PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000263707	[[121974162, 121981963], [121983137, 121983189], [121989401, 121989544], [121991666, 121991770], [121992796, 121992887], [121995198, 121995292], [121995377, 121995426], [121997133, 121997225], [121999934, 122000045], [122004393, 122004546], [122005739, 122005846], [122006557, 122006663], [122007146, 122007223], [122038695, 122038847], [122042623, 122042783]]	[[121981916, 121981963], [121983137, 121983189], [121989401, 121989544], [121991666, 121991770], [121992796, 121992887], [121995198, 121995292], [121995377, 121995426], [121997133, 121997225], [121999934, 122000045], [122004393, 122004546], [122005739, 122005846], [122006557, 122006663], [122007146, 122007223], [122038695, 122038847], [122042623, 122042685]]
ENST00000464621	[[121981739, 121981963], [121983137, 121983189], [121989401, 121989544], [121991666, 121991850]]	None
NM_014553	[[121974162, 121981963], [121983137, 121983189], [121989401, 121989544], [121991666, 121991770], [121992796, 121992887], [121995198, 121995292], [121995377, 121995426], [121997133, 121997225], [121999934, 122000045], [122004393, 122004546], [122005739, 122005846], [122006557, 122006663], [122007146, 122007223], [122038695, 122038847], [122042623, 122042778]]	[[121981916, 121981963], [121983137, 121983189], [121989401, 121989544], [121991666, 121991770], [121992796, 121992887], [121995198, 121995292], [121995377, 121995426], [121997133, 121997225], [121999934, 122000045], [122004393, 122004546], [122005739, 122005846], [122006557, 122006663], [122007146, 122007223], [122038695, 122038847], [122042623, 122042685]]

Promoter

Chrom	Start	End	Description
chr2	122042770	122042785	CAGE_peak_1_at_TFCP2L1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I121196	121196097	121199004	1.06	[{'connected_gene': 'TFCP2L1', 'score': 12.08}, {'connected_gene': 'CLASP1', 'score': 1.6}, {'connected_gene': 'ENSG00000236145', 'score': 0.37}, {'connected_gene': 'PIR40716', 'score': 0.34}]
chr2	GH02I121171	121171925	121175689	0.58	[{'connected_gene': 'TFCP2L1', 'score': 7.63}, {'connected_gene': 'ENSG00000236145', 'score': 0.77}, {'connected_gene': 'LOC105373588', 'score': 0.29}]
chr2	GH02I121287	121287201	121287869	0.2	[{'connected_gene': 'TFCP2L1', 'score': 6.39}, {'connected_gene': 'RPS17P7', 'score': 0.34}]
chr2	GH02I121293	121293224	121294141	0.49	[{'connected_gene': 'TFCP2L1', 'score': 7.1}, {'connected_gene': 'RPS17P7', 'score': 0.37}]
chr2	GH02I121185	121185057	121186649	0.74	[{'connected_gene': 'TFCP2L1', 'score': 8.52}, {'connected_gene': 'ENSG00000236145', 'score': 0.44}, {'connected_gene': 'PIR40716', 'score': 0.29}]
chr2	GH02I121181	121181609	121183326	0.31	[{'connected_gene': 'TFCP2L1', 'score': 8.46}, {'connected_gene': 'ENSG00000236145', 'score': 0.77}, {'connected_gene': 'PIR40716', 'score': 0.28}]
chr2	GH02I121284	121284016	121285654	1.76	[{'connected_gene': 'TFCP2L1', 'score': 556.43}, {'connected_gene': 'GC02P121255', 'score': 0.31}]
chr2	GH02I121309	121309651	121310296	0.56	[{'connected_gene': 'RPS17P7', 'score': 550.77}, {'connected_gene': 'TFCP2L1', 'score': 12.75}]