PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000491415	[[210001351, 210001515], [210003452, 210003492], [210004147, 210004388], [210006529, 210006703], [210008419, 210008508], [210010145, 210010556], [210012253, 210012473], [210014197, 210014400], [210015609, 210015792], [210015927, 210016040], [210016795, 210017041], [210024548, 210030910]]	[[210001408, 210001515], [210003452, 210003492], [210004147, 210004388], [210006529, 210006703], [210008419, 210008508], [210010145, 210010556], [210012253, 210012473], [210014197, 210014400], [210015609, 210015792], [210015927, 210016040], [210016795, 210017041], [210024548, 210024792]]
ENST00000457820	[[210012149, 210012473], [210014197, 210014400], [210015609, 210017977]]	[[210012149, 210012473], [210014197, 210014400], [210015609, 210015828]]
NM_014388	[[210001311, 210001515], [210003452, 210003492], [210004147, 210004388], [210006529, 210006703], [210008419, 210008508], [210010145, 210010556], [210012253, 210012473], [210014197, 210014400], [210015609, 210015792], [210015927, 210016040], [210016795, 210017041], [210024548, 210030910]]	[[210001408, 210001515], [210003452, 210003492], [210004147, 210004388], [210006529, 210006703], [210008419, 210008508], [210010145, 210010556], [210012253, 210012473], [210014197, 210014400], [210015609, 210015792], [210015927, 210016040], [210016795, 210017041], [210024548, 210024792]]

Promoter

Chrom	Start	End	Description
chr1	210001309	210001411	CAGE_peak_1_at_DIEXF_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I209765	209765142	209772000	2.06	[{'connected_gene': 'TRAF3IP3', 'score': 567.63}, {'connected_gene': 'G0S2', 'score': 30.7}, {'connected_gene': 'DIEXF', 'score': 11.19}, {'connected_gene': 'ENSG00000224260', 'score': 9.46}, {'connected_gene': 'LAMB3', 'score': 8.64}, {'connected_gene': 'IRF6', 'score': 8.11}, {'connected_gene': 'C1orf74', 'score': 1.74}, {'connected_gene': 'LOC101930114', 'score': 0.39}]
chr1	GH01I210236	210236263	210238442	1.12	[{'connected_gene': 'HHAT', 'score': 11.18}, {'connected_gene': 'DIEXF', 'score': 10.74}, {'connected_gene': 'SERTAD4-AS1', 'score': 0.77}, {'connected_gene': 'SERTAD4', 'score': 0.77}, {'connected_gene': 'GC01P210243', 'score': 0.44}]
chr1	GH01I209672	209672349	209676552	2.25	[{'connected_gene': 'G0S2', 'score': 559.81}, {'connected_gene': 'GC01P209677', 'score': 550.77}, {'connected_gene': 'GC01P209676', 'score': 550.77}, {'connected_gene': 'DIEXF', 'score': 14.81}, {'connected_gene': 'LOC101930114', 'score': 6.32}, {'connected_gene': 'LAMB3', 'score': 0.34}]
chr1	GH01I209800	209800845	209810995	2.63	[{'connected_gene': 'IRF6', 'score': 578.59}, {'connected_gene': 'TRAF3IP3', 'score': 14.53}, {'connected_gene': 'DIEXF', 'score': 10.67}, {'connected_gene': 'SYT14', 'score': 7.44}, {'connected_gene': 'LAMB3', 'score': 1.81}, {'connected_gene': 'C1orf74', 'score': 0.34}]
chr1	GH01I209789	209789432	209793310	0.79	[{'connected_gene': 'IRF6', 'score': 24.32}, {'connected_gene': 'TRAF3IP3', 'score': 13.42}, {'connected_gene': 'DIEXF', 'score': 9.99}, {'connected_gene': 'SYT14', 'score': 6.04}, {'connected_gene': 'C1orf74', 'score': 0.44}]
chr1	GH01I209795	209795340	209798626	0.82	[{'connected_gene': 'IRF6', 'score': 25.19}, {'connected_gene': 'DIEXF', 'score': 11.02}, {'connected_gene': 'TRAF3IP3', 'score': 10.1}, {'connected_gene': 'SYT14', 'score': 6.03}, {'connected_gene': 'C1orf74', 'score': 0.39}]
chr1	GH01I209779	209779438	209781126	0.66	[{'connected_gene': 'IRF6', 'score': 19.16}, {'connected_gene': 'DIEXF', 'score': 10.33}, {'connected_gene': 'HSD11B1', 'score': 9.23}, {'connected_gene': 'C1orf74', 'score': 0.77}, {'connected_gene': 'LOC101930114', 'score': 0.34}, {'connected_gene': 'TRAF3IP3', 'score': 0.34}]
chr1	GH01I209829	209829059	209832767	0.49	[{'connected_gene': 'IRF6', 'score': 21.3}, {'connected_gene': 'DIEXF', 'score': 14.59}, {'connected_gene': 'SYT14', 'score': 11.2}, {'connected_gene': 'C1orf74', 'score': 10.75}, {'connected_gene': 'TRAF3IP3', 'score': 9.7}, {'connected_gene': 'GC01M209934', 'score': 0.14}]
chr1	GH01I209834	209834901	209837225	0.52	[{'connected_gene': 'IRF6', 'score': 21.25}, {'connected_gene': 'DIEXF', 'score': 14.04}, {'connected_gene': 'SYT14', 'score': 11.0}, {'connected_gene': 'GC01M209934', 'score': 0.15}]
chr1	GH01I209820	209820202	209821658	0.2	[{'connected_gene': 'IRF6', 'score': 21.12}, {'connected_gene': 'DIEXF', 'score': 14.66}, {'connected_gene': 'C1orf74', 'score': 11.46}, {'connected_gene': 'LOC101930114', 'score': 10.4}]
chr1	GH01I209903	209903638	209904950	0.2	[{'connected_gene': 'IRF6', 'score': 6.95}, {'connected_gene': 'GC01M209934', 'score': 0.29}, {'connected_gene': 'DIEXF', 'score': 0.18}]
chr1	GH01I209844	209844680	209847089	0.52	[{'connected_gene': 'IRF6', 'score': 20.8}, {'connected_gene': 'SYT14', 'score': 11.52}, {'connected_gene': 'TRAF3IP3', 'score': 8.39}, {'connected_gene': 'DIEXF', 'score': 0.37}, {'connected_gene': 'GC01M209934', 'score': 0.16}]
chr1	GH01I209838	209838094	209842183	1.16	[{'connected_gene': 'IRF6', 'score': 20.64}, {'connected_gene': 'SYT14', 'score': 14.59}, {'connected_gene': 'TRAF3IP3', 'score': 8.32}, {'connected_gene': 'DIEXF', 'score': 0.39}, {'connected_gene': 'GC01M209934', 'score': 0.15}]
chr1	GH01I209853	209853219	209857384	0.43	[{'connected_gene': 'IRF6', 'score': 20.35}, {'connected_gene': 'SYT14', 'score': 16.97}, {'connected_gene': 'TRAF3IP3', 'score': 11.7}, {'connected_gene': 'DIEXF', 'score': 11.22}, {'connected_gene': 'GC01M209934', 'score': 0.18}]
chr1	GH01I209811	209811438	209812971	0.31	[{'connected_gene': 'IRF6', 'score': 14.08}, {'connected_gene': 'C1orf74', 'score': 11.38}, {'connected_gene': 'TRAF3IP3', 'score': 10.79}, {'connected_gene': 'DIEXF', 'score': 0.37}]
chr1	GH01I209814	209814153	209818041	1.48	[{'connected_gene': 'IRF6', 'score': 17.61}, {'connected_gene': 'C1orf74', 'score': 11.48}, {'connected_gene': 'LOC101930114', 'score': 10.41}, {'connected_gene': 'SYT14', 'score': 7.54}, {'connected_gene': 'LAMB3', 'score': 2.92}, {'connected_gene': 'DIEXF', 'score': 0.39}]
chr1	GH01I209861	209860416	209860585	0.64	[{'connected_gene': 'DIEXF', 'score': 11.07}, {'connected_gene': 'TRAF3IP3', 'score': 10.46}, {'connected_gene': 'GC01M209934', 'score': 0.18}]
chr1	GH01I209822	209822523	209829001	2.48	[{'connected_gene': 'DIEXF', 'score': 566.01}, {'connected_gene': 'IRF6', 'score': 21.07}, {'connected_gene': 'SYT14', 'score': 14.57}, {'connected_gene': 'C1orf74', 'score': 11.45}, {'connected_gene': 'LOC101930114', 'score': 10.39}, {'connected_gene': 'TRAF3IP3', 'score': 10.25}]
chr1	GH01I209798	209798996	209799105	0.2	[{'connected_gene': 'DIEXF', 'score': 10.86}, {'connected_gene': 'IRF6', 'score': 0.44}, {'connected_gene': 'C1orf74', 'score': 0.39}]
chr1	GH01I209777	209777264	209778973	0.31	[{'connected_gene': 'DIEXF', 'score': 16.55}, {'connected_gene': 'LOC101930114', 'score': 10.72}, {'connected_gene': 'TRAF3IP3', 'score': 10.08}, {'connected_gene': 'HSD11B1', 'score': 9.73}, {'connected_gene': 'IRF6', 'score': 6.19}, {'connected_gene': 'C1orf74', 'score': 0.44}]
chr1	GH01I209862	209862696	209862885	0.4	[{'connected_gene': 'DIEXF', 'score': 11.07}, {'connected_gene': 'GC01M209934', 'score': 0.18}]
chr1	GH01I209850	209850516	209850665	0.97	[{'connected_gene': 'DIEXF', 'score': 11.25}, {'connected_gene': 'GC01M209934', 'score': 0.17}]
chr1	GH01I209860	209860697	209862048	0.56	[{'connected_gene': 'DIEXF', 'score': 11.07}, {'connected_gene': 'GC01M209934', 'score': 0.18}]
chr1	GH01I209869	209869371	209876305	1.1	[{'connected_gene': 'SYT14', 'score': 35.08}, {'connected_gene': 'TRAF3IP3', 'score': 12.85}, {'connected_gene': 'IRF6', 'score': 9.49}, {'connected_gene': 'DIEXF', 'score': 0.26}, {'connected_gene': 'GC01M209934', 'score': 0.2}]
chr1	GH01I209879	209879331	209880554	0.84	[{'connected_gene': 'SYT14', 'score': 34.33}, {'connected_gene': 'TRAF3IP3', 'score': 10.0}, {'connected_gene': 'DIEXF', 'score': 0.23}, {'connected_gene': 'GC01M209934', 'score': 0.22}]
chr1	GH01I209876	209876597	209877921	0.57	[{'connected_gene': 'SYT14', 'score': 32.8}, {'connected_gene': 'TRAF3IP3', 'score': 9.37}, {'connected_gene': 'DIEXF', 'score': 0.25}, {'connected_gene': 'GC01M209934', 'score': 0.21}]
chr1	GH01I209863	209863203	209865056	0.54	[{'connected_gene': 'SYT14', 'score': 15.76}, {'connected_gene': 'IRF6', 'score': 11.27}, {'connected_gene': 'DIEXF', 'score': 11.05}, {'connected_gene': 'GC01M209934', 'score': 0.19}]
chr1	GH01I209899	209899657	209902636	0.74	[{'connected_gene': 'SYT14', 'score': 11.3}, {'connected_gene': 'IRF6', 'score': 7.18}, {'connected_gene': 'GC01M209934', 'score': 0.28}, {'connected_gene': 'DIEXF', 'score': 0.19}]
chr1	GH01I209882	209882085	209886500	1.66	[{'connected_gene': 'SYT14', 'score': 34.45}, {'connected_gene': 'DIEXF', 'score': 12.26}, {'connected_gene': 'IRF6', 'score': 6.69}, {'connected_gene': 'TRAF3IP3', 'score': 4.47}, {'connected_gene': 'LAMB3', 'score': 2.3}, {'connected_gene': 'GC01M209934', 'score': 0.23}]
chr1	GH01I209889	209889987	209893008	0.66	[{'connected_gene': 'SYT14', 'score': 22.18}, {'connected_gene': 'GC01M209934', 'score': 0.25}, {'connected_gene': 'DIEXF', 'score': 0.21}]
chr1	GH01I209893	209893371	209897587	0.69	[{'connected_gene': 'SYT14', 'score': 22.35}, {'connected_gene': 'DIEXF', 'score': 5.95}, {'connected_gene': 'GC01M209934', 'score': 0.26}]
chr1	GH01I210371	210371982	210375342	1.28	[{'connected_gene': 'RNU5A-8P', 'score': 550.77}, {'connected_gene': 'GC01M210375', 'score': 550.77}, {'connected_gene': 'RCOR3', 'score': 39.77}, {'connected_gene': 'SERTAD4-AS1', 'score': 14.9}, {'connected_gene': 'SERTAD4', 'score': 13.77}, {'connected_gene': 'ST13P19', 'score': 11.49}, {'connected_gene': 'DIEXF', 'score': 11.07}, {'connected_gene': 'HHAT', 'score': 4.4}, {'connected_gene': 'PIR50724', 'score': 0.44}]
chr1	GH01I209688	209688276	209689820	0.94	[{'connected_gene': 'ENSG00000224260', 'score': 11.08}, {'connected_gene': 'LOC101930114', 'score': 10.7}, {'connected_gene': 'CAMK1G', 'score': 10.35}, {'connected_gene': 'DIEXF', 'score': 5.22}, {'connected_gene': 'HSD11B1', 'score': 0.77}, {'connected_gene': 'ADORA2BP1', 'score': 0.22}]