PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000309180	[[150915618, 150917226], [150918695, 150918784], [150920890, 150920979]]	[[150916213, 150917173]]
ENST00000480322	[[150917119, 150917226], [150920890, 150920988]]	[[150917119, 150917173]]
NM_013308	[[150915618, 150917226], [150918695, 150918784], [150920890, 150920988]]	[[150916213, 150917173]]

Promoter

Chrom	Start	End	Description
chr3	150920950	150920962	CAGE_peak_2_at_GPR171_5end
chr3	150920988	150921009	CAGE_peak_1_at_GPR171_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I151224	151224950	151229481	1.28	[{'connected_gene': 'P2RY14', 'score': 27.02}, {'connected_gene': 'P2RY12', 'score': 4.81}, {'connected_gene': 'GC03M151222', 'score': 0.44}, {'connected_gene': 'GPR171', 'score': 0.34}, {'connected_gene': 'MED12L', 'score': 0.11}]
chr3	GH03I151216	151216793	151216982	0.31	[{'connected_gene': 'P2RY14', 'score': 11.79}, {'connected_gene': 'GPR87', 'score': 10.38}, {'connected_gene': 'MED12L', 'score': 9.19}, {'connected_gene': 'GPR171', 'score': 0.39}, {'connected_gene': 'GC03M151222', 'score': 0.37}]
chr3	GH03I151209	151209325	151211755	1.12	[{'connected_gene': 'P2RY14', 'score': 11.79}, {'connected_gene': 'GPR87', 'score': 10.38}, {'connected_gene': 'MED12L', 'score': 9.2}, {'connected_gene': 'GPR171', 'score': 0.44}, {'connected_gene': 'GC03M151222', 'score': 0.31}]
chr3	GH03I151219	151219213	151219402	0.52	[{'connected_gene': 'P2RY14', 'score': 12.81}, {'connected_gene': 'P2RY13', 'score': 11.44}, {'connected_gene': 'GC03M151222', 'score': 0.37}, {'connected_gene': 'GPR171', 'score': 0.37}, {'connected_gene': 'MED12L', 'score': 0.12}]
chr3	GH03I151182	151182801	151184123	0.7	[{'connected_gene': 'P2RY14', 'score': 11.55}, {'connected_gene': 'MED12L', 'score': 10.37}, {'connected_gene': 'GPR87', 'score': 10.2}, {'connected_gene': 'GPR171', 'score': 6.79}, {'connected_gene': 'AADAC', 'score': 4.51}, {'connected_gene': 'GC03P151189', 'score': 0.77}, {'connected_gene': 'GC03M151148', 'score': 0.31}]
chr3	GH03I151230	151230202	151231457	0.85	[{'connected_gene': 'P2RY14', 'score': 32.1}, {'connected_gene': 'MED12L', 'score': 9.47}, {'connected_gene': 'P2RY13', 'score': 4.36}, {'connected_gene': 'GC03M151222', 'score': 0.44}, {'connected_gene': 'GPR171', 'score': 0.31}]
chr3	GH03I150759	150759014	150766484	2.55	[{'connected_gene': 'SIAH2', 'score': 559.15}, {'connected_gene': 'SIAH2-AS1', 'score': 550.77}, {'connected_gene': 'TSC22D2', 'score': 4.3}, {'connected_gene': 'SERP1', 'score': 1.86}, {'connected_gene': 'GPR171', 'score': 1.54}, {'connected_gene': 'SELENOT', 'score': 1.2}, {'connected_gene': 'LOC105374155', 'score': 0.77}]
chr3	GH03I151199	151199422	151203763	1.5	[{'connected_gene': 'GPR171', 'score': 550.77}, {'connected_gene': 'P2RY14', 'score': 10.83}, {'connected_gene': 'AADAC', 'score': 4.45}, {'connected_gene': 'AADACL2', 'score': 4.34}, {'connected_gene': 'RNA5SP145', 'score': 0.39}, {'connected_gene': 'MED12L', 'score': 0.13}]
chr3	GH03I151203	151203916	151205328	0.4	[{'connected_gene': 'GPR171', 'score': 550.77}, {'connected_gene': 'GC03M151222', 'score': 0.29}, {'connected_gene': 'MED12L', 'score': 0.13}]