Visualization of regulatory element with DNMs in transcripts



Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.

Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000239032 [[120352915, 120354762], [120355027, 120355160]] [[120353643, 120354756]]
ENST00000369169 [[120352960, 120354756]] [[120353643, 120354756]]
NM_004248 [[120352915, 120354762], [120355027, 120355160]] [[120353643, 120354756]]
Promoter
Chrom Start End Description
chr10 120355149 120355165 CAGE_peak_1_at_PRLHR_5end

Enhancer
Chrom Start End Genehancer ID Score Attributes
chr10 GH10I118568 118568323 118568800 0.84 [{'connected_gene': 'PRLHR', 'score': 11.95}, {'connected_gene': 'SLC25A18P1', 'score': 0.77}, {'connected_gene': 'GC10P118535', 'score': 0.28}, {'connected_gene': 'GC10P118534', 'score': 0.28}]
chr10 GH10I118595 118595633 118595692 0.61 [{'connected_gene': 'PRLHR', 'score': 550.77}, {'connected_gene': 'SLC25A18P1', 'score': 0.34}]
chr10 GH10I118594 118594509 118594658 0.6 [{'connected_gene': 'PRLHR', 'score': 0.44}, {'connected_gene': 'SLC25A18P1', 'score': 0.34}]
chr10 GH10I118596 118596209 118596338 0.63 [{'connected_gene': 'PRLHR', 'score': 0.77}, {'connected_gene': 'SLC25A18P1', 'score': 0.34}]
chr10 GH10I118597 118595969 118596078 0.52 [{'connected_gene': 'PRLHR', 'score': 0.77}, {'connected_gene': 'SLC25A18P1', 'score': 0.34}]
chr10 GH10I118495 118495236 118496090 0.72 [{'connected_gene': 'PRLHR', 'score': 5.16}, {'connected_gene': 'LOC105378507', 'score': 0.77}, {'connected_gene': 'GC10P118488', 'score': 0.44}]
chr10 GH10I118797 118797956 118799150 0.54 [{'connected_gene': 'PRLHR', 'score': 11.13}, {'connected_gene': 'GC10M118785', 'score': 0.39}, {'connected_gene': 'PIR53333', 'score': 0.37}]
chr10 GH10I118729 118729001 118733636 0.95 [{'connected_gene': 'CACUL1', 'score': 27.92}, {'connected_gene': 'PRLHR', 'score': 10.69}, {'connected_gene': 'GC10P118694', 'score': 0.28}]
chr10 GH10I118728 118728201 118728600 0.2 [{'connected_gene': 'CACUL1', 'score': 42.89}, {'connected_gene': 'PRLHR', 'score': 10.7}, {'connected_gene': 'GC10P118694', 'score': 0.29}]
chr10 GH10I118725 118725829 118726734 1.03 [{'connected_gene': 'CACUL1', 'score': 42.89}, {'connected_gene': 'PRLHR', 'score': 10.7}, {'connected_gene': 'GC10P118694', 'score': 0.29}]
chr10 GH10I118571 118571000 118571550 0.2 [{'connected_gene': 'SLC25A18P1', 'score': 550.77}, {'connected_gene': 'PRLHR', 'score': 18.66}, {'connected_gene': 'GC10P118535', 'score': 0.26}, {'connected_gene': 'GC10P118534', 'score': 0.26}]