PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000373256	[[39016573, 39016694], [39024172, 39024269], [39025247, 39025355], [39033486, 39033605], [39033972, 39034079], [39040637, 39040791], [39041385, 39041545], [39046097, 39046158], [39046732, 39046802], [39046887, 39046976], [39047339, 39047478], [39048473, 39048515], [39053681, 39055519]]	[[39016616, 39016694], [39024172, 39024269], [39025247, 39025355], [39033486, 39033605], [39033972, 39034079], [39040637, 39040791], [39041385, 39041545], [39046097, 39046158], [39046732, 39046802], [39046887, 39046976], [39047339, 39047478], [39048473, 39048515], [39053681, 39053849]]
NR_136562	[[39016556, 39016694], [39024172, 39024269], [39025247, 39025355], [39033486, 39033605], [39033972, 39034079], [39040637, 39040791], [39041385, 39041545], [39046097, 39046158], [39046732, 39046802], [39046887, 39046976], [39047339, 39047478], [39048473, 39048515], [39053681, 39053905], [39055119, 39059079]]	None
NR_136563	[[39016556, 39016694], [39024172, 39024269], [39025247, 39025355], [39033486, 39033605], [39033972, 39034079], [39040637, 39040791], [39041385, 39041545], [39046097, 39046158], [39046732, 39046802], [39046887, 39046976], [39047339, 39047478], [39048473, 39048515], [39053681, 39053905], [39054063, 39059079]]	None
NM_002062	[[39016556, 39016694], [39024172, 39024269], [39025247, 39025355], [39033486, 39033605], [39033972, 39034079], [39040637, 39040791], [39041385, 39041545], [39046097, 39046158], [39046732, 39046802], [39046887, 39046976], [39047339, 39047478], [39048473, 39048515], [39053681, 39059079]]	[[39016616, 39016694], [39024172, 39024269], [39025247, 39025355], [39033486, 39033605], [39033972, 39034079], [39040637, 39040791], [39041385, 39041545], [39046097, 39046158], [39046732, 39046802], [39046887, 39046976], [39047339, 39047478], [39048473, 39048515], [39053681, 39053849]]

Promoter

Chrom	Start	End	Description
chr6	39016551	39016566	CAGE_peak_1_at_GLP1R_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I039272	39272865	39273824	0.31	[{'connected_gene': 'KCNK17', 'score': 11.9}, {'connected_gene': 'KCNK5', 'score': 11.58}, {'connected_gene': 'KCNK16', 'score': 10.99}, {'connected_gene': 'GLP1R', 'score': 10.6}, {'connected_gene': 'SAYSD1', 'score': 10.35}, {'connected_gene': 'PIR44224', 'score': 0.29}, {'connected_gene': 'GC06M039593', 'score': 0.12}]
chr6	GH06I039273	39272203	39272752	0.31	[{'connected_gene': 'KCNK17', 'score': 16.21}, {'connected_gene': 'KCNK5', 'score': 11.42}, {'connected_gene': 'GLP1R', 'score': 10.6}, {'connected_gene': 'KCNK16', 'score': 10.08}, {'connected_gene': 'SAYSD1', 'score': 9.9}, {'connected_gene': 'PIR44224', 'score': 0.28}, {'connected_gene': 'GC06M039593', 'score': 0.12}]
chr6	GH06I039266	39266945	39267094	0.57	[{'connected_gene': 'KCNK17', 'score': 11.88}, {'connected_gene': 'KCNK5', 'score': 11.43}, {'connected_gene': 'GLP1R', 'score': 10.61}, {'connected_gene': 'KCNK16', 'score': 10.07}, {'connected_gene': 'SAYSD1', 'score': 9.9}, {'connected_gene': 'PIR44224', 'score': 0.26}, {'connected_gene': 'GC06M039593', 'score': 0.12}]
chr6	GH06I039269	39269655	39271677	0.69	[{'connected_gene': 'KCNK17', 'score': 16.46}, {'connected_gene': 'KCNK5', 'score': 11.42}, {'connected_gene': 'GLP1R', 'score': 10.6}, {'connected_gene': 'KCNK16', 'score': 10.08}, {'connected_gene': 'SAYSD1', 'score': 9.9}, {'connected_gene': 'PIR44224', 'score': 0.28}, {'connected_gene': 'GC06M039593', 'score': 0.12}]
chr6	GH06I039267	39267838	39269028	0.43	[{'connected_gene': 'KCNK17', 'score': 11.88}, {'connected_gene': 'KCNK5', 'score': 11.43}, {'connected_gene': 'GLP1R', 'score': 10.61}, {'connected_gene': 'KCNK16', 'score': 10.08}, {'connected_gene': 'SAYSD1', 'score': 9.9}, {'connected_gene': 'PIR44224', 'score': 0.28}, {'connected_gene': 'GC06M039593', 'score': 0.12}]
chr6	GH06I039312	39312908	39313315	0.59	[{'connected_gene': 'KCNK17', 'score': 579.7}, {'connected_gene': 'LOC105375047', 'score': 550.77}, {'connected_gene': 'KCNK16', 'score': 41.6}, {'connected_gene': 'GLP1R', 'score': 2.34}, {'connected_gene': 'SAYSD1', 'score': 1.81}, {'connected_gene': 'GC06M039592', 'score': 0.77}, {'connected_gene': 'GC06M039593', 'score': 0.16}]
chr6	GH06I039239	39239455	39241109	0.2	[{'connected_gene': 'KCNK5', 'score': 11.16}, {'connected_gene': 'KCNK17', 'score': 11.13}, {'connected_gene': 'GLP1R', 'score': 9.52}, {'connected_gene': 'PIR44224', 'score': 0.2}, {'connected_gene': 'GC06M039593', 'score': 0.1}]
chr6	GH06I039049	39048809	39053694	0.6	[{'connected_gene': 'KCNK5', 'score': 9.25}, {'connected_gene': 'GLP1R', 'score': 5.47}, {'connected_gene': 'DNAH8', 'score': 5.03}, {'connected_gene': 'LOC105375046', 'score': 0.31}]
chr6	GH06I039053	39053713	39055407	0.46	[{'connected_gene': 'KCNK5', 'score': 9.25}, {'connected_gene': 'GLP1R', 'score': 0.44}, {'connected_gene': 'LOC105375046', 'score': 0.34}]
chr6	GH06I039320	39320154	39320510	0.59	[{'connected_gene': 'KCNK16', 'score': 61.58}, {'connected_gene': 'KCNK17', 'score': 29.62}, {'connected_gene': 'GLP1R', 'score': 2.15}, {'connected_gene': 'SAYSD1', 'score': 1.8}, {'connected_gene': 'LOC105375047', 'score': 0.44}, {'connected_gene': 'GC06M039593', 'score': 0.17}]
chr6	GH06I039067	39067253	39069193	0.31	[{'connected_gene': 'SAYSD1', 'score': 16.83}, {'connected_gene': 'KCNK17', 'score': 10.82}, {'connected_gene': 'KCNK16', 'score': 10.23}, {'connected_gene': 'KCNK5', 'score': 9.91}, {'connected_gene': 'GLP1R', 'score': 5.3}, {'connected_gene': 'LOC105375046', 'score': 0.39}]
chr6	GH06I039098	39098701	39101009	0.38	[{'connected_gene': 'SAYSD1', 'score': 15.62}, {'connected_gene': 'GLP1R', 'score': 11.05}, {'connected_gene': 'KCNK17', 'score': 10.82}, {'connected_gene': 'KCNK5', 'score': 10.45}, {'connected_gene': 'PIR34726', 'score': 0.77}, {'connected_gene': 'GC06M039564', 'score': 0.77}, {'connected_gene': 'LOC105375046', 'score': 0.34}]
chr6	GH06I039088	39088425	39088594	0.83	[{'connected_gene': 'SAYSD1', 'score': 11.64}, {'connected_gene': 'GLP1R', 'score': 11.1}, {'connected_gene': 'LOC105375046', 'score': 0.44}, {'connected_gene': 'PIR34726', 'score': 0.39}, {'connected_gene': 'GC06M039564', 'score': 0.39}]
chr6	GH06I039166	39166525	39166694	0.85	[{'connected_gene': 'GLP1R', 'score': 4.91}, {'connected_gene': 'PIR34969', 'score': 0.34}, {'connected_gene': 'KCNK5', 'score': 0.21}, {'connected_gene': 'GC06M039593', 'score': 0.07}]
chr6	GH06I039071	39071335	39078279	0.49	[{'connected_gene': 'GLP1R', 'score': 18.26}, {'connected_gene': 'SAYSD1', 'score': 18.04}, {'connected_gene': 'KCNK5', 'score': 10.02}, {'connected_gene': 'LOC105375046', 'score': 0.77}]
chr6	GH06I039084	39084267	39085515	0.43	[{'connected_gene': 'GLP1R', 'score': 22.27}, {'connected_gene': 'SAYSD1', 'score': 21.68}, {'connected_gene': 'GLO1', 'score': 4.45}, {'connected_gene': 'LOC105375046', 'score': 0.44}, {'connected_gene': 'PIR34726', 'score': 0.37}, {'connected_gene': 'GC06M039564', 'score': 0.37}]
chr6	GH06I039082	39082320	39084252	0.52	[{'connected_gene': 'GLP1R', 'score': 22.9}, {'connected_gene': 'SAYSD1', 'score': 22.52}, {'connected_gene': 'DAAM2', 'score': 4.8}, {'connected_gene': 'LOC105375046', 'score': 0.77}, {'connected_gene': 'PIR34726', 'score': 0.34}, {'connected_gene': 'GC06M039564', 'score': 0.34}]
chr6	GH06I039093	39093408	39093418	0.8	[{'connected_gene': 'GLP1R', 'score': 12.5}, {'connected_gene': 'SAYSD1', 'score': 12.16}, {'connected_gene': 'PIR34726', 'score': 0.39}, {'connected_gene': 'GC06M039564', 'score': 0.39}, {'connected_gene': 'LOC105375046', 'score': 0.39}]
chr6	GH06I039055	39055780	39057050	0.43	[{'connected_gene': 'GLP1R', 'score': 5.84}, {'connected_gene': 'LOC105375046', 'score': 0.34}]
chr6	GH06I039035	39035639	39036148	0.38	[{'connected_gene': 'GLP1R', 'score': 4.73}, {'connected_gene': 'LOC100128655', 'score': 0.77}, {'connected_gene': 'LOC100131047', 'score': 0.18}]
chr6	GH06I039048	39048732	39048791	0.93	[{'connected_gene': 'GLP1R', 'score': 550.77}, {'connected_gene': 'LOC100128655', 'score': 0.44}]
chr6	GH06I039059	39059267	39063924	0.87	[{'connected_gene': 'ANKRD18EP', 'score': 11.72}, {'connected_gene': 'SAYSD1', 'score': 10.89}, {'connected_gene': 'KCNK17', 'score': 10.83}, {'connected_gene': 'GLP1R', 'score': 9.72}, {'connected_gene': 'LOC105375046', 'score': 0.37}]
chr6	GH06I039040	39040330	39041566	0.46	[{'connected_gene': 'LOC100128655', 'score': 550.77}, {'connected_gene': 'GLP1R', 'score': 0.44}]
chr6	GH06I039114	39114032	39116117	2.29	[{'connected_gene': 'GC06M039568', 'score': 550.77}, {'connected_gene': 'PIR35108', 'score': 550.77}, {'connected_gene': 'PIR34348', 'score': 550.77}, {'connected_gene': 'GC06M039563', 'score': 550.77}, {'connected_gene': 'GC06M039567', 'score': 550.77}, {'connected_gene': 'GC06M039586', 'score': 550.77}, {'connected_gene': 'PIR44528', 'score': 550.77}, {'connected_gene': 'GC06M039570', 'score': 550.77}, {'connected_gene': 'SAYSD1', 'score': 550.77}, {'connected_gene': 'KCNK17', 'score': 10.9}, {'connected_gene': 'GLP1R', 'score': 10.04}, {'connected_gene': 'PIRC27', 'score': 0.37}, {'connected_gene': 'GC06M039593', 'score': 0.06}]
chr6	GH06I039101	39101565	39102681	1.07	[{'connected_gene': 'PIR34726', 'score': 550.77}, {'connected_gene': 'GC06M039564', 'score': 550.77}, {'connected_gene': 'SAYSD1', 'score': 13.21}, {'connected_gene': 'GLP1R', 'score': 10.94}, {'connected_gene': 'KCNK17', 'score': 10.82}, {'connected_gene': 'KCNK5', 'score': 10.45}, {'connected_gene': 'LOC105375046', 'score': 0.34}, {'connected_gene': 'GC06M039593', 'score': 0.06}]