PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000396057	[[60296420, 60296842], [60297105, 60298355]]	[[60297162, 60298140]]
ENST00000560857	[[60296432, 60296842], [60317954, 60318108], [60328308, 60328428], [60353846, 60353929]]	None
ENST00000558693	[[60328328, 60328441], [60333810, 60334098]]	None
NM_012182	[[60296420, 60296842], [60297105, 60298142]]	[[60297162, 60298140]]

Promoter

Chrom	Start	End	Description
chr15	60296442	60296464	CAGE_peak_1_at_FOXB1_5end
chr15	60296481	60296492	CAGE_peak_7_at_FOXB1_5end
chr15	60296504	60296518	CAGE_peak_3_at_FOXB1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr15	GH15I059996	59996634	59997773	1.02	[{'connected_gene': 'ICE2', 'score': 12.69}, {'connected_gene': 'RPS3AP6', 'score': 11.33}, {'connected_gene': 'FOXB1', 'score': 0.44}, {'connected_gene': 'NMNAT1P5', 'score': 0.29}, {'connected_gene': 'GC15M059893', 'score': 0.23}]
chr15	GH15I060020	60020842	60020971	0.38	[{'connected_gene': 'ICE2', 'score': 20.22}, {'connected_gene': 'RPS3AP6', 'score': 13.28}, {'connected_gene': 'LOC105370838', 'score': 0.44}, {'connected_gene': 'FOXB1', 'score': 0.37}, {'connected_gene': 'GC15M059893', 'score': 0.31}]
chr15	GH15I059887	59886730	59886751	0.31	[{'connected_gene': 'FOXB1', 'score': 10.3}, {'connected_gene': 'DDX18P2', 'score': 0.39}, {'connected_gene': 'GC15P059937', 'score': 0.23}]
chr15	GH15I059886	59886022	59886171	0.85	[{'connected_gene': 'FOXB1', 'score': 10.3}, {'connected_gene': 'DDX18P2', 'score': 0.39}, {'connected_gene': 'GC15P059937', 'score': 0.23}]
chr15	GH15I059917	59917622	59917811	0.71	[{'connected_gene': 'FOXB1', 'score': 12.19}, {'connected_gene': 'GC15P059937', 'score': 0.37}, {'connected_gene': 'DDX18P2', 'score': 0.26}, {'connected_gene': 'GC15M059893', 'score': 0.12}]
chr15	GH15I059918	59918962	59920437	0.74	[{'connected_gene': 'FOXB1', 'score': 12.2}, {'connected_gene': 'GC15P059937', 'score': 0.37}, {'connected_gene': 'DDX18P2', 'score': 0.25}, {'connected_gene': 'GC15M059893', 'score': 0.13}]
chr15	GH15I060007	60005282	60005411	0.52	[{'connected_gene': 'FOXB1', 'score': 550.77}, {'connected_gene': 'LOC105370838', 'score': 0.34}, {'connected_gene': 'GC15M059893', 'score': 0.26}]
chr15	GH15I060026	60026642	60026791	0.43	[{'connected_gene': 'FOXB1', 'score': 11.81}, {'connected_gene': 'LOC105370838', 'score': 0.77}, {'connected_gene': 'GC15M059893', 'score': 0.34}]
chr15	GH15I060003	60003762	60004731	1.31	[{'connected_gene': 'FOXB1', 'score': 550.77}, {'connected_gene': 'LOC105370838', 'score': 0.31}, {'connected_gene': 'GC15M059893', 'score': 0.26}]
chr15	GH15I060010	60010122	60011330	0.46	[{'connected_gene': 'FOXB1', 'score': 0.44}, {'connected_gene': 'LOC105370838', 'score': 0.37}, {'connected_gene': 'GC15M059893', 'score': 0.28}]
chr15	GH15I060006	60005759	60005851	0.62	[{'connected_gene': 'FOXB1', 'score': 550.77}, {'connected_gene': 'LOC105370838', 'score': 0.34}, {'connected_gene': 'GC15M059893', 'score': 0.26}]
chr15	GH15I060004	60004982	60005151	0.49	[{'connected_gene': 'FOXB1', 'score': 550.77}, {'connected_gene': 'LOC105370838', 'score': 0.34}, {'connected_gene': 'GC15M059893', 'score': 0.26}]
chr15	GH15I060005	60005942	60006889	1.37	[{'connected_gene': 'FOXB1', 'score': 0.77}, {'connected_gene': 'LOC105370838', 'score': 0.34}, {'connected_gene': 'GC15M059893', 'score': 0.26}]
chr15	GH15I060009	60009782	60009931	0.38	[{'connected_gene': 'FOXB1', 'score': 0.44}, {'connected_gene': 'LOC105370838', 'score': 0.37}, {'connected_gene': 'GC15M059893', 'score': 0.28}]
chr15	GH15I059997	59996183	59996251	0.46	[{'connected_gene': 'FOXB1', 'score': 0.44}, {'connected_gene': 'NMNAT1P5', 'score': 0.29}, {'connected_gene': 'GC15M059893', 'score': 0.23}]
chr15	GH15I059995	59994967	59995658	0.46	[{'connected_gene': 'FOXB1', 'score': 0.44}, {'connected_gene': 'NMNAT1P5', 'score': 0.29}, {'connected_gene': 'GC15M059893', 'score': 0.23}]
chr15	GH15I059976	59976390	59976978	0.69	[{'connected_gene': 'FOXB1', 'score': 12.24}, {'connected_gene': 'NMNAT1P5', 'score': 0.39}, {'connected_gene': 'GC15M059893', 'score': 0.19}]
chr15	GH15I059993	59993982	59994131	0.46	[{'connected_gene': 'FOXB1', 'score': 0.39}, {'connected_gene': 'NMNAT1P5', 'score': 0.31}, {'connected_gene': 'GC15M059893', 'score': 0.23}]
chr15	GH15I060001	60001562	60001611	0.43	[{'connected_gene': 'FOXB1', 'score': 0.77}, {'connected_gene': 'NMNAT1P5', 'score': 0.28}, {'connected_gene': 'GC15M059893', 'score': 0.25}]
chr15	GH15I059999	59999662	59999811	0.31	[{'connected_gene': 'FOXB1', 'score': 0.77}, {'connected_gene': 'NMNAT1P5', 'score': 0.29}, {'connected_gene': 'GC15M059893', 'score': 0.25}]
chr15	GH15I059998	59998180	59999631	0.96	[{'connected_gene': 'FOXB1', 'score': 0.44}, {'connected_gene': 'NMNAT1P5', 'score': 0.29}, {'connected_gene': 'GC15M059893', 'score': 0.23}]
chr15	GH15I060002	60001662	60001711	0.43	[{'connected_gene': 'FOXB1', 'score': 0.77}, {'connected_gene': 'NMNAT1P5', 'score': 0.28}, {'connected_gene': 'GC15M059893', 'score': 0.25}]
chr15	GH15I059994	59994262	59994391	0.38	[{'connected_gene': 'FOXB1', 'score': 0.44}, {'connected_gene': 'NMNAT1P5', 'score': 0.31}, {'connected_gene': 'GC15M059893', 'score': 0.23}]
chr15	GH15I060000	59999981	60001348	0.92	[{'connected_gene': 'FOXB1', 'score': 0.77}, {'connected_gene': 'NMNAT1P5', 'score': 0.28}, {'connected_gene': 'GC15M059893', 'score': 0.25}]
chr15	GH15I060025	60025517	60025724	0.66	[{'connected_gene': 'LOC105370838', 'score': 0.77}, {'connected_gene': 'GC15M059893', 'score': 0.34}, {'connected_gene': 'FOXB1', 'score': 0.34}]
chr15	GH15I060045	60045066	60045166	0.51	[{'connected_gene': 'GC15M059893', 'score': 0.77}, {'connected_gene': 'LOC105370838', 'score': 0.37}, {'connected_gene': 'FOXB1', 'score': 0.26}]