PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000564085	[[77756410, 77756514], [77759327, 77759481], [77769724, 77769883], [77770546, 77770640], [77775478, 77775866]]	[[77756479, 77756514], [77759327, 77759481], [77769724, 77769883], [77770546, 77770640], [77775478, 77775549]]
ENST00000268533	[[77756410, 77756514], [77759327, 77759481], [77769724, 77769883], [77775478, 77776157]]	[[77756479, 77756514], [77759327, 77759481], [77769724, 77769883], [77775478, 77775847]]
ENST00000568787	[[77756412, 77756514], [77759327, 77759481], [77769724, 77770146]]	[[77756479, 77756514], [77759327, 77759481], [77769724, 77769898]]
ENST00000437314	[[77756415, 77756514], [77759327, 77759481], [77775478, 77776155]]	[[77756479, 77756514], [77759327, 77759481], [77775478, 77775847]]
ENST00000563839	[[77756441, 77756514], [77775478, 77775721]]	[[77756479, 77756514], [77775478, 77775491]]
ENST00000564031	[[77771301, 77771350], [77775478, 77776154]]	None
NM_001243661	[[77756388, 77756514], [77759327, 77759481], [77775478, 77776157]]	[[77756479, 77756514], [77759327, 77759481], [77775478, 77775847]]
NM_001105663	[[77756388, 77756514], [77759327, 77759481], [77769724, 77769883], [77775478, 77776157]]	[[77756479, 77756514], [77759327, 77759481], [77769724, 77769883], [77775478, 77775847]]
NM_001243657	[[77756388, 77756514], [77759327, 77759481], [77769724, 77769883], [77770546, 77770640], [77775478, 77776157]]	[[77756479, 77756514], [77759327, 77759481], [77769724, 77769883], [77770546, 77770640], [77775478, 77775549]]
NM_001243660	[[77756388, 77756514], [77759327, 77759481], [77769290, 77769404], [77775478, 77776157]]	[[77756479, 77756514], [77759327, 77759481], [77769290, 77769404], [77775478, 77775847]]

Promoter

Chrom	Start	End	Description
chr16	77756370	77756383	CAGE_peak_2_at_NUDT7_5end
chr16	77756399	77756444	CAGE_peak_1_at_NUDT7_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr16	GH16I077970	77970953	77972282	0.66	[{'connected_gene': 'NUDT7', 'score': 10.96}, {'connected_gene': 'VAT1L', 'score': 10.49}, {'connected_gene': 'WWOX', 'score': 9.83}, {'connected_gene': 'LOC105371351', 'score': 0.34}, {'connected_gene': 'CLEC3A', 'score': 0.23}]
chr16	GH16I077688	77688102	77688238	0.22	[{'connected_gene': 'NUDT7', 'score': 12.22}, {'connected_gene': 'VAT1L', 'score': 10.92}, {'connected_gene': 'WWOX', 'score': 2.61}, {'connected_gene': 'ENSG00000278862', 'score': 0.29}]
chr16	GH16I077951	77951904	77952053	0.52	[{'connected_gene': 'NUDT7', 'score': 10.53}, {'connected_gene': 'VAT1L', 'score': 10.1}, {'connected_gene': 'LOC105371351', 'score': 0.77}, {'connected_gene': 'CLEC3A', 'score': 0.19}]
chr16	GH16I077676	77675844	77676013	0.76	[{'connected_gene': 'NUDT7', 'score': 16.31}, {'connected_gene': 'VAT1L', 'score': 10.53}, {'connected_gene': 'CLEC3A', 'score': 10.37}, {'connected_gene': 'WWOX', 'score': 9.88}, {'connected_gene': 'ENSG00000278862', 'score': 0.37}]
chr16	GH16I077675	77675061	77675278	0.44	[{'connected_gene': 'NUDT7', 'score': 11.54}, {'connected_gene': 'VAT1L', 'score': 10.53}, {'connected_gene': 'CLEC3A', 'score': 10.37}, {'connected_gene': 'WWOX', 'score': 9.88}, {'connected_gene': 'ENSG00000278862', 'score': 0.37}]
chr16	GH16I077677	77677224	77677373	0.46	[{'connected_gene': 'NUDT7', 'score': 16.98}, {'connected_gene': 'VAT1L', 'score': 10.53}, {'connected_gene': 'CLEC3A', 'score': 10.37}, {'connected_gene': 'WWOX', 'score': 9.88}, {'connected_gene': 'ENSG00000278862', 'score': 0.34}]
chr16	GH16I077764	77764004	77765028	0.59	[{'connected_gene': 'NUDT7', 'score': 16.16}, {'connected_gene': 'VAT1L', 'score': 0.34}, {'connected_gene': 'ENSG00000261707', 'score': 0.34}]
chr16	GH16I077760	77760100	77761413	0.57	[{'connected_gene': 'NUDT7', 'score': 18.11}, {'connected_gene': 'ENSG00000261707', 'score': 0.37}, {'connected_gene': 'VAT1L', 'score': 0.31}]
chr16	GH16I077779	77779997	77781117	0.85	[{'connected_gene': 'NUDT7', 'score': 16.21}, {'connected_gene': 'VAT1L', 'score': 0.44}, {'connected_gene': 'ENSG00000261707', 'score': 0.28}]
chr16	GH16I077417	77417861	77419056	0.31	[{'connected_gene': 'NUDT7', 'score': 4.7}, {'connected_gene': 'ENSG00000260701', 'score': 0.39}, {'connected_gene': 'ADAMTS18', 'score': 0.37}, {'connected_gene': 'ENSG00000261063', 'score': 0.1}]
chr16	GH16I077419	77419067	77419847	0.43	[{'connected_gene': 'NUDT7', 'score': 4.69}, {'connected_gene': 'ENSG00000260701', 'score': 0.39}, {'connected_gene': 'ADAMTS18', 'score': 0.37}, {'connected_gene': 'ENSG00000261063', 'score': 0.1}]
chr16	GH16I077939	77939044	77939193	0.46	[{'connected_gene': 'NUDT7', 'score': 4.78}, {'connected_gene': 'LOC105371351', 'score': 0.39}, {'connected_gene': 'PPIAP50', 'score': 0.25}, {'connected_gene': 'VAT1L', 'score': 0.1}]
chr16	GH16I077721	77721818	77724356	2.01	[{'connected_gene': 'NUDT7', 'score': 580.38}, {'connected_gene': 'ENSG00000261707', 'score': 8.8}]
chr16	GH16I077966	77965739	77969136	0.49	[{'connected_gene': 'CLEC3A', 'score': 19.5}, {'connected_gene': 'WWOX', 'score': 14.86}, {'connected_gene': 'NUDT7', 'score': 11.24}, {'connected_gene': 'VAT1L', 'score': 10.5}, {'connected_gene': 'LOC105371351', 'score': 0.37}]
chr16	GH16I077961	77961011	77964636	0.65	[{'connected_gene': 'CLEC3A', 'score': 15.95}, {'connected_gene': 'NUDT7', 'score': 11.24}, {'connected_gene': 'VAT1L', 'score': 10.25}, {'connected_gene': 'WWOX', 'score': 5.41}, {'connected_gene': 'LOC105371351', 'score': 0.39}]
chr16	GH16I077965	77965239	77965732	0.31	[{'connected_gene': 'CLEC3A', 'score': 16.0}, {'connected_gene': 'NUDT7', 'score': 11.24}, {'connected_gene': 'VAT1L', 'score': 10.25}, {'connected_gene': 'LOC105371351', 'score': 0.37}]
chr16	GH16I077573	77573665	77576631	0.69	[{'connected_gene': 'SYCE1L', 'score': 32.58}, {'connected_gene': 'NUDT7', 'score': 4.91}, {'connected_gene': 'LINC02131', 'score': 0.37}, {'connected_gene': 'LOC105376775', 'score': 0.22}]
chr16	GH16I077732	77732042	77733475	0.67	[{'connected_gene': 'ENSG00000261707', 'score': 14.99}, {'connected_gene': 'NUDT7', 'score': 13.56}, {'connected_gene': 'VAT1L', 'score': 11.26}]
chr16	GH16I077657	77657104	77657253	0.74	[{'connected_gene': 'ENSG00000278862', 'score': 550.77}, {'connected_gene': 'NUDT7', 'score': 11.24}, {'connected_gene': 'CLEC3A', 'score': 10.54}]