PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000538205	[[24241797, 24242105], [24247641, 24247731], [24249774, 24249893], [24250774, 24250851], [24251581, 24251660], [24253232, 24253309], [24254782, 24254969], [24255195, 24255258], [24255992, 24256064], [24256386, 24256553], [24256905, 24256987], [24257682, 24257813], [24259427, 24259605], [24261515, 24261601], [24262804, 24263526]]	[[24250804, 24250851], [24251581, 24251660], [24253232, 24253309], [24254782, 24254969], [24255195, 24255258], [24255992, 24256064], [24256386, 24256553], [24256905, 24256987], [24257682, 24257813], [24259427, 24259605], [24261515, 24261601], [24262804, 24262811]]
ENST00000256412	[[24241797, 24242105], [24249774, 24249893], [24250774, 24250851], [24251581, 24251660], [24253232, 24253309], [24254782, 24254969], [24255195, 24255258], [24255992, 24256064], [24256386, 24256553], [24256905, 24256987], [24257682, 24257813], [24259427, 24259605], [24261515, 24261601], [24262804, 24263526]]	[[24242017, 24242105], [24249774, 24249893], [24250774, 24250851], [24251581, 24251660], [24253232, 24253309], [24254782, 24254969], [24255195, 24255258], [24255992, 24256064], [24256386, 24256553], [24256905, 24256987], [24257682, 24257813], [24259427, 24259605], [24261515, 24261601], [24262804, 24262811]]
ENST00000522298	[[24241982, 24242105], [24250774, 24250851], [24251581, 24251660], [24253232, 24253309], [24254782, 24254969], [24255195, 24255258], [24255992, 24256064], [24256386, 24256553], [24256905, 24256987], [24257682, 24257813], [24259427, 24259605], [24261515, 24261601], [24262804, 24263526]]	[[24250804, 24250851], [24251581, 24251660], [24253232, 24253309], [24254782, 24254969], [24255195, 24255258], [24255992, 24256064], [24256386, 24256553], [24256905, 24256987], [24257682, 24257813], [24259427, 24259605], [24261515, 24261601], [24262804, 24262811]]
ENST00000520193	[[24242017, 24242105], [24247641, 24247731], [24249774, 24249893], [24250774, 24250851], [24251581, 24251660], [24253232, 24253309], [24254782, 24254969], [24255195, 24255258], [24255992, 24256064], [24256386, 24256553], [24256905, 24256987], [24257682, 24257813], [24259427, 24259605], [24261515, 24261601], [24262804, 24263230]]	[[24242017, 24242105], [24247641, 24247679]]
ENST00000519953	[[24262804, 24262957], [24263046, 24263525]]	None
NM_001145272	[[24241797, 24242105], [24250774, 24250851], [24251581, 24251660], [24253232, 24253309], [24254782, 24254969], [24255195, 24255258], [24255992, 24256064], [24256386, 24256553], [24256905, 24256987], [24257682, 24257813], [24259427, 24259605], [24261515, 24261601], [24262804, 24263526]]	[[24250804, 24250851], [24251581, 24251660], [24253232, 24253309], [24254782, 24254969], [24255195, 24255258], [24255992, 24256064], [24256386, 24256553], [24256905, 24256987], [24257682, 24257813], [24259427, 24259605], [24261515, 24261601], [24262804, 24262811]]
NM_014479	[[24241797, 24242105], [24249774, 24249893], [24250774, 24250851], [24251581, 24251660], [24253232, 24253309], [24254782, 24254969], [24255195, 24255258], [24255992, 24256064], [24256386, 24256553], [24256905, 24256987], [24257682, 24257813], [24259427, 24259605], [24261515, 24261601], [24262804, 24263526]]	[[24242017, 24242105], [24249774, 24249893], [24250774, 24250851], [24251581, 24251660], [24253232, 24253309], [24254782, 24254969], [24255195, 24255258], [24255992, 24256064], [24256386, 24256553], [24256905, 24256987], [24257682, 24257813], [24259427, 24259605], [24261515, 24261601], [24262804, 24262811]]
NM_001145271	[[24241797, 24242105], [24247641, 24247731], [24249774, 24249893], [24250774, 24250851], [24251581, 24251660], [24253232, 24253309], [24254782, 24254969], [24255195, 24255258], [24255992, 24256064], [24256386, 24256553], [24256905, 24256987], [24257682, 24257813], [24259427, 24259605], [24261515, 24261601], [24262804, 24263526]]	[[24250804, 24250851], [24251581, 24251660], [24253232, 24253309], [24254782, 24254969], [24255195, 24255258], [24255992, 24256064], [24256386, 24256553], [24256905, 24256987], [24257682, 24257813], [24259427, 24259605], [24261515, 24261601], [24262804, 24262811]]

Promoter

Chrom	Start	End	Description
chr8	24241789	24241802	CAGE_peak_4_at_ADAMDEC1_5end
chr8	24241955	24241966	CAGE_peak_3_at_ADAMDEC1_5end
chr8	24241969	24241999	CAGE_peak_2_at_ADAMDEC1_5end
chr8	24242010	24242026	CAGE_peak_1_at_ADAMDEC1_5end
chr8	24262894	24262908	CAGE_peak_6_at_ADAMDEC1_5end
chr8	24262931	24262946	CAGE_peak_5_at_ADAMDEC1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I024383	24383748	24389107	1.96	[{'connected_gene': 'ADAMDEC1', 'score': 560.53}, {'connected_gene': 'ADAM28', 'score': 10.29}, {'connected_gene': 'ADAM7', 'score': 5.6}, {'connected_gene': 'PIR51295', 'score': 0.44}, {'connected_gene': 'GC08P024271', 'score': 0.13}, {'connected_gene': 'LOC101929294', 'score': 0.1}, {'connected_gene': 'GC08P024089', 'score': 0.06}, {'connected_gene': 'ENSG00000253535', 'score': 0.03}]
chr8	GH08I024375	24375119	24377604	0.2	[{'connected_gene': 'ADAMDEC1', 'score': 0.44}, {'connected_gene': 'ADAM28', 'score': 0.18}, {'connected_gene': 'GC08P024271', 'score': 0.14}, {'connected_gene': 'LOC101929294', 'score': 0.09}, {'connected_gene': 'GC08P024089', 'score': 0.06}, {'connected_gene': 'ENSG00000253535', 'score': 0.03}]
chr8	GH08I024355	24355422	24356712	0.38	[{'connected_gene': 'ADAMDEC1', 'score': 0.31}, {'connected_gene': 'ADAM28', 'score': 0.21}, {'connected_gene': 'GC08P024271', 'score': 0.17}, {'connected_gene': 'LOC101929294', 'score': 0.08}, {'connected_gene': 'GC08P024089', 'score': 0.06}, {'connected_gene': 'ENSG00000253535', 'score': 0.03}]
chr8	GH08I024370	24370581	24371843	1.12	[{'connected_gene': 'ADAMDEC1', 'score': 0.39}, {'connected_gene': 'ADAM28', 'score': 0.18}, {'connected_gene': 'GC08P024271', 'score': 0.15}, {'connected_gene': 'LOC101929294', 'score': 0.1}, {'connected_gene': 'GC08P024089', 'score': 0.06}, {'connected_gene': 'ENSG00000253535', 'score': 0.03}]
chr8	GH08I024356	24356716	24358006	0.43	[{'connected_gene': 'ADAMDEC1', 'score': 16.94}, {'connected_gene': 'ENSG00000253535', 'score': 12.0}, {'connected_gene': 'ADAM28', 'score': 0.21}, {'connected_gene': 'GC08P024271', 'score': 0.17}, {'connected_gene': 'LOC101929294', 'score': 0.08}, {'connected_gene': 'GC08P024089', 'score': 0.06}]
chr8	GH08I024345	24345026	24345098	0.42	[{'connected_gene': 'ADAMDEC1', 'score': 13.38}, {'connected_gene': 'ENSG00000253535', 'score': 11.85}, {'connected_gene': 'ADAM28', 'score': 10.13}, {'connected_gene': 'GC08P024271', 'score': 0.19}, {'connected_gene': 'LOC101929294', 'score': 0.08}, {'connected_gene': 'GC08P024089', 'score': 0.07}]
chr8	GH08I024360	24360579	24364631	0.31	[{'connected_gene': 'ADAMDEC1', 'score': 18.49}, {'connected_gene': 'ENSG00000253535', 'score': 12.63}, {'connected_gene': 'ADAM28', 'score': 0.2}, {'connected_gene': 'GC08P024271', 'score': 0.16}, {'connected_gene': 'LOC101929294', 'score': 0.09}, {'connected_gene': 'GC08P024089', 'score': 0.06}]
chr8	GH08I024275	24275521	24278875	0.31	[{'connected_gene': 'ADAMDEC1', 'score': 12.17}, {'connected_gene': 'ENSG00000253535', 'score': 12.06}, {'connected_gene': 'GC08P024271', 'score': 0.44}, {'connected_gene': 'ADAM28', 'score': 0.37}, {'connected_gene': 'GC08P024089', 'score': 0.09}]
chr8	GH08I024228	24228558	24230082	1.05	[{'connected_gene': 'ADAMDEC1', 'score': 11.84}, {'connected_gene': 'ENSG00000253535', 'score': 11.77}, {'connected_gene': 'GC08M024224', 'score': 0.77}, {'connected_gene': 'GC08M024201', 'score': 0.34}, {'connected_gene': 'GC08P024089', 'score': 0.11}]
chr8	GH08I024225	24225541	24226108	0.4	[{'connected_gene': 'ADAMDEC1', 'score': 11.84}, {'connected_gene': 'ENSG00000253535', 'score': 11.76}, {'connected_gene': 'GC08M024224', 'score': 0.44}, {'connected_gene': 'GC08M024201', 'score': 0.37}, {'connected_gene': 'GC08P024089', 'score': 0.12}]
chr8	GH08I024337	24337299	24337578	0.4	[{'connected_gene': 'ADAM28', 'score': 5.72}, {'connected_gene': 'ADAMDEC1', 'score': 0.25}, {'connected_gene': 'GC08P024271', 'score': 0.2}, {'connected_gene': 'LOC101929294', 'score': 0.08}, {'connected_gene': 'GC08P024089', 'score': 0.07}, {'connected_gene': 'ENSG00000253535', 'score': 0.03}]
chr8	GH08I024339	24339468	24339617	0.63	[{'connected_gene': 'ADAM28', 'score': 5.94}, {'connected_gene': 'ADAMDEC1', 'score': 0.26}, {'connected_gene': 'GC08P024271', 'score': 0.2}, {'connected_gene': 'LOC101929294', 'score': 0.08}, {'connected_gene': 'GC08P024089', 'score': 0.07}, {'connected_gene': 'ENSG00000253535', 'score': 0.03}]
chr8	GH08I024334	24334885	24335180	0.42	[{'connected_gene': 'ADAM28', 'score': 13.19}, {'connected_gene': 'ADAMDEC1', 'score': 0.25}, {'connected_gene': 'GC08P024271', 'score': 0.21}, {'connected_gene': 'LOC101929294', 'score': 0.08}, {'connected_gene': 'GC08P024089', 'score': 0.07}, {'connected_gene': 'ENSG00000253535', 'score': 0.03}]
chr8	GH08I024318	24318947	24319089	0.44	[{'connected_gene': 'ADAM28', 'score': 8.99}, {'connected_gene': 'GC08P024271', 'score': 0.25}, {'connected_gene': 'ADAMDEC1', 'score': 0.2}, {'connected_gene': 'GC08P024089', 'score': 0.07}, {'connected_gene': 'LOC101929294', 'score': 0.07}, {'connected_gene': 'ENSG00000253535', 'score': 0.03}]
chr8	GH08I024293	24293428	24298804	1.93	[{'connected_gene': 'ADAM28', 'score': 569.75}, {'connected_gene': 'GC08P024271', 'score': 0.31}, {'connected_gene': 'ADAMDEC1', 'score': 0.17}, {'connected_gene': 'GC08P024089', 'score': 0.08}, {'connected_gene': 'LOC101929294', 'score': 0.07}, {'connected_gene': 'ENSG00000253535', 'score': 0.03}]
chr8	GH08I024347	24347569	24348002	0.48	[{'connected_gene': 'ADAM28', 'score': 19.58}, {'connected_gene': 'ENSG00000253535', 'score': 12.26}, {'connected_gene': 'ADAMDEC1', 'score': 0.28}, {'connected_gene': 'GC08P024271', 'score': 0.18}, {'connected_gene': 'LOC101929294', 'score': 0.08}, {'connected_gene': 'GC08P024089', 'score': 0.07}]
chr8	GH08I024366	24366373	24368097	1.17	[{'connected_gene': 'ADAM28', 'score': 19.63}, {'connected_gene': 'ENSG00000253535', 'score': 12.63}, {'connected_gene': 'ADAMDEC1', 'score': 6.02}, {'connected_gene': 'GC08P024271', 'score': 0.15}, {'connected_gene': 'LOC101929294', 'score': 0.09}, {'connected_gene': 'GC08P024089', 'score': 0.06}]
chr8	GH08I024348	24348723	24351056	1.3	[{'connected_gene': 'ENSG00000253535', 'score': 12.26}, {'connected_gene': 'ADAM28', 'score': 7.14}, {'connected_gene': 'ADAMDEC1', 'score': 2.19}, {'connected_gene': 'GC08P024271', 'score': 0.18}, {'connected_gene': 'LOC101929294', 'score': 0.08}, {'connected_gene': 'GC08P024089', 'score': 0.07}]
chr8	GH08I024271	24271285	24273069	1.19	[{'connected_gene': 'GC08P024271', 'score': 550.77}, {'connected_gene': 'ENSG00000253535', 'score': 12.06}, {'connected_gene': 'ADAM28', 'score': 4.09}, {'connected_gene': 'ADAMDEC1', 'score': 1.34}, {'connected_gene': 'GC08P024089', 'score': 0.09}]