PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000494373	[[54014180, 54014509], [54015719, 54015842], [54021481, 54021514]]	None
ENST00000405123	[[54014216, 54014509], [54021481, 54021586], [54023069, 54023150], [54024651, 54024729], [54024868, 54024932], [54026183, 54026218], [54028533, 54028757], [54028849, 54028979], [54035435, 54035597], [54036350, 54036410], [54040085, 54040210], [54041996, 54042072], [54045034, 54045357]]	[[54014347, 54014509], [54021481, 54021586], [54023069, 54023150], [54024651, 54024729], [54024868, 54024932], [54026183, 54026218], [54028533, 54028757], [54028849, 54028979], [54035435, 54035597], [54036350, 54036410], [54040085, 54040210], [54041996, 54042072], [54045034, 54045106]]
ENST00000185150	[[54014216, 54014509], [54021481, 54021586], [54023069, 54023150], [54024651, 54024729], [54024868, 54024932], [54026183, 54026218], [54028533, 54028757], [54028849, 54028979], [54035435, 54035597], [54036350, 54036410], [54040085, 54040210], [54041679, 54041757], [54041996, 54042072], [54045034, 54045956]]	[[54014347, 54014509], [54021481, 54021586], [54023069, 54023150], [54024651, 54024729], [54024868, 54024932], [54026183, 54026218], [54028533, 54028757], [54028849, 54028979], [54035435, 54035597], [54036350, 54036410], [54040085, 54040210], [54041679, 54041757], [54041996, 54042072], [54045034, 54045106]]
ENST00000378239	[[54014216, 54014509], [54021481, 54021586], [54023069, 54023150], [54024651, 54024729], [54024868, 54024932], [54026183, 54026218], [54028533, 54028757], [54028849, 54028979], [54036350, 54036410], [54040085, 54040210], [54041679, 54041757], [54041996, 54042072], [54045034, 54045956]]	[[54014347, 54014509], [54021481, 54021586], [54023069, 54023150], [54024651, 54024729], [54024868, 54024932], [54026183, 54026218], [54028533, 54028757], [54028849, 54028979], [54036350, 54036410], [54040085, 54040210], [54041679, 54041757], [54041996, 54042072], [54045034, 54045106]]
NM_001127398	[[54014067, 54014509], [54021481, 54021586], [54023069, 54023150], [54024651, 54024729], [54024868, 54024932], [54026183, 54026218], [54028533, 54028757], [54028849, 54028979], [54036350, 54036410], [54040085, 54040210], [54041679, 54041757], [54041996, 54042072], [54045034, 54045956]]	[[54014347, 54014509], [54021481, 54021586], [54023069, 54023150], [54024651, 54024729], [54024868, 54024932], [54026183, 54026218], [54028533, 54028757], [54028849, 54028979], [54036350, 54036410], [54040085, 54040210], [54041679, 54041757], [54041996, 54042072], [54045034, 54045106]]
NM_001127397	[[54014067, 54014509], [54021481, 54021586], [54023069, 54023150], [54024651, 54024729], [54024868, 54024932], [54026183, 54026218], [54028533, 54028757], [54028849, 54028979], [54035435, 54035597], [54036350, 54036410], [54040085, 54040210], [54041996, 54042072], [54045034, 54045956]]	[[54014347, 54014509], [54021481, 54021586], [54023069, 54023150], [54024651, 54024729], [54024868, 54024932], [54026183, 54026218], [54028533, 54028757], [54028849, 54028979], [54035435, 54035597], [54036350, 54036410], [54040085, 54040210], [54041996, 54042072], [54045034, 54045106]]
NM_015701	[[54014067, 54014509], [54021481, 54021586], [54023069, 54023150], [54024651, 54024729], [54024868, 54024932], [54026183, 54026218], [54028533, 54028757], [54028849, 54028979], [54035435, 54035597], [54036350, 54036410], [54040085, 54040210], [54041679, 54041757], [54041996, 54042072], [54045034, 54045956]]	[[54014347, 54014509], [54021481, 54021586], [54023069, 54023150], [54024651, 54024729], [54024868, 54024932], [54026183, 54026218], [54028533, 54028757], [54028849, 54028979], [54035435, 54035597], [54036350, 54036410], [54040085, 54040210], [54041679, 54041757], [54041996, 54042072], [54045034, 54045106]]

Promoter

Chrom	Start	End	Description
chr2	54013633	54013650	CAGE_peak_6_at_ERLEC1_5end
chr2	54014146	54014159	CAGE_peak_3_at_ERLEC1_5end
chr2	54014168	54014220	CAGE_peak_1_at_ERLEC1_5end
chr2	54014270	54014287	CAGE_peak_2_at_ERLEC1_5end
chr2	54014300	54014311	CAGE_peak_4_at_ERLEC1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I053820	53820184	53820333	0.2	[{'connected_gene': 'ACYP2', 'score': 15.78}, {'connected_gene': 'PIR55664', 'score': 0.39}, {'connected_gene': 'ERLEC1', 'score': 0.29}, {'connected_gene': 'ASB3', 'score': 0.29}, {'connected_gene': 'GPR75-ASB3', 'score': 0.28}]
chr2	GH02I053826	53826226	53827418	1.59	[{'connected_gene': 'ACYP2', 'score': 16.46}, {'connected_gene': 'PIR55664', 'score': 0.77}, {'connected_gene': 'GPR75-ASB3', 'score': 0.29}, {'connected_gene': 'ERLEC1', 'score': 0.28}, {'connected_gene': 'ASB3', 'score': 0.28}]
chr2	GH02I053785	53785485	53788485	2.07	[{'connected_gene': 'ASB3', 'score': 554.8}, {'connected_gene': 'ERLEC1', 'score': 550.77}, {'connected_gene': 'ACYP2', 'score': 17.08}, {'connected_gene': 'GPR75', 'score': 4.45}, {'connected_gene': 'GPR75-ASB3', 'score': 0.19}]
chr2	GH02I053766	53766744	53769247	1.99	[{'connected_gene': 'CHAC2', 'score': 550.77}, {'connected_gene': 'ACYP2', 'score': 8.79}, {'connected_gene': 'ASB3', 'score': 4.31}, {'connected_gene': 'ERLEC1', 'score': 0.37}, {'connected_gene': 'GC02P053747', 'score': 0.34}, {'connected_gene': 'GPR75-ASB3', 'score': 0.16}]
chr2	GH02I053769	53769444	53769487	0.66	[{'connected_gene': 'CHAC2', 'score': 550.77}, {'connected_gene': 'ACYP2', 'score': 16.94}, {'connected_gene': 'ERLEC1', 'score': 0.37}, {'connected_gene': 'ASB3', 'score': 0.37}, {'connected_gene': 'GC02P053747', 'score': 0.34}, {'connected_gene': 'GPR75-ASB3', 'score': 0.16}]
chr2	GH02I053811	53811722	53814192	0.63	[{'connected_gene': 'ERLEC1', 'score': 11.87}, {'connected_gene': 'ASB3', 'score': 11.87}, {'connected_gene': 'ACYP2', 'score': 11.74}, {'connected_gene': 'PIR55664', 'score': 0.37}, {'connected_gene': 'GPR75-ASB3', 'score': 0.25}]
chr2	GH02I053791	53791902	53792237	0.31	[{'connected_gene': 'GPR75', 'score': 8.3}, {'connected_gene': 'ACYP2', 'score': 7.01}, {'connected_gene': 'ASB3', 'score': 3.06}, {'connected_gene': 'ERLEC1', 'score': 0.44}, {'connected_gene': 'PIR55664', 'score': 0.28}, {'connected_gene': 'GPR75-ASB3', 'score': 0.2}]