PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000484979	[[58205943, 58209245], [58240601, 58240660], [58240786, 58240967], [58298745, 58299695]]	[[58206680, 58209245], [58240601, 58240660], [58240786, 58240832]]
ENST00000377918	[[58206654, 58209245], [58240601, 58240660], [58240794, 58240967], [58298745, 58303445]]	[[58206680, 58209245], [58240601, 58240660], [58240794, 58240967], [58298745, 58299428]]
NM_001040429	[[58205788, 58209245], [58240601, 58240660], [58240794, 58240967], [58298745, 58303065]]	[[58206680, 58209245], [58240601, 58240660], [58240794, 58240967], [58298745, 58299428]]

Promoter

Chrom	Start	End	Description
chr13	58205562	58205573	CAGE_peak_6_at_PCDH17_5end
chr13	58205869	58205900	CAGE_peak_2_at_PCDH17_5end
chr13	58205930	58205965	CAGE_peak_1_at_PCDH17_5end
chr13	58206234	58206253	CAGE_peak_5_at_PCDH17_5end
chr13	58207801	58207824	CAGE_peak_4_at_PCDH17_5end
chr13	58207827	58207847	CAGE_peak_3_at_PCDH17_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I057582	57582087	57582236	0.31	[{'connected_gene': 'PCDH17', 'score': 0.25}, {'connected_gene': 'LOC105370217', 'score': 0.21}]
chr13	GH13I058050	58050736	58052328	0.2	[{'connected_gene': 'PCDH17', 'score': 13.81}, {'connected_gene': 'GC13P058012', 'score': 0.28}, {'connected_gene': 'LINC02338', 'score': 0.14}]
chr13	GH13I057865	57865211	57866259	0.52	[{'connected_gene': 'PCDH17', 'score': 6.38}, {'connected_gene': 'GC13P057869', 'score': 0.77}, {'connected_gene': 'GC13P057773', 'score': 0.16}]
chr13	GH13I057643	57643304	57645288	0.2	[{'connected_gene': 'PCDH17', 'score': 5.1}, {'connected_gene': 'ENSG00000278722', 'score': 0.39}, {'connected_gene': 'GC13M057672', 'score': 0.31}]
chr13	GH13I057662	57662550	57664469	0.2	[{'connected_gene': 'PCDH17', 'score': 4.89}, {'connected_gene': 'GC13M057672', 'score': 0.44}, {'connected_gene': 'ENSG00000278722', 'score': 0.31}]
chr13	GH13I057629	57629467	57633944	1.94	[{'connected_gene': 'PCDH17', 'score': 550.77}, {'connected_gene': 'ENSG00000278722', 'score': 550.77}]
chr13	GH13I057527	57527387	57527476	0.31	[{'connected_gene': 'LOC105370217', 'score': 0.44}, {'connected_gene': 'PCDH17', 'score': 0.15}]
chr13	GH13I057636	57636745	57638939	0.2	[{'connected_gene': 'ENSG00000278722', 'score': 0.77}, {'connected_gene': 'PCDH17', 'score': 0.44}, {'connected_gene': 'GC13M057672', 'score': 0.28}]
chr13	GH13I057666	57666245	57666589	0.78	[{'connected_gene': 'GC13M057672', 'score': 0.44}, {'connected_gene': 'ENSG00000278722', 'score': 0.29}, {'connected_gene': 'PCDH17', 'score': 0.28}]
chr13	GH13I057661	57661231	57662331	0.2	[{'connected_gene': 'GC13M057672', 'score': 0.39}, {'connected_gene': 'ENSG00000278722', 'score': 0.31}, {'connected_gene': 'PCDH17', 'score': 0.29}]
chr13	GH13I057726	57726180	57726379	0.51	[{'connected_gene': 'GC13P057739', 'score': 0.39}, {'connected_gene': 'GC13M057672', 'score': 0.23}, {'connected_gene': 'PCDH17', 'score': 0.15}]
chr13	GH13I057672	57672827	57673510	0.31	[{'connected_gene': 'GC13M057672', 'score': 550.77}, {'connected_gene': 'PCDH17', 'score': 4.96}, {'connected_gene': 'ENSG00000278722', 'score': 0.28}]
chr13	GH13I057655	57655439	57656848	0.2	[{'connected_gene': 'GC13M057672', 'score': 0.37}, {'connected_gene': 'ENSG00000278722', 'score': 0.34}, {'connected_gene': 'PCDH17', 'score': 0.31}]
chr13	GH13I057640	57640102	57641383	0.31	[{'connected_gene': 'ENSG00000278722', 'score': 0.44}, {'connected_gene': 'PCDH17', 'score': 0.39}, {'connected_gene': 'GC13M057672', 'score': 0.29}]