PsyMuKB

PPI network (data source: BioGrid)

A gene is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the mean normalized expression(base 2 log of (TPM+1)) +1 in all brain tissue from GTEx v7 or BrainSpan data.

A protein is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the normalized expression (base 10 log of iBAQ intensity) ≥0.5 in at least one brain tissue from ProteomicsDB data. Otherwise, a gene or protein is determined as either with below-cutoff expressions or no available data.

	The queried gene/protein
	The interacting partner is expressed at mRNA-level
	The interacting partner is expressed at protein-level
	The interacting partner is expressed at both mRNA and protein level
	The interacting partner is with either below-cutoff expressions or no expression data at both mRNA and protein level
	The interacting partner is hit by coding DNMs
	Physical interaction between queried gene/protein and its partner
	Physical interaction between two interacting partners

Symbol A	GeneA coding DNM count	Symbol B	GeneB coding DNM count	Interaction detection method	Publication	Evidence
BARD1	4	TP53	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique	Dong Y (2003), Dong Y (2003), Feki A (2005), Jiang J (2011), Tembe V (2015), Tembe V (2015), Tembe V (2015)	7
EP300	36	HNRNPUL1	1	two hybrid	Wang J (2011)	1
BRCA1	7	SMARCC2	9	biochemical, affinity chromatography technology	Bochar DA (2000), Ertych N (2016)	2
EP300	36	BRCA1	7	affinity chromatography technology, pull down, affinity chromatography technology, pull down, genetic interference, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Pao GM (2000), Pao GM (2000), Pao GM (2000), Pao GM (2000), Fan S (2002), Fan S (2002), Ma Y (2010), Subbaramaiah K (2011), Subbaramaiah K (2012)	9
PAFAH1B3	1	TP53	0	two hybrid	Stelzl U (2005)	1
BARD1	4	LRIF1	3	two hybrid	Goehler H (2004)	1
BCL7C	0	PBRM1	5	affinity chromatography technology	Huttlin EL (2017)	1
CDC5L	2	SMARCA4	19	affinity chromatography technology	Lleres D (2010)	1
CHD7	22	PBRM1	5	affinity chromatography technology, affinity chromatography technology	Bajpai R (2010), Bajpai R (2010)	2
RBFOX2	5	BRD7	2	two hybrid	Ravasi T (2010)	1
BRD7	2	HNRNPUL1	1	pull down, pull down, affinity chromatography technology	Kzhyshkowska J (2003), Kzhyshkowska J (2003), Kzhyshkowska J (2003)	3
LRIF1	3	HAP1	1	two hybrid, two hybrid	Goehler H (2004), Goehler H (2004)	2
RPLP1	0	LRIF1	3	two hybrid	Stelzl U (2005)	1
BCL7A	3	PBRM1	5	affinity chromatography technology	Huttlin EL (2017)	1
GTF3C3	2	GTF3C5	4	biochemical, biochemical, affinity chromatography technology	Havugimana PC (2012), Wan C (2015), Huttlin EL (2017)	3
HIST1H3E	0	SMARCD1	5	affinity chromatography technology	Campos EI (2015)	1
DPF3	2	SMARCC1	5	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Ishizaka A (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	4
BCL7C	0	SMARCC2	9	biochemical, affinity chromatography technology	Wan C (2015), Huttlin EL (2017)	2
SMARCA4	19	SMARCC1	5	biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical	Sif S (2001), Wang W (1996), Otsuki T (2001), Zhao K (1998), Kaeser MD (2008), Kaeser MD (2008), Kaeser MD (2008), Kaeser MD (2008), Inayoshi Y (2006), Inayoshi Y (2006), Pal S (2003), Pal S (2003), Bultman SJ (2005), Nagl NG (2005), Mahajan MC (2005), Trotter KW (2008), Dallas PB (1998), Tando T (2010), Tando T (2010), Bartlett C (2011), Bartlett C (2011), Oh J (2008), Oh J (2008), Havugimana PC (2012), Wan C (2015)	25
SMARCC1	5	PBRM1	5	affinity chromatography technology, affinity chromatography technology	Ryme J (2009), Yan Z (2005)	2
SMARCD1	5	BRD7	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Mak AB (2010), Huttlin EL (2015), Huttlin EL (2017)	3
CHD7	22	SMARCE1	1	affinity chromatography technology, affinity chromatography technology	Bajpai R (2010), Engelen E (2011)	2
HIST1H3E	0	PBRM1	5	affinity chromatography technology	Campos EI (2015)	1
BHLHE40	5	TP53	0	affinity chromatography technology	Thin TH (2007)	1
LAMA4	8	TP53	0	two hybrid, imaging technique	Stelzl U (2005), Chen TC (2014)	2
LAMA4	8	BRD7	2	two hybrid	Stelzl U (2005)	1
NUP50	0	PBRM1	5	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
TP53	0	SMARCC1	5	biochemical, affinity chromatography technology	Lee D (2002), Oh J (2008)	2
PBRM1	5	SMARCD1	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yan Z (2005), Mak AB (2010), Huttlin EL (2015), Huttlin EL (2017)	4
SMARCC2	9	BRD7	2	affinity chromatography technology, affinity chromatography technology	Mak AB (2010), Huttlin EL (2017)	2
DPF3	2	PBRM1	5	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
BCL7A	3	SMARCC2	9	biochemical, affinity chromatography technology	Wan C (2015), Huttlin EL (2017)	2
SMARCE1	1	SMARCD1	5	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Kaeser MD (2008), Chen J (2005), Mak AB (2010), Mak AB (2010), Havugimana PC (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	8
GTF3C3	2	BRD7	2	biochemical	Wan C (2015)	1
SMARCA4	19	HIST2H3C	0	unspecified method	Shen W (2007)	1
CDC5L	2	PSMD11	0	affinity chromatography technology	Lleres D (2010)	1
ARID2	5	SMARCC1	5	affinity chromatography technology	Yan Z (2005)	1
EP300	36	HIST2H3C	0	enzymatic study	Cereseto A (2005)	1
BCL7C	0	ARID2	5	affinity chromatography technology, affinity chromatography technology	Kaeser MD (2008), Huttlin EL (2017)	2
BRD7	2	PBRM1	5	biochemical	Wan C (2015)	1
BARD1	4	HAP1	1	pull down, two hybrid	Goehler H (2004), Goehler H (2004)	2
BRD7	2	LRIF1	3	two hybrid	Goehler H (2004)	1
BCL7C	0	SMARCD1	5	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Kaeser MD (2008), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	4
BRCA1	7	PSMD11	0	affinity chromatography technology	Ertych N (2016)	1
BRCA1	7	RPLP1	0	affinity chromatography technology	Ertych N (2016)	1
BCL7A	3	BRD7	2	affinity chromatography technology	Huttlin EL (2017)	1
BCL7A	3	SMARCE1	1	affinity chromatography technology	Huttlin EL (2017)	1
PBRM1	5	ARID2	5	affinity chromatography technology, affinity chromatography technology, biochemical	Yan Z (2005), Yan Z (2005), Wan C (2015)	3
SMARCC2	9	SMARCC1	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology	Ryme J (2009), Ryme J (2009), Kaeser MD (2008), Kaeser MD (2008), Nagl NG (2005), Mak AB (2010), Havugimana PC (2012), Wan C (2015), Dallas PB (1998), Huttlin EL (2017)	10
IRF2	7	BRD7	2	two hybrid, pull down	Staal A (2000), Staal A (2000)	2
SMARCD1	5	SMARCC2	9	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Hsiao PW (2003), Mak AB (2010), Mak AB (2010), Havugimana PC (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	7
BHLHE40	5	BRD7	2	two hybrid	Stelzl U (2005)	1
CHD7	22	SMARCA4	19	affinity chromatography technology, affinity chromatography technology	Bajpai R (2010), Engelen E (2011)	2
ARID2	5	SMARCA4	19	affinity chromatography technology, affinity chromatography technology	Yan Z (2005), Yan Z (2005)	2
BRCA1	7	POU2F1	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique	Fan W (2002), Hosey AM (2007), Hosey AM (2007), Harte MT (2010)	4
TFAP4	3	BRD7	2	affinity chromatography technology	Ku WC (2009)	1
SMARCD1	5	SMARCC1	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Hsiao PW (2003), Mak AB (2010), Oh J (2008), Havugimana PC (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	7
PBRM1	5	GTF3C5	4	biochemical, biochemical	Havugimana PC (2012), Wan C (2015)	2
PSMD11	0	LRIF1	3	two hybrid	Stelzl U (2005)	1
PCBD1	0	BRD7	2	two hybrid	Ravasi T (2010)	1
DLST	3	BRD7	2	affinity chromatography technology	Malty RH (2017)	1
TFAP4	3	SMARCC2	9	affinity chromatography technology	Ku WC (2009)	1
BRCA1	7	SMARCC1	5	biochemical, affinity chromatography technology	Bochar DA (2000), Ertych N (2016)	2
NEFL	1	BRD7	2	two hybrid	Goehler H (2004)	1
SMARCE1	1	BCL7C	0	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Kaeser MD (2008), Kaeser MD (2008), Wan C (2015), Huttlin EL (2017)	4
DPF3	2	ARID2	5	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SERPINB9	0	LRIF1	3	two hybrid	Stelzl U (2005)	1
DPF3	2	BCL7A	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
DPF3	2	SMARCE1	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
FTH1	0	BRD7	2	two hybrid	Stelzl U (2005)	1
NUP50	0	BRD7	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
BARD1	4	BRD7	2	two hybrid	Goehler H (2004)	1
GTF3C3	2	SMARCC2	9	biochemical	Wan C (2015)	1
TRIM24	1	TP53	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Allton K (2009), Allton K (2009), Jain AK (2012), Jain AK (2014)	4
DPF3	2	SMARCC2	9	affinity chromatography technology, biochemical, affinity chromatography technology	Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	3
LAMA4	8	LRIF1	3	two hybrid	Stelzl U (2005)	1
SMARCC2	9	PBRM1	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ryme J (2009), Yan Z (2005), Mak AB (2010), Huttlin EL (2017)	4
TP53	0	EP300	36	pull down, genetic interference, pull down, enzymatic study, pull down, pull down, affinity chromatography technology, biochemical, enzymatic study, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, x-ray crystallography, pull down, imaging technique, affinity chromatography technology, enzymatic study, affinity chromatography technology, x-ray crystallography, enzymatic study, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, unspecified method, affinity chromatography technology, enzymatic study, unspecified method, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, pull down, enzymatic study, enzymatic study, x-ray crystallography, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, unspecified method	An W (2004), Pastorcic M (2000), Livengood JA (2002), Livengood JA (2002), Grossman SR (1998), Grossman SR (1998), Grossman SR (1998), Grossman SR (1998), Tang Y (2008), Wang H (2008), Valbuena A (2008), Shi D (2009), Vega FM (2004), Finlan L (2004), Groenroos E (2004), Zhao Y (2006), Roe JS (2006), Pedeux R (2005), Sekaric P (2007), Pan X (2009), Tang Y (2006), Sen GS (2011), Li Y (2012), Li Y (2012), Gillotin S (2010), Grossman SR (2003), Issaeva N (2004), Kitagawa M (2008), Sabbatini P (2002), Burge S (2009), Zilfou JT (2001), Issaeva N (2004), Issaeva N (2004), Feng H (2009), Feng H (2009), Lill NL (1997), Dornan D (2004), Dornan D (2004), Di Agostino S (2006), Wells M (2008), Fath DM (2006), Kobet E (2000), Costanzo A (2002), Kumazawa T (2011), Borger DR (2006), Cui D (2013), Borger DR (2006), Lee SJ (2013), Tang HY (2006), Lin C (2011), Choi WI (2014), Ding G (2013), Kim MK (2013), Ali A (2013), Wu G (2014), Mizuguchi Y (2012), Sinha S (2012), Sinha S (2012), Her YR (2013), Her YR (2013), Wu SY (2009), Wu SY (2009), Liu L (1999), Sakaguchi K (1998), Harrod R (2003), Gu W (1997), Teufel DP (2007), Mantovani F (2007), Mantovani F (2007), Dornan D (2003), Dornan D (2003), Dornan D (2003), Dornan D (2003), Dornan D (2003), MacPartlin M (2005), Mujtaba S (2004), Wang YH (2003), Chen H (1999), Tang Z (2013), Graczyk A (2013), Graczyk A (2013), Chan HM (2001), Thomas MC (2005), Miller Jenkins LM (2015), Miller Jenkins LM (2015), Koh DI (2014), Koh DI (2014), Koh DI (2014), Li H (2015), Chen LF (2005), Shi D (2016), Wright DG (2016), Zhang X (2016), Procopio MG (2015), Tong Q (2015)	95
RPLP1	0	BRD7	2	two hybrid	Stelzl U (2005)	1
TFAP4	3	BRCA1	7	affinity chromatography technology	Ku WC (2009)	1
SMARCD1	5	BCL7A	3	affinity chromatography technology, biochemical, affinity chromatography technology	Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	3
HIST1H3E	0	BRD7	2	affinity chromatography technology	Campos EI (2015)	1
BRD7	2	TRIM24	1	affinity chromatography technology, two hybrid	Kikuchi M (2009), Kikuchi M (2009)	2
BRD7	2	TP53	0	affinity chromatography technology, pull down, imaging technique	Drost J (2010), Drost J (2010), Drost J (2010)	3
CDC5L	2	BRD7	2	affinity chromatography technology	Lleres D (2010)	1
DPF3	2	SMARCA4	19	affinity chromatography technology, pull down, affinity chromatography technology, biochemical, affinity chromatography technology	Ishizaka A (2012), Ishizaka A (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	5
IRF2	7	EP300	36	affinity chromatography technology, enzymatic study, pull down	Masumi A (2001), Masumi A (2001), Masumi A (2001)	3
PCBD1	0	SMARCD1	5	two hybrid	Ravasi T (2010)	1
HIST1H3E	0	ARID2	5	affinity chromatography technology	Campos EI (2015)	1
BRD7	2	SMARCC1	5	affinity chromatography technology	Kaeser MD (2008)	1
TFAP4	3	TP53	0	affinity chromatography technology	Ku WC (2009)	1
HIST1H3E	0	SMARCA4	19	affinity chromatography technology	Campos EI (2015)	1
BTBD2	4	BRD7	2	two hybrid	Stelzl U (2005)	1
BRCA1	7	HIST2H3C	0	imaging technique	Ganesan S (2002)	1
TFAP4	3	ARID2	5	affinity chromatography technology	Ku WC (2009)	1
BRD2	2	BRD7	2	affinity chromatography technology, affinity chromatography technology	Zhou M (2006), Zhou M (2006)	2
REEP5	1	BRD7	2	affinity chromatography technology	Hein MY (2015)	1
PBRM1	5	SMARCA4	19	affinity chromatography technology	Yan Z (2005)	1
PSMD11	0	BRD7	2	two hybrid	Stelzl U (2005)	1
BCL7A	3	SMARCC1	5	biochemical, affinity chromatography technology	Wan C (2015), Huttlin EL (2017)	2
PAFAH1B3	1	BRD7	2	two hybrid	Stelzl U (2005)	1
PCBD1	0	GTF3C3	2	two hybrid	Ravasi T (2010)	1
BRD7	2	HAP1	1	two hybrid	Goehler H (2004)	1
TP53	0	FTH1	0	affinity chromatography technology	Fogeron ML (2013)	1
SMARCE1	1	BRD7	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kaeser MD (2008), Mak AB (2010), Huttlin EL (2015), Huttlin EL (2017)	4
HIST1H3E	0	SMARCE1	1	affinity chromatography technology	Campos EI (2015)	1
SMARCA4	19	BCL7A	3	affinity chromatography technology, biochemical, affinity chromatography technology	Tando T (2010), Wan C (2015), Huttlin EL (2017)	3
SMARCE1	1	SMARCC2	9	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Zhao K (1998), Hu K (2006), Lai D (2009), Ryme J (2009), Kaeser MD (2008), Kaeser MD (2008), Chen J (2005), Mak AB (2010), Mak AB (2010), Havugimana PC (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	13
BCL7C	0	SMARCA4	19	affinity chromatography technology, biochemical, affinity chromatography technology	Kaeser MD (2008), Wan C (2015), Huttlin EL (2017)	3
TP53	0	SMARCA4	19	pull down, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Lee D (2002), Lee D (2002), Lee D (2002), Napolitano MA (2007), Guan B (2011), Oh J (2008)	6
SERPINB9	0	TP53	0	two hybrid	Stelzl U (2005)	1
ARID2	5	SMARCD1	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yan Z (2005), Mak AB (2010), Huttlin EL (2015), Huttlin EL (2017)	4
DPF3	2	BRD7	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CHD7	22	BRD7	2	affinity chromatography technology	Bajpai R (2010)	1
EP300	36	GTF3C5	4	affinity chromatography technology	Mertens C (2008)	1
PSMD11	0	TP53	0	two hybrid	Stelzl U (2005)	1
HIST1H3E	0	SMARCC2	9	affinity chromatography technology	Campos EI (2015)	1
TRIM24	1	HIST1H3E	0	x-ray crystallography, unspecified method	Tsai WW (2010), Tsai WW (2010)	2
GTF3C5	4	BRD7	2	biochemical	Wan C (2015)	1
HIST1H3E	0	SMARCC1	5	affinity chromatography technology	Campos EI (2015)	1
DLST	3	TP53	0	affinity chromatography technology	Malty RH (2017)	1
POU2F1	5	BRD7	2	imaging technique	Harte MT (2010)	1
BRCA1	7	TP53	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, biochemical, pull down, pull down, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Abramovitch S (2004), Ouchi T (1998), Dong Y (2003), Dong Y (2003), Chai YL (1999), Chai YL (1999), Zhang H (1998), Dong Y (2003), Chen Y (2006), Quaresima B (2006), Zhang H (1998), Zhang H (1998), Mark WY (2005), Jin S (2009), Jiang J (2011), Rasti M (2015), Rasti M (2015)	17
ARID2	5	SMARCC2	9	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yan Z (2005), Mak AB (2010), Huttlin EL (2017)	3
GTF3C3	2	SMARCA4	19	biochemical	Wan C (2015)	1
NUP50	0	SMARCD1	5	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
REEP5	1	SMARCA4	19	affinity chromatography technology	Hein MY (2015)	1
SERPINB9	0	BRD7	2	two hybrid	Stelzl U (2005)	1
BCL7A	3	BCL7C	0	affinity chromatography technology	Huttlin EL (2017)	1
MX1	0	BRD7	2	two hybrid	Brantis-de-Carvalho CE (2015)	1
BRCA1	7	HNRNPUL1	1	affinity chromatography technology	Ertych N (2016)	1
DPF3	2	BCL7C	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
BRCA1	7	TRIM24	1	two hybrid	Wang J (2011)	1
NUP50	0	SMARCC2	9	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SMARCD1	5	SMARCA4	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Hsiao PW (2003), Pal S (2003), Ito T (2008), Tando T (2010), Mak AB (2010), Oh J (2008), Havugimana PC (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	10
DPF3	2	SMARCD1	5	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Ishizaka A (2012), Ishizaka A (2012), Huttlin EL (2015), Huttlin EL (2017)	4
CDC5L	2	BRD2	2	affinity chromatography technology	Lleres D (2010)	1
SMARCE1	1	PBRM1	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ryme J (2009), Yan Z (2005), Huttlin EL (2015), Huttlin EL (2017)	4
SMARCA4	19	SMARCE1	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Wang W (1996), Zhao K (1998), Zhao K (1998), Hu K (2006), Kaeser MD (2008), Kaeser MD (2008), Kaeser MD (2008), Kaeser MD (2008), Pal S (2003), Bultman SJ (2005), Battaglioli E (2002), ONeill DW (2000), Tando T (2010), Mak AB (2010), Havugimana PC (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	18
BARD1	4	HNRNPUL1	1	affinity chromatography technology	Woods NT (2012)	1
AGR2	0	BRD7	2	two hybrid	Stelzl U (2005)	1
BRD7	2	SMARCA4	19	affinity chromatography technology	Kaeser MD (2008)	1
PAFAH1B3	1	LRIF1	3	two hybrid	Stelzl U (2005)	1
BCL7A	3	ARID2	5	affinity chromatography technology	Huttlin EL (2017)	1
CDC5L	2	SMARCC2	9	affinity chromatography technology	Lleres D (2010)	1
PSMD11	0	HAP1	1	two hybrid	Stelzl U (2005)	1
CHD7	22	ARID2	5	affinity chromatography technology	Bajpai R (2010)	1
SMARCE1	1	SMARCC1	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Zhao K (1998), Hu K (2006), Ryme J (2009), Kaeser MD (2008), Kaeser MD (2008), Kaeser MD (2008), Kaeser MD (2008), Chen J (2005), Chen J (2005), Keppler BR (2010), Mak AB (2010), Havugimana PC (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	15
BCL7C	0	BRD7	2	affinity chromatography technology, affinity chromatography technology	Kaeser MD (2008), Huttlin EL (2017)	2
CHD7	22	SMARCC2	9	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bajpai R (2010), Bajpai R (2010), Engelen E (2011)	3
BRD7	2	EP300	36	affinity chromatography technology	Drost J (2010)	1
EP300	36	GTF3C3	2	affinity chromatography technology	Mertens C (2008)	1
TFAP4	3	SMARCE1	1	affinity chromatography technology	Ku WC (2009)	1
BRD7	2	ARID2	5	affinity chromatography technology, biochemical	Kaeser MD (2008), Wan C (2015)	2
SMARCD1	5	TP53	0	affinity chromatography technology	Oh J (2008)	1
CDC5L	2	SMARCD1	5	two hybrid	Wang J (2011)	1
BTBD2	4	TP53	0	two hybrid, affinity chromatography technology	Stelzl U (2005), Stelzl U (2005)	2
BRCA1	7	BARD1	4	two hybrid, two hybrid, pull down, pull down, pull down, pull down, imaging technique, imaging technique, affinity chromatography technology, pull down, biochemical, pull down, biochemical, affinity chromatography technology, biochemical, pull down, affinity chromatography technology, two hybrid, pull down, pull down, fluorescent resonance energy transfe, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, imaging technique, imaging technique, affinity chromatography technology, affinity chromatography technology, biochemical, two hybrid, x-ray crystallography, affinity chromatography technology, biochemical, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, imaging technique, affinity chromatography technology, pull down, enzymatic study, affinity chromatography technology, pull down, imaging technique, affinity chromatography technology, two hybrid, x-ray crystallography, imaging technique, imaging technique, two hybrid, affinity chromatography technology, protein complementation assay, protein complementation assay, pull down, affinity chromatography technology, pull down, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, x-ray crystallography, affinity chromatography technology, affinity chromatography technology	Wu LC (1996), Wang Q (2001), Wang Q (2001), Mallery DL (2002), Wu-Baer F (2003), Hashizume R (2001), Fabbro M (2002), Rodriguez JA (2004), Brzovic PS (2003), Nishikawa H (2004), Dong Y (2003), Dong Y (2003), Chiba N (2001), Kleiman FE (2001), Kleiman FE (2001), Kleiman FE (2001), Wu LC (1996), Morris JR (2002), Brzovic PS (2001), Xia Y (2003), Meza JE (1999), Kentsis A (2002), Hashizume R (2001), Fabbro M (2004), Brzovic PS (2001), Yu X (1998), Jin Y (1997), Scully R (1999), Fabbro M (2004), Kleiman FE (1999), Kleiman FE (1999), Tascou S (2003), Brzovic PS (2003), Benezra M (2003), Meza JE (1999), Cantor SB (2001), Wang Q (1998), Ryser S (2009), Ryser S (2009), Nishikawa H (2009), Nishikawa H (2009), Sobhian B (2007), Harte MT (2010), Simons AM (2006), Wei L (2008), Kumaraswamy E (2007), Kumaraswamy E (2007), Dizin E (2010), Dizin E (2010), Greenberg RA (2006), Greenberg RA (2006), Greenberg RA (2006), Zhu Q (2011), Chen A (2002), Chen A (2002), Sy SM (2009), Sy SM (2009), Nelson AC (2010), Nelson AC (2010), Morris JR (2006), Brzovic PS (2001), Mok MT (2010), Au WW (2005), Ayi TC (1998), Choudhury AD (2005), Sarkar M (2008), Sarkar M (2008), Thakar A (2010), Lu Y (2012), Kentsis A (2002), Christou CM (2014), Christou CM (2014), Sevcik J (2013), Johnson N (2013), Matsuzawa A (2014), Matsuzawa A (2014), Hill SJ (2014), Hill SJ (2014), Hill SJ (2014), Starita LM (2015), Hu Y (2014), Wu W (2015), Loke J (2015), Densham RM (2016), Boukerroucha M (2015), Huttlin EL (2017), Liang Y (2017), Liang Y (2017), Liang Y (2017), Ertych N (2016), Ertych N (2016)	91
HIST2H3C	0	BRD7	2	affinity chromatography technology, affinity chromatography technology, unspecified method	Peng C (2006), Peng C (2006), Peng C (2006)	3
SMARCA4	19	SMARCC2	9	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology	Wang W (1996), Otsuki T (2001), Zhao K (1998), Kaeser MD (2008), Kaeser MD (2008), Pal S (2003), Trotter KW (2008), Tando T (2010), Mak AB (2010), Nishimoto N (2012), Nishimoto N (2012), Havugimana PC (2012), Wan C (2015), Dallas PB (1998), Huttlin EL (2017)	15
CHD7	22	SMARCC1	5	affinity chromatography technology	Bajpai R (2010)	1
BCL7C	0	SMARCC1	5	affinity chromatography technology, biochemical, affinity chromatography technology	Kaeser MD (2008), Wan C (2015), Huttlin EL (2017)	3
TP53	0	GTF3C3	2	affinity chromatography technology	Fogeron ML (2013)	1
BRCA1	7	CDC5L	2	affinity chromatography technology	Ertych N (2016)	1
SMARCE1	1	ARID2	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kaeser MD (2008), Kaeser MD (2008), Yan Z (2005), Yan Z (2005), Mak AB (2010), Huttlin EL (2015), Huttlin EL (2017)	7
BRCA1	7	BRD7	2	two hybrid, affinity chromatography technology, affinity chromatography technology, imaging technique	Harte MT (2010), Harte MT (2010), Harte MT (2010), Harte MT (2010)	4
NUP50	0	ARID2	5	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
BRCA1	7	SMARCA4	19	affinity chromatography technology, pull down, biochemical, pull down, affinity chromatography technology, affinity chromatography technology	Hill DA (2004), Bochar DA (2000), Bochar DA (2000), Bochar DA (2000), Tu Z (2013), Ertych N (2016)	6