PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr7	44084233	44084244	CAGE_peak_2_at_DBNL_5end
chr7	44084262	44084332	CAGE_peak_1_at_DBNL_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr7	GH07I043693	43693001	43695623	1.3	[{'connected_gene': 'STK17A', 'score': 27.04}, {'connected_gene': 'BLVRA', 'score': 15.83}, {'connected_gene': 'COA1', 'score': 11.97}, {'connected_gene': 'MRPS24', 'score': 10.57}, {'connected_gene': 'LINC00957', 'score': 6.06}, {'connected_gene': 'DBNL', 'score': 1.74}, {'connected_gene': 'GC07M043624', 'score': 0.2}]
chr7	GH07I043615	43615213	43615576	0.61	[{'connected_gene': 'STK17A', 'score': 20.82}, {'connected_gene': 'BLVRA', 'score': 10.35}, {'connected_gene': 'POLM', 'score': 2.65}, {'connected_gene': 'DBNL', 'score': 2.33}, {'connected_gene': 'URGCP', 'score': 1.12}, {'connected_gene': 'PIR50622', 'score': 0.77}, {'connected_gene': 'GC07P043619', 'score': 0.77}, {'connected_gene': 'PIR39554', 'score': 0.44}, {'connected_gene': 'COA1', 'score': 0.14}]
chr7	GH07I043781	43781642	43783400	1.31	[{'connected_gene': 'STK17A', 'score': 13.98}, {'connected_gene': 'BLVRA', 'score': 10.77}, {'connected_gene': 'LINC00957', 'score': 5.72}, {'connected_gene': 'UBE2D4', 'score': 4.62}, {'connected_gene': 'DBNL', 'score': 1.7}, {'connected_gene': 'ENSG00000229497', 'score': 0.37}, {'connected_gene': 'PIR43622', 'score': 0.28}, {'connected_gene': 'LOC102724946', 'score': 0.22}]
chr7	GH07I043642	43642570	43652994	1.56	[{'connected_gene': 'STK17A', 'score': 28.08}, {'connected_gene': 'COA1', 'score': 23.66}, {'connected_gene': 'BLVRA', 'score': 15.77}, {'connected_gene': 'ENSG00000241057', 'score': 4.37}, {'connected_gene': 'DBNL', 'score': 1.93}, {'connected_gene': 'POLM', 'score': 1.5}, {'connected_gene': 'GC07M043624', 'score': 0.34}]
chr7	GH07I043628	43628224	43634508	1.09	[{'connected_gene': 'STK17A', 'score': 39.46}, {'connected_gene': 'COA1', 'score': 26.32}, {'connected_gene': 'BLVRA', 'score': 15.58}, {'connected_gene': 'DBNL', 'score': 2.87}, {'connected_gene': 'POLM', 'score': 1.42}, {'connected_gene': 'GC07M043624', 'score': 0.77}]
chr7	GH07I043749	43749854	43751400	1.34	[{'connected_gene': 'STK17A', 'score': 14.63}, {'connected_gene': 'COA1', 'score': 12.5}, {'connected_gene': 'BLVRA', 'score': 10.41}, {'connected_gene': 'DBNL', 'score': 1.17}, {'connected_gene': 'PIR57316', 'score': 0.37}]
chr7	GH07I043635	43635185	43638637	1.28	[{'connected_gene': 'COA1', 'score': 22.54}, {'connected_gene': 'STK17A', 'score': 16.15}, {'connected_gene': 'BLVRA', 'score': 9.85}, {'connected_gene': 'POLM', 'score': 2.92}, {'connected_gene': 'DBNL', 'score': 2.32}, {'connected_gene': 'URGCP', 'score': 1.27}, {'connected_gene': 'GC07M043624', 'score': 0.44}]
chr7	GH07I043567	43567439	43574000	1.62	[{'connected_gene': 'COA1', 'score': 21.57}, {'connected_gene': 'LUARIS', 'score': 11.5}, {'connected_gene': 'BLVRA', 'score': 10.34}, {'connected_gene': 'STK17A', 'score': 7.73}, {'connected_gene': 'DBNL', 'score': 2.8}]
chr7	GH07I043925	43925628	43927866	2.05	[{'connected_gene': 'URGCP', 'score': 550.77}, {'connected_gene': 'UBE2D4', 'score': 550.77}, {'connected_gene': 'POLM', 'score': 10.91}, {'connected_gene': 'RASA4CP', 'score': 6.33}, {'connected_gene': 'DBNL', 'score': 5.03}, {'connected_gene': 'PIR62464', 'score': 0.31}]
chr7	GH07I043876	43876014	43877378	0.51	[{'connected_gene': 'URGCP', 'score': 31.78}, {'connected_gene': 'POLM', 'score': 17.75}, {'connected_gene': 'ENSG00000239556', 'score': 14.46}, {'connected_gene': 'UBE2D4', 'score': 11.45}, {'connected_gene': 'COA1', 'score': 9.97}, {'connected_gene': 'RASA4CP', 'score': 8.99}, {'connected_gene': 'ENSG00000241057', 'score': 4.99}, {'connected_gene': 'DBNL', 'score': 4.85}, {'connected_gene': 'MRPS24', 'score': 0.44}, {'connected_gene': 'URGCP-MRPS24', 'score': 0.31}]
chr7	GH07I043903	43903784	43907341	2.17	[{'connected_gene': 'URGCP', 'score': 567.19}, {'connected_gene': 'URGCP-MRPS24', 'score': 550.77}, {'connected_gene': 'ENSG00000239556', 'score': 20.74}, {'connected_gene': 'POLM', 'score': 10.11}, {'connected_gene': 'RASA4CP', 'score': 9.89}, {'connected_gene': 'DBNL', 'score': 5.43}, {'connected_gene': 'MRPS24', 'score': 0.28}]
chr7	GH07I043605	43605274	43605424	0.64	[{'connected_gene': 'DDX56', 'score': 10.51}, {'connected_gene': 'DBNL', 'score': 2.44}, {'connected_gene': 'STK17A', 'score': 2.32}, {'connected_gene': 'POLM', 'score': 1.4}, {'connected_gene': 'PIR39554', 'score': 0.77}]
chr7	GH07I044063	44063503	44064607	0.63	[{'connected_gene': 'PGAM2', 'score': 550.77}, {'connected_gene': 'ENSG00000239775', 'score': 550.77}, {'connected_gene': 'RASA4CP', 'score': 31.45}, {'connected_gene': 'POLM', 'score': 14.92}, {'connected_gene': 'AEBP1', 'score': 11.19}, {'connected_gene': 'PIR32362', 'score': 0.77}, {'connected_gene': 'DBNL', 'score': 0.37}]
chr7	GH07I044064	44064862	44066423	1.16	[{'connected_gene': 'PGAM2', 'score': 550.77}, {'connected_gene': 'ENSG00000239775', 'score': 550.77}, {'connected_gene': 'POLM', 'score': 13.3}, {'connected_gene': 'LINC00957', 'score': 6.93}, {'connected_gene': 'DBNL', 'score': 4.76}]
chr7	GH07I044049	44049506	44049846	0.2	[{'connected_gene': 'RASA4CP', 'score': 8.93}, {'connected_gene': 'MIR6837', 'score': 0.77}, {'connected_gene': 'DBNL', 'score': 0.44}]
chr7	GH07I044043	44043706	44047823	2.54	[{'connected_gene': 'DBNL', 'score': 557.4}, {'connected_gene': 'POLM', 'score': 32.12}, {'connected_gene': 'RASA4CP', 'score': 31.14}, {'connected_gene': 'ENSG00000241057', 'score': 21.88}, {'connected_gene': 'ENSG00000239556', 'score': 20.87}, {'connected_gene': 'STK17A', 'score': 3.89}, {'connected_gene': 'MIR6837', 'score': 0.44}, {'connected_gene': 'LINC00957', 'score': 0.44}]
chr7	GH07I044094	44094542	44096171	0.77	[{'connected_gene': 'POLM', 'score': 8.94}, {'connected_gene': 'GCK', 'score': 5.37}, {'connected_gene': 'DBNL', 'score': 5.15}, {'connected_gene': 'AEBP1', 'score': 4.72}]
chr7	GH07I043890	43890452	43891867	0.58	[{'connected_gene': 'POLM', 'score': 10.06}, {'connected_gene': 'DBNL', 'score': 5.82}, {'connected_gene': 'URGCP-MRPS24', 'score': 0.37}, {'connected_gene': 'MRPS24', 'score': 0.34}, {'connected_gene': 'URGCP', 'score': 0.28}]
chr7	GH07I044058	44058212	44059911	0.83	[{'connected_gene': 'POLM', 'score': 23.38}, {'connected_gene': 'PIR32362', 'score': 0.77}, {'connected_gene': 'MIR6837', 'score': 0.44}, {'connected_gene': 'DBNL', 'score': 0.39}]
chr7	GH07I043619	43619216	43627941	1.2	[{'connected_gene': 'PIR42681', 'score': 550.77}, {'connected_gene': 'STK17A', 'score': 18.34}, {'connected_gene': 'COA1', 'score': 15.92}, {'connected_gene': 'MRPL32', 'score': 11.34}, {'connected_gene': 'DDX56', 'score': 11.04}, {'connected_gene': 'BLVRA', 'score': 9.55}, {'connected_gene': 'POLM', 'score': 6.59}, {'connected_gene': 'DBNL', 'score': 2.49}, {'connected_gene': 'GC07P043619', 'score': 0.77}, {'connected_gene': 'GC07M043624', 'score': 0.77}, {'connected_gene': 'PIR50622', 'score': 0.77}]
chr7	GH07I044065	44063102	44063159	0.57	[{'connected_gene': 'PIR32362', 'score': 550.77}, {'connected_gene': 'ENSG00000239775', 'score': 550.77}, {'connected_gene': 'AEBP1', 'score': 11.19}, {'connected_gene': 'PGAM2', 'score': 0.77}, {'connected_gene': 'DBNL', 'score': 0.37}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000448521	[[44084238, 44084419], [44089823, 44089879], [44091428, 44091541], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098030, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100932]]	[[44084336, 44084419], [44089823, 44089879], [44091428, 44091541], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098030, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100515]]
ENST00000456905	[[44084271, 44084419], [44089823, 44089879], [44091428, 44091541], [44092465, 44092540], [44097380, 44097458], [44097727, 44097879], [44098027, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100542]]	[[44084336, 44084419], [44089823, 44089879], [44091428, 44091541], [44092465, 44092540], [44097380, 44097458], [44097727, 44097879], [44098027, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100515]]
ENST00000458579	[[44084273, 44084419], [44091428, 44091541], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097571, 44097674]]	[[44084336, 44084419], [44091428, 44091429]]
ENST00000439983	[[44084274, 44084419], [44089823, 44090293]]	None
ENST00000440166	[[44084274, 44084419], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098030, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100744]]	[[44092522, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098030, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100515]]
ENST00000441840	[[44084284, 44084419], [44089823, 44089863], [44096338, 44096502], [44097380, 44097458], [44097727, 44097879], [44098027, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44101208]]	[[44084336, 44084419], [44089823, 44089863], [44096338, 44096368]]
ENST00000464762	[[44084300, 44084419], [44089823, 44089879], [44091428, 44091541], [44092465, 44092550], [44096355, 44096502], [44097380, 44097458], [44097727, 44097822]]	[[44084336, 44084419], [44089823, 44089879], [44091428, 44091541], [44092465, 44092550], [44096355, 44096405]]
ENST00000439815	[[44084300, 44084419], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098027, 44098092]]	[[44084336, 44084419], [44096355, 44096368]]
ENST00000498733	[[44084300, 44084465], [44089823, 44089879], [44091428, 44091541], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098027, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100538]]	[[44084336, 44084465], [44089823, 44089841]]
ENST00000452943	[[44084300, 44084419], [44089823, 44089879], [44091428, 44091541], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098027, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100771]]	[[44084336, 44084419], [44089823, 44089879], [44091428, 44091541], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098027, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100515]]
ENST00000485932	[[44084304, 44084441], [44089823, 44089879], [44096355, 44096502], [44097380, 44097458], [44097727, 44097862]]	[[44084336, 44084441], [44089823, 44089841]]
ENST00000429716	[[44084306, 44084419], [44089823, 44089879], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098030, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100927]]	[[44084336, 44084419], [44089823, 44089879], [44092465, 44092540], [44096355, 44096405]]
ENST00000468694	[[44084309, 44084419], [44089823, 44089879], [44091428, 44091541], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098027, 44098079], [44098476, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44101236]]	[[44084336, 44084419], [44089823, 44089879], [44091428, 44091541], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098027, 44098079], [44098476, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100515]]
ENST00000441904	[[44084315, 44084465], [44089823, 44089879], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098030, 44098079], [44098500, 44098582], [44098952, 44099041]]	[[44084336, 44084465], [44089823, 44089841]]
ENST00000494774	[[44084315, 44084419], [44089823, 44089879], [44091428, 44091541], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098027, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44101315]]	[[44084336, 44084419], [44089823, 44089879], [44091428, 44091541], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098027, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100515]]
ENST00000411855	[[44084318, 44084419], [44089823, 44089879], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098027, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100836]]	[[44084336, 44084419], [44089823, 44089879], [44096355, 44096405]]
ENST00000490734	[[44084318, 44084419], [44089823, 44089879], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098027, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100836]]	[[44089837, 44089879], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098027, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100515]]
ENST00000423561	[[44084328, 44084419], [44089823, 44089879], [44091428, 44091541], [44092465, 44092540], [44096355, 44096502], [44097380, 44097532]]	None
ENST00000497184	[[44089482, 44091541], [44092465, 44092540], [44096355, 44096502], [44097380, 44097879], [44098030, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44101236]]	None
ENST00000432854	[[44089842, 44089879], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098030, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44109055]]	[[44089842, 44089879], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098030, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100515]]
ENST00000449997	[[44096391, 44096502], [44097380, 44097458], [44097571, 44097591], [44097727, 44097879], [44098030, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44101313]]	None
ENST00000452661	[[44098528, 44098582], [44099141, 44099257], [44099646, 44099752], [44100375, 44100996]]	[[44098528, 44098582], [44099141, 44099257], [44099646, 44099752], [44100375, 44100515]]
NM_001284313	[[44084238, 44084419], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098030, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44101315]]	[[44092522, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098030, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100515]]
NM_001284315	[[44084238, 44084419], [44089823, 44089879], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098027, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44101315]]	[[44089837, 44089879], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098027, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100515]]
NM_001014436	[[44084238, 44084419], [44089823, 44089879], [44091428, 44091541], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098030, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44101315]]	[[44084336, 44084419], [44089823, 44089879], [44091428, 44091541], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098030, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100515]]
NM_014063	[[44084238, 44084419], [44089823, 44089879], [44091428, 44091541], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098027, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44101315]]	[[44084336, 44084419], [44089823, 44089879], [44091428, 44091541], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098027, 44098079], [44098500, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100515]]
NM_001122956	[[44084238, 44084419], [44089823, 44089879], [44091428, 44091541], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098027, 44098079], [44098476, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44101315]]	[[44084336, 44084419], [44089823, 44089879], [44091428, 44091541], [44092465, 44092540], [44096355, 44096502], [44097380, 44097458], [44097727, 44097879], [44098027, 44098079], [44098476, 44098582], [44098952, 44099048], [44099141, 44099257], [44099646, 44099752], [44100375, 44100515]]