PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000260102	[[55047769, 55047951], [55049070, 55049225], [55049827, 55049993], [55055222, 55055346], [55059941, 55060461]]	[[55047843, 55047951], [55049070, 55049225], [55049827, 55049993], [55055222, 55055346], [55059941, 55060279]]
ENST00000519831	[[55047836, 55047951], [55049070, 55049225], [55049827, 55049993], [55055222, 55055387]]	[[55047843, 55047951], [55049070, 55049225], [55049827, 55049993], [55055222, 55055387]]
ENST00000522521	[[55049067, 55049098], [55049170, 55049225], [55049827, 55049993], [55055222, 55055346], [55059941, 55060418]]	[[55059997, 55060279]]
NM_014175	[[55047780, 55047951], [55049070, 55049225], [55049827, 55049993], [55055222, 55055346], [55059941, 55061074]]	[[55047843, 55047951], [55049070, 55049225], [55049827, 55049993], [55055222, 55055346], [55059941, 55060279]]

Promoter

Chrom	Start	End	Description
chr8	55047763	55047845	CAGE_peak_1_at_MRPL15_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I054143	54143065	54144516	0.2	[{'connected_gene': 'RGS20', 'score': 10.01}, {'connected_gene': 'ATP6V1H', 'score': 9.96}, {'connected_gene': 'TCEA1', 'score': 6.28}, {'connected_gene': 'ENSG00000253369', 'score': 4.19}, {'connected_gene': 'MRPL15', 'score': 0.44}, {'connected_gene': 'RNU6ATAC32P', 'score': 0.44}]
chr8	GH08I054011	54011321	54011470	0.49	[{'connected_gene': 'ATP6V1H', 'score': 11.25}, {'connected_gene': 'RGS20', 'score': 10.8}, {'connected_gene': 'MRPL15', 'score': 10.77}, {'connected_gene': 'RNU6-1331P', 'score': 10.54}, {'connected_gene': 'GC08M054012', 'score': 0.77}, {'connected_gene': 'TCEA1', 'score': 0.39}, {'connected_gene': 'GC08P053986', 'score': 0.31}]
chr8	GH08I054160	54159962	54160209	0.27	[{'connected_gene': 'ATP6V1H', 'score': 20.28}, {'connected_gene': 'MRPL15', 'score': 11.9}, {'connected_gene': 'RNU6ATAC32P', 'score': 0.44}, {'connected_gene': 'GC08M054193', 'score': 0.29}]
chr8	GH08I054141	54141110	54141428	0.24	[{'connected_gene': 'ATP6V1H', 'score': 10.32}, {'connected_gene': 'MRPL15', 'score': 0.44}, {'connected_gene': 'RNU6ATAC32P', 'score': 0.39}]
chr8	GH08I054159	54159121	54159270	0.71	[{'connected_gene': 'ATP6V1H', 'score': 25.09}, {'connected_gene': 'MRPL15', 'score': 11.9}, {'connected_gene': 'RNU6ATAC32P', 'score': 0.44}, {'connected_gene': 'GC08M054193', 'score': 0.29}]
chr8	GH08I054134	54134160	54137380	2.03	[{'connected_gene': 'MRPL15', 'score': 550.77}, {'connected_gene': 'TCEA1', 'score': 7.02}, {'connected_gene': 'RNU6ATAC32P', 'score': 0.37}]
chr8	GH08I054098	54098201	54098350	0.43	[{'connected_gene': 'MRPL15', 'score': 11.8}, {'connected_gene': 'TCEA1', 'score': 7.03}, {'connected_gene': 'LYPLA1', 'score': 0.77}, {'connected_gene': 'TDGF1P5', 'score': 0.31}]
chr8	GH08I054165	54165441	54166400	1.23	[{'connected_gene': 'MRPL15', 'score': 11.5}, {'connected_gene': 'SOX17', 'score': 10.83}, {'connected_gene': 'ATP6V1H', 'score': 10.14}, {'connected_gene': 'TCEA1', 'score': 4.23}, {'connected_gene': 'RNU6ATAC32P', 'score': 0.39}, {'connected_gene': 'GC08M054193', 'score': 0.31}]
chr8	GH08I054169	54169201	54170800	1.09	[{'connected_gene': 'MRPL15', 'score': 11.52}, {'connected_gene': 'SOX17', 'score': 11.27}, {'connected_gene': 'ATP6V1H', 'score': 10.14}, {'connected_gene': 'CHCHD2P10', 'score': 4.95}, {'connected_gene': 'RNU6ATAC32P', 'score': 0.37}, {'connected_gene': 'GC08M054193', 'score': 0.34}]
chr8	GH08I054171	54171361	54172527	0.79	[{'connected_gene': 'MRPL15', 'score': 11.5}, {'connected_gene': 'CHCHD2P10', 'score': 4.66}, {'connected_gene': 'RNU6ATAC32P', 'score': 0.37}, {'connected_gene': 'GC08M054193', 'score': 0.34}]
chr8	GH08I054177	54177891	54180996	0.31	[{'connected_gene': 'MRPL15', 'score': 10.88}, {'connected_gene': 'RP1', 'score': 10.13}, {'connected_gene': 'ATP6V1H', 'score': 9.74}, {'connected_gene': 'GC08M054193', 'score': 0.39}, {'connected_gene': 'RNU6ATAC32P', 'score': 0.31}]
chr8	GH08I054139	54139084	54140270	0.49	[{'connected_gene': 'MRPL15', 'score': 0.77}, {'connected_gene': 'RNU6ATAC32P', 'score': 0.39}]
chr8	GH08I054149	54149990	54155080	1.72	[{'connected_gene': 'RNU6ATAC32P', 'score': 550.77}, {'connected_gene': 'LOC100131254', 'score': 17.93}, {'connected_gene': 'ATP6V1H', 'score': 15.87}, {'connected_gene': 'TCEA1', 'score': 6.75}, {'connected_gene': 'MRPL15', 'score': 0.37}]
chr8	GH08I054100	54100069	54102795	1.95	[{'connected_gene': 'LYPLA1', 'score': 550.77}, {'connected_gene': 'TCEA1', 'score': 18.67}, {'connected_gene': 'MRPL15', 'score': 11.82}, {'connected_gene': 'TDGF1P5', 'score': 0.31}]
chr8	GH08I054211	54211563	54213190	0.96	[{'connected_gene': 'LOC100131254', 'score': 17.91}, {'connected_gene': 'MRPL15', 'score': 11.72}, {'connected_gene': 'ATP6V1H', 'score': 8.81}, {'connected_gene': 'GC08P054198', 'score': 0.39}, {'connected_gene': 'ENSG00000253840', 'score': 0.28}]
chr8	GH08I053972	53972417	53973119	0.52	[{'connected_gene': 'LOC100131254', 'score': 550.77}, {'connected_gene': 'RNU6-1331P', 'score': 11.31}, {'connected_gene': 'ATP6V1H', 'score': 10.55}, {'connected_gene': 'MRPL15', 'score': 10.28}, {'connected_gene': 'GC08P053986', 'score': 0.39}, {'connected_gene': 'TCEA1', 'score': 0.25}]
chr8	GH08I054105	54105690	54107346	1.03	[{'connected_gene': 'PIR33175', 'score': 550.77}, {'connected_gene': 'MRPL15', 'score': 13.16}, {'connected_gene': 'TCEA1', 'score': 11.02}, {'connected_gene': 'RGS20', 'score': 10.02}, {'connected_gene': 'ATP6V1H', 'score': 1.4}, {'connected_gene': 'LYPLA1', 'score': 0.77}]