PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000324436	[[8807750, 8809172]]	[[8807800, 8809051]]
NM_178525	[[8807746, 8809180]]	[[8807800, 8809051]]

Promoter

Chrom	Start	End	Description
chr19	8809102	8809109	CAGE_peak_3_at_ACTL9_5end
chr19	8809120	8809133	CAGE_peak_2_at_ACTL9_5end
chr19	8809139	8809158	CAGE_peak_1_at_ACTL9_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr19	GH19I008637	8637801	8641251	1.37	[{'connected_gene': 'MYO1F', 'score': 31.26}, {'connected_gene': 'ADAMTS10', 'score': 12.1}, {'connected_gene': 'ACTL9', 'score': 11.65}, {'connected_gene': 'PRAM1', 'score': 5.76}, {'connected_gene': 'LOC100128428', 'score': 4.78}, {'connected_gene': 'LINC01862', 'score': 0.44}, {'connected_gene': 'ENSG00000261866', 'score': 0.28}, {'connected_gene': 'GC19P008677', 'score': 0.28}]
chr19	GH19I009043	9043585	9043734	0.46	[{'connected_gene': 'ACTL9', 'score': 11.05}, {'connected_gene': 'MBD3L1', 'score': 10.75}, {'connected_gene': 'TRQ-TTG8-1', 'score': 0.77}, {'connected_gene': 'GC19P009058', 'score': 0.39}]
chr19	GH19I008663	8663816	8665004	0.8	[{'connected_gene': 'ACTL9', 'score': 12.92}, {'connected_gene': 'ADAMTS10', 'score': 11.32}, {'connected_gene': 'ZNF559', 'score': 4.2}, {'connected_gene': 'ENSG00000261866', 'score': 0.39}, {'connected_gene': 'GC19P008677', 'score': 0.39}, {'connected_gene': 'LINC01862', 'score': 0.29}]
chr19	GH19I008665	8665781	8667231	0.46	[{'connected_gene': 'ACTL9', 'score': 12.92}, {'connected_gene': 'ADAMTS10', 'score': 11.31}, {'connected_gene': 'ENSG00000261866', 'score': 0.39}, {'connected_gene': 'GC19P008677', 'score': 0.39}, {'connected_gene': 'LINC01862', 'score': 0.28}]
chr19	GH19I008701	8701579	8702658	0.72	[{'connected_gene': 'ACTL9', 'score': 0.77}, {'connected_gene': 'OR2Z1', 'score': 0.37}]
chr19	GH19I008699	8698785	8698844	0.73	[{'connected_gene': 'ACTL9', 'score': 550.77}, {'connected_gene': 'ENSG00000279426', 'score': 0.77}, {'connected_gene': 'GC19P008695', 'score': 0.77}]
chr19	GH19I008878	8878382	8878565	0.65	[{'connected_gene': 'PIR31457', 'score': 550.77}, {'connected_gene': 'ACTL9', 'score': 14.9}, {'connected_gene': 'MUC16', 'score': 6.4}, {'connected_gene': 'ZNF177', 'score': 1.91}, {'connected_gene': 'OR7G1', 'score': 1.52}, {'connected_gene': 'GC19P008942', 'score': 0.21}]
chr19	GH19I008698	8698231	8698380	0.57	[{'connected_gene': 'ENSG00000279426', 'score': 550.77}, {'connected_gene': 'ACTL9', 'score': 550.77}, {'connected_gene': 'GC19P008695', 'score': 0.77}]