693, 46989794], [46991779, 46991953], [46993589, 46993739], [46996728, 46996840], [47009926, 47009993]]	None
ENST00000449332	[[46967847, 46968032], [46969237, 46969304], [46973553, 46973613], [46974989, 46975031], [46976680, 46978054], [46979742, 46979931], [46982416, 46982580], [46984352, 46984504], [46988466, 46988525], [46989693, 46989794], [46991779, 46991953], [46993589, 46993739], [46996728, 46996826]]	None
ENST00000283297	[[46967958, 46968032], [46969237, 46969304], [46973553, 46973613], [46974989, 46975031], [46976680, 46978054], [46979742, 46979931], [46982416, 46982580], [46984352, 46984504], [46986215, 46986235]]	[[46967958, 46968032], [46969237, 46969304], [46973553, 46973613], [46974989, 46975031], [46976680, 46978054], [46979742, 46979931], [46982416, 46982580], [46984352, 46984504], [46986215, 46986235]]
ENST00000475745	[[46979846, 46979931], [46982416, 46982580], [46988466, 46988525], [46989693, 46989794], [46991779, 46991953], [46993589, 46993728]]	[[46982570, 46982580], [46988466, 46988525], [46989693, 46989794], [46991779, 46991953], [46993589, 46993728]]
ENST00000471487	[[46980522, 46982580], [46984352, 46984504], [46988466, 46988525], [46989693, 46989794], [46991779, 46991953], [46993589, 46993739], [47009926, 47010086]]	None
ENST00000493249	[[46984352, 46984504], [46988466, 46988525], [46989693, 46989794], [46991779, 46992034]]	None
ENST00000487323	[[46984427, 46984504], [46986215, 46986318], [46988466, 46988525], [46989693, 46989794], [46991779, 46991953], [46993589, 46993636]]	[[46986287, 46986318], [46988466, 46988525], [46989693, 46989794], [46991779, 46991953], [46993589, 46993636]]
ENST00000371243	[[46987621, 46988233], [46988466, 46988525], [46989693, 46989794], [46991779, 46991953], [46993589, 46993739], [46995439, 46995497], [46996728, 46996840], [47009926, 47010030]]	[[46988187, 46988233], [46988466, 46988525], [46989693, 46989794], [46991779, 46991953], [46993589, 46993739], [46995439, 46995497], [46996728, 46996797]]
ENST00000491283	[[46987788, 46988525], [46989693, 46989794], [46991779, 46991953], [46993589, 46993739], [47009926, 47010006]]	None
ENST00000477771	[[46987789, 46988233], [46988466, 46988525], [46989693, 46989794], [46991779, 46991953], [46993589, 46993739], [46996728, 46996840], [47009926, 47010006]]	None
ENST00000474800	[[46988515, 46988525], [46989693, 46989794], [46991779, 46991953], [46993589, 46993739], [46995439, 46995497], [47009926, 47010020]]	None
NM_153840	[[46965439, 46968032], [46969237, 46969304], [46973553, 46973613], [46974989, 46975031], [46976680, 46978054], [46979742, 46979931], [46982416, 46982580], [46984352, 46984504], [46988466, 46988525], [46989693, 46989794], [46991779, 46991953], [46993589, 46993739], [46995439, 46995497], [46996728, 46996840], [47009926, 47010099]]	[[46967958, 46968032], [46969237, 46969304], [46973553, 46973613], [46974989, 46975031], [46976680, 46978054], [46979742, 46979931], [46982416, 46982580], [46984352, 46984504], [46988466, 46988525], [46989693, 46989794], [46991779, 46991953], [46993589, 46993739], [46995439, 46995497], [46996728, 46996797]]
NM_025048	[[46987621, 46988233], [46988466, 46988525], [46989693, 46989794], [46991779, 46991953], [46993589, 46993739], [46995439, 46995497], [46996728, 46996840], [47009926, 47010099]]	[[46988187, 46988233], [46988466, 46988525], [46989693, 46989794], [46991779, 46991953], [46993589, 46993739], [46995439, 46995497], [46996728, 46996797]]

Promoter

Chrom	Start	End	Description
chr6	46996835	46996871	CAGE_peak_6_at_GPR110_5end
chr6	47009992	47009993	CAGE_peak_4_at_GPR110_5end
chr6	47009996	47010035	CAGE_peak_2_at_GPR110_5end
chr6	47010042	47010053	CAGE_peak_3_at_GPR110_5end
chr6	47010061	47010104	CAGE_peak_1_at_GPR110_5end
chr6	47010258	47010273	CAGE_peak_5_at_GPR110_5end
chr6	47010286	47010292	CAGE_peak_11_at_GPR110_5end
chr6	47010305	47010311	CAGE_peak_8_at_GPR110_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I046982	46982678	46984508	0.94	[{'connected_gene': 'SLC25A27', 'score': 12.02}, {'connected_gene': 'TDRD6', 'score': 11.54}, {'connected_gene': 'ADGRF5', 'score': 11.45}, {'connected_gene': 'PLA2G7', 'score': 10.74}, {'connected_gene': 'ADGRF1', 'score': 0.22}]
chr6	GH06I047125	47125749	47128051	1.01	[{'connected_gene': 'SLC25A27', 'score': 11.24}, {'connected_gene': 'LOC105375081', 'score': 0.39}, {'connected_gene': 'ADGRF1', 'score': 0.18}]
chr6	GH06I047034	47034370	47035961	1.3	[{'connected_gene': 'PLA2G7', 'score': 9.55}, {'connected_gene': 'ADGRF1', 'score': 5.11}, {'connected_gene': 'ADGRF5', 'score': 0.18}]
chr6	GH06I047036	47036728	47037327	0.2	[{'connected_gene': 'PLA2G7', 'score': 9.99}, {'connected_gene': 'ADGRF1', 'score': 0.44}, {'connected_gene': 'ADGRF5', 'score': 0.18}]
chr6	GH06I047132	47132285	47138619	1.75	[{'connected_gene': 'PLA2G7', 'score': 1.84}, {'connected_gene': 'LOC105375081', 'score': 0.77}, {'connected_gene': 'ADGRF1', 'score': 0.16}]
chr6	GH06I047083	47083145	47084805	0.89	[{'connected_gene': 'TNFRSF21', 'score': 11.64}, {'connected_gene': 'PLA2G7', 'score': 9.45}, {'connected_gene': 'ADGRF1', 'score': 4.63}, {'connected_gene': 'LOC105375081', 'score': 0.23}]
chr6	GH06I047074	47074871	47078364	1.18	[{'connected_gene': 'TNFRSF21', 'score': 10.59}, {'connected_gene': 'PLA2G7', 'score': 10.0}, {'connected_gene': 'ADGRF5', 'score': 9.3}, {'connected_gene': 'ADGRF1', 'score': 0.29}, {'connected_gene': 'LOC105375081', 'score': 0.21}]
chr6	GH06I047061	47061342	47062468	1.17	[{'connected_gene': 'TNFRSF21', 'score': 10.86}, {'connected_gene': 'ADGRF1', 'score': 0.37}, {'connected_gene': 'LOC105375081', 'score': 0.18}]
chr6	GH06I047046	47046816	47048398	1.39	[{'connected_gene': 'TNFRSF21', 'score': 10.76}, {'connected_gene': 'ADGRF5', 'score': 10.54}, {'connected_gene': 'PLA2G7', 'score': 9.57}, {'connected_gene': 'ADGRF1', 'score': 0.44}, {'connected_gene': 'LOC105375081', 'score': 0.16}]
chr6	GH06I047057	47057619	47060414	0.63	[{'connected_gene': 'TNFRSF21', 'score': 11.49}, {'connected_gene': 'ADGRF5', 'score': 11.13}, {'connected_gene': 'PLA2G7', 'score': 9.84}, {'connected_gene': 'ADGRF1', 'score': 0.37}, {'connected_gene': 'LOC105375081', 'score': 0.18}]
chr6	GH06I047105	47105337	47108645	0.95	[{'connected_gene': 'TNFRSF21', 'score': 11.3}, {'connected_gene': 'LOC105375081', 'score': 0.29}, {'connected_gene': 'ADGRF1', 'score': 0.21}]
chr6	GH06I047111	47111511	47112079	0.76	[{'connected_gene': 'TNFRSF21', 'score': 11.26}, {'connected_gene': 'LOC105375081', 'score': 0.31}, {'connected_gene': 'ADGRF1', 'score': 0.2}]
chr6	GH06I047116	47116209	47118017	0.71	[{'connected_gene': 'TNFRSF21', 'score': 11.23}, {'connected_gene': 'LOC105375081', 'score': 0.34}, {'connected_gene': 'ADGRF1', 'score': 0.19}]
chr6	GH06I047096	47096125	47099636	1.1	[{'connected_gene': 'TNFRSF21', 'score': 11.66}, {'connected_gene': 'LOC105375081', 'score': 0.26}, {'connected_gene': 'ADGRF1', 'score': 0.22}]
chr6	GH06I047073	47073502	47073516	0.91	[{'connected_gene': 'ADGRF1', 'score': 0.29}, {'connected_gene': 'LOC105375081', 'score': 0.2}]
chr6	GH06I047041	47041309	47045908	1.59	[{'connected_gene': 'ADGRF1', 'score': 555.73}, {'connected_gene': 'LOC105375081', 'score': 0.15}]
chr6	GH06I047092	47092035	47095298	1.11	[{'connected_gene': 'ADGRF1', 'score': 4.57}, {'connected_gene': 'LOC105375081', 'score': 0.26}]
chr6	GH06I046995	46995691	46998415	0.54	[{'connected_gene': 'ADGRF5', 'score': 11.29}, {'connected_gene': 'PLA2G7', 'score': 10.7}, {'connected_gene': 'TNFRSF21', 'score': 9.75}, {'connected_gene': 'TDRD6', 'score': 9.71}, {'connected_gene': 'ADGRF1', 'score': 0.25}]
chr6	GH06I046990	46989882	46991227	0.89	[{'connected_gene': 'ADGRF5', 'score': 11.3}, {'connected_gene': 'PLA2G7', 'score': 10.71}, {'connected_gene': 'ADGRF1', 'score': 0.23}]
chr6	GH06I046993	46993404	46994801	0.46	[{'connected_gene': 'ADGRF5', 'score': 11.3}, {'connected_gene': 'PLA2G7', 'score': 10.71}, {'connected_gene': 'ADGRF1', 'score': 0.25}]
chr6	GH06I046954	46954926	46954985	0.88	[{'connected_gene': 'ADGRF5', 'score': 550.77}, {'connected_gene': 'ADGRF1', 'score': 0.17}]
chr6	GH06I046963	46963851	46965513	0.63	[{'connected_gene': 'LOC101926962', 'score': 9.83}, {'connected_gene': 'PLA2G7', 'score': 9.66}, {'connected_gene': 'ADGRF5', 'score': 0.44}, {'connected_gene': 'ADGRF1', 'score': 0.18}]
chr6	GH06I046989	46989604	46989773	0.49	[{'connected_gene': 'LOC101926962', 'score': 10.85}, {'connected_gene': 'ADGRF5', 'score': 0.29}, {'connected_gene': 'ADGRF1', 'score': 0.23}]