PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000439131	[[78227172, 78227459], [78235740, 78236085]]	[[78235742, 78236021]]
ENST00000355883	[[78227176, 78227459], [78234794, 78234808], [78235740, 78236085]]	[[78227385, 78227459], [78234794, 78234808], [78235740, 78236021]]
ENST00000557011	[[78227316, 78227459], [78235740, 78236071]]	[[78227385, 78227459], [78235740, 78235741]]
ENST00000556047	[[78227316, 78227459], [78234794, 78234866], [78235740, 78236071]]	[[78227385, 78227459], [78234794, 78234834]]
NM_001173978	[[78227172, 78227459], [78235740, 78236085]]	[[78235742, 78236021]]
NM_174943	[[78227172, 78227459], [78234794, 78234808], [78235740, 78236085]]	[[78227385, 78227459], [78234794, 78234808], [78235740, 78236021]]

Promoter

Chrom	Start	End	Description
chr14	78226880	78226939	CAGE_peak_1_at_C14orf178_5end
chr14	78227105	78227137	CAGE_peak_2_at_C14orf178_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I077706	77706838	77710052	2.01	[{'connected_gene': 'SLIRP', 'score': 556.82}, {'connected_gene': 'ALKBH1', 'score': 550.77}, {'connected_gene': 'C14orf178', 'score': 5.05}, {'connected_gene': 'ADCK1', 'score': 4.66}]
chr14	GH14I077799	77799518	77801050	2.04	[{'connected_gene': 'ADCK1', 'score': 556.76}, {'connected_gene': 'RPL21P10', 'score': 23.15}, {'connected_gene': 'C14orf178', 'score': 19.6}, {'connected_gene': 'ZMYND19P1', 'score': 12.9}, {'connected_gene': 'IRF2BPL', 'score': 11.12}, {'connected_gene': 'ALKBH1', 'score': 11.01}, {'connected_gene': 'SNW1', 'score': 9.92}, {'connected_gene': 'RPL22P2', 'score': 9.86}, {'connected_gene': 'ENSG00000199440', 'score': 0.34}, {'connected_gene': 'GC14M077822', 'score': 0.34}]
chr14	GH14I077663	77663253	77664152	1.01	[{'connected_gene': 'ADCK1', 'score': 37.68}, {'connected_gene': 'C14orf178', 'score': 13.44}, {'connected_gene': 'SLIRP', 'score': 8.57}, {'connected_gene': 'SNW1', 'score': 7.94}, {'connected_gene': 'RPL21P10', 'score': 5.46}, {'connected_gene': 'GC14P077671', 'score': 0.44}, {'connected_gene': 'COX6CP11', 'score': 0.39}]
chr14	GH14I077729	77729867	77731913	0.38	[{'connected_gene': 'ADCK1', 'score': 38.52}, {'connected_gene': 'C14orf178', 'score': 26.47}, {'connected_gene': 'SNW1', 'score': 11.72}, {'connected_gene': 'SLIRP', 'score': 11.32}, {'connected_gene': 'ALKBH1', 'score': 11.32}, {'connected_gene': 'RPL21P10', 'score': 6.58}]
chr14	GH14I077660	77660732	77661380	0.43	[{'connected_gene': 'ADCK1', 'score': 37.67}, {'connected_gene': 'C14orf178', 'score': 20.31}, {'connected_gene': 'SNW1', 'score': 5.84}, {'connected_gene': 'COX6CP11', 'score': 0.44}, {'connected_gene': 'GC14P077671', 'score': 0.39}]
chr14	GH14I077763	77763418	77763567	0.2	[{'connected_gene': 'ADCK1', 'score': 11.71}, {'connected_gene': 'C14orf178', 'score': 5.58}, {'connected_gene': 'SNW1', 'score': 0.77}]
chr14	GH14I077790	77790562	77791828	0.54	[{'connected_gene': 'RPL21P10', 'score': 16.91}, {'connected_gene': 'C14orf178', 'score': 13.66}, {'connected_gene': 'ADCK1', 'score': 0.44}, {'connected_gene': 'SNW1', 'score': 0.31}]
chr14	GH14I077674	77674918	77675147	0.2	[{'connected_gene': 'C14orf178', 'score': 20.88}, {'connected_gene': 'SLIRP', 'score': 5.02}, {'connected_gene': 'ADCK1', 'score': 4.62}, {'connected_gene': 'GC14P077671', 'score': 0.77}, {'connected_gene': 'RPL21P10', 'score': 0.44}, {'connected_gene': 'ALKBH1', 'score': 0.29}]
chr14	GH14I077795	77795522	77796982	0.85	[{'connected_gene': 'C14orf178', 'score': 17.58}, {'connected_gene': 'SLIRP', 'score': 6.5}, {'connected_gene': 'ADCK1', 'score': 5.15}, {'connected_gene': 'SNW1', 'score': 0.28}]
chr14	GH14I077768	77768601	77769000	0.2	[{'connected_gene': 'C14orf178', 'score': 21.15}, {'connected_gene': 'ADCK1', 'score': 13.07}, {'connected_gene': 'SNW1', 'score': 0.44}]
chr14	GH14I077657	77657201	77657800	0.49	[{'connected_gene': 'C14orf178', 'score': 20.4}, {'connected_gene': 'ADCK1', 'score': 5.1}, {'connected_gene': 'COX6CP11', 'score': 0.77}, {'connected_gene': 'GC14P077671', 'score': 0.39}]
chr14	GH14I077759	77759690	77762187	2	[{'connected_gene': 'C14orf178', 'score': 571.48}, {'connected_gene': 'SNW1', 'score': 559.04}, {'connected_gene': 'RPL21P10', 'score': 17.0}, {'connected_gene': 'ADCK1', 'score': 11.71}, {'connected_gene': 'SLIRP', 'score': 0.23}]
chr14	GH14I077659	77659663	77660600	0.38	[{'connected_gene': 'C14orf178', 'score': 20.19}, {'connected_gene': 'COX6CP11', 'score': 0.44}, {'connected_gene': 'GC14P077671', 'score': 0.39}]
chr14	GH14I077658	77658801	77659000	0.2	[{'connected_gene': 'C14orf178', 'score': 20.3}, {'connected_gene': 'COX6CP11', 'score': 0.44}, {'connected_gene': 'GC14P077671', 'score': 0.39}]
chr14	GH14I077737	77737860	77739504	0.38	[{'connected_gene': 'SNW1', 'score': 0.34}, {'connected_gene': 'C14orf178', 'score': 0.34}, {'connected_gene': 'SLIRP', 'score': 0.29}]
chr14	GH14I077728	77728501	77728737	0.34	[{'connected_gene': 'SNW1', 'score': 11.72}, {'connected_gene': 'C14orf178', 'score': 11.72}, {'connected_gene': 'SLIRP', 'score': 0.34}]