PsyMuKB

PPI network (data source: BioGrid)

A gene is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the mean normalized expression(base 2 log of (TPM+1)) +1 in all brain tissue from GTEx v7 or BrainSpan data.

A protein is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the normalized expression (base 10 log of iBAQ intensity) ≥0.5 in at least one brain tissue from ProteomicsDB data. Otherwise, a gene or protein is determined as either with below-cutoff expressions or no available data.

	The queried gene/protein
	The interacting partner is expressed at mRNA-level
	The interacting partner is expressed at protein-level
	The interacting partner is expressed at both mRNA and protein level
	The interacting partner is with either below-cutoff expressions or no expression data at both mRNA and protein level
	The interacting partner is hit by coding DNMs
	Physical interaction between queried gene/protein and its partner
	Physical interaction between two interacting partners

Symbol A	GeneA coding DNM count	Symbol B	GeneB coding DNM count	Interaction detection method	Publication	Evidence
HIST1H3A	3	DDB1	6	affinity chromatography technology, pull down	Higa LA (2006), Higa LA (2006)	2
TP53	0	TP73	2	affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology	Stindt MH (2015), Puca R (2011), De Laurenzi V (1998), Di Como CJ (1999)	4
NR2C1	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011)	2
PPP1CC	2	PCNA	0	affinity chromatography technology	Flores-Delgado G (2007)	1
SP3	4	YY1	7	affinity chromatography technology	Qiao H (2011)	1
SMAD2	5	SMARCA4	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Xi Q (2008), Xi Q (2008), Xi Q (2008), He W (2006)	4
ZMYM2	5	RCOR1	0	affinity chromatography technology, pull down	Gocke CB (2008), Gocke CB (2008)	2
PARP1	3	HIST1H3A	3	enzymatic study	Bonfiglio JJ (2017)	1
E2F4	0	RBL1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Chen CR (2002), Iavarone A (1999), Schmit F (2007), Moberg K (1996), Magae J (1996), Beijersbergen RL (1994), Ginsberg D (1994), Trimarchi JM (1998)	8
PML	7	DAXX	5	two hybrid, two hybrid, affinity chromatography technology, imaging technique, two hybrid, affinity chromatography technology, imaging technique, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, imaging technique, imaging technique, affinity chromatography technology, affinity chromatography technology, pull down, pull down, imaging technique	Ishov AM (1999), Li H (2000), Li H (2000), Li H (2000), Lehembre F (2001), Zhong S (2000), Cuchet-Lourenco D (2011), Chu Y (2011), Meinecke I (2007), Jang MS (2002), Chang CC (2011), Wethkamp N (2011), Ferguson BJ (2007), Delbarre E (2013), Delbarre E (2013), Sahin U (2014), Lin DY (2006), Lin DY (2006), Lin DY (2006), Lin DY (2006), Torii S (1999)	21
MTA3	3	RCOR3	0	affinity chromatography technology	Bantscheff M (2011)	1
CHD4	22	CHD3	19	affinity chromatography technology, affinity chromatography technology, biochemical	Xue Y (1998), Xue Y (1998), Havugimana PC (2012)	3
NCOR2	12	HDAC2	1	biochemical, affinity chromatography technology	Underhill C (2000), Wang L (2006)	2
CDKN1A	1	HDAC1	4	pull down, affinity chromatography technology, pull down, imaging technique	Li Z (2010), Li Z (2010), Garcia-Wilson E (2005), Chen TC (2014)	4
PCNA	0	DNMT1	5	affinity chromatography technology, pull down, pull down, affinity chromatography technology, unspecified method, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Rountree MR (2000), Iida T (2002), Chuang LS (1997), Ha K (2011), Pichler G (2012), Pichler G (2012), Pichler G (2012), Hervouet E (2010), Hervouet E (2010), Cai Y (2014), Han J (2014), Hein MY (2015)	12
UHRF2	1	TP53	0	far western blotting, affinity chromatography technology, affinity chromatography technology, pull down	Mori T (2011), Mori T (2011), Mori T (2011), Mori T (2011)	4
BRMS1	1	SAP30	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Meehan WJ (2004), Meehan WJ (2004), Hein MY (2015)	3
RCOR1	0	HDAC1	4	biochemical, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2002), You A (2001), You A (2001), Gocke CB (2008), Battaglioli E (2002), Gu H (2005), Pflum MK (2001), Humphrey GW (2001), Humphrey GW (2001), Humphrey GW (2001), Cetinkaya C (2007), Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	15
PHB	0	HDAC1	4	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi B (2003), Wang S (2002), Gamble SC (2007), He B (2008)	4
CTNNB1	30	PPARG	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zurlo D (2014), Zurlo D (2014), Jansson EA (2005), Jiang Y (2009)	4
SIN3A	13	SAP30	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, x-ray crystallography, pull down, affinity chromatography technology, affinity chromatography technology	Fleischer TC (2003), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Zhang Y (1999), Yochum GS (2001), Kuzmichev A (2002), Kuzmichev A (2002), Kuzmichev A (2002), Laherty CD (1998), Viiri KM (2006), Viiri KM (2006), Nakamura T (2002), Lai A (2001), Skowyra D (2001), Zhang Y (1998), Zhang Y (1998), Xie T (2011), Xie T (2011), Bantscheff M (2011), Hein MY (2015)	21
AR	3	ARID5B	5	bioid	Lempiaeinen JK (2017)	1
CUL4B	8	TLE1	6	affinity chromatography technology	Higa LA (2006)	1
CSNK2A1	15	MDM2	2	enzymatic study, enzymatic study	Goetz C (1999), Hjerrild M (2001)	2
SMAD7	1	CTNNB1	30	affinity chromatography technology, imaging technique, affinity chromatography technology	Edlund S (2005), Edlund S (2005), Tang Y (2008)	3
NKX3-2	1	RBBP7	1	affinity chromatography technology	Kim DW (2003)	1
EHMT2	4	TP53	0	enzymatic study	Huang J (2010)	1
SP1	0	TAL1	0	pull down, two hybrid, affinity chromatography technology	Lecuyer E (2002), Lecuyer E (2002), Lecuyer E (2002)	3
MORF4L1	1	SIN3A	13	affinity chromatography technology	Doyon Y (2004)	1
RELA	1	HIF1A	1	affinity chromatography technology, affinity chromatography technology	Yang W (2012), Yang W (2012)	2
HIF1A	1	RUNX2	2	affinity chromatography technology, affinity chromatography technology, pull down	Lee SH (2012), Lee SH (2012), Lee SH (2012)	3
MTA1	3	CHD3	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Yan C (2003), Khaleque MA (2008), Xue Y (1998), Wan C (2015)	4
SP1	0	SMARCA4	19	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kadam S (2000), Liu H (2002), Liu H (2002), Ma Z (2004), Saladi SV (2010)	5
MDM2	2	CCND1	1	affinity chromatography technology	Yang P (2016)	1
CREBBP	29	RBBP4	3	two hybrid, affinity chromatography technology, pull down	Zhang Q (2000), Zhang Q (2000), Zhang Q (2000)	3
MTA3	3	HMG20A	0	affinity chromatography technology	Bantscheff M (2011)	1
GATAD1	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Hein MY (2015), Varier RA (2016)	3
BCL3	2	CTBP1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down	Keutgens A (2010), Keutgens A (2010), Choi HJ (2010), Choi HJ (2010), Choi HJ (2010), Choi HJ (2010)	6
RELA	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kiernan R (2003), Zhong H (2002), Zhong H (2002), Zhong H (2002), Zhong H (2002), Ashburner BP (2001), Ashburner BP (2001), OShea JM (2010), OShea JM (2010), Liu Y (2006), Cao W (2006), Hu J (2004), Hu J (2004), Sun JM (2007), Deckmann K (2012)	15
HIST1H2BA	0	MORF4L1	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
ING1	2	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kuzmichev A (2002), Skowyra D (2001), Nikolaev AY (2004)	3
DNMT3B	3	CREB1	1	affinity chromatography technology	Hervouet E (2009)	1
NFKB1	2	EP300	36	affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Deng WG (2003), Deng WG (2003), Furia B (2002), Wang H (2010), Wang H (2010), Sen GS (2011), Hassa PO (2003), Hassa PO (2003), Deng WG (2003)	9
DNMT3B	3	MBD4	1	pull down	Boland MJ (2008)	1
H2AFY	1	MECP2	36	affinity chromatography technology	Sarma K (2014)	1
KDM5B	27	MBD2	1	affinity chromatography technology	Li Q (2011)	1
HIST1H3A	3	H2AFY	1	imaging technique, affinity chromatography technology, affinity chromatography technology	Soldi M (2013), Sarma K (2014), Huttlin EL (2017)	3
SIN3B	5	SIN3A	13	affinity chromatography technology	Hein MY (2015)	1
RELA	1	CEBPD	0	pull down	Xia C (1997)	1
HDAC1	4	PWWP2A	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	3
MYOD1	0	HIST1H3A	3	affinity chromatography technology	Mal AK (2006)	1
EHMT2	4	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Bantscheff M (2011)	2
NR2C1	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011), Cui S (2011)	3
TLE1	6	RELA	1	affinity chromatography technology	Tetsuka T (2000)	1
NR3C1	2	PML	7	two hybrid	Ravasi T (2010)	1
TRIM28	1	DNMT3A	17	affinity chromatography technology	Quenneville S (2011)	1
PPARG	0	CREBBP	29	pull down, two hybrid, unspecified method, pull down, two hybrid, pull down, unspecified method	Li M (2000), Chen Q (2004), Lee G (2002), Carmona MC (2007), Carmona MC (2007), Jeninga EH (2007), Koppen A (2009)	7
SMARCA2	17	SIN3A	13	biochemical, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Sif S (2001), Sif S (2001), Pal S (2003), Pal S (2003), Nakamura T (2002), Nakamura T (2002), Kemper JK (2004), Kemper JK (2004), Wan C (2015)	9
E2F4	0	KMT2A	58	affinity chromatography technology	Takeda S (2006)	1
TAL1	0	EP300	36	affinity chromatography technology, pull down, pull down, enzymatic study, pull down, pull down	Huang S (1999), Huang S (1999), Huang S (1999), Huang S (2000), Huang S (2000), Qiu Y (2002)	6
HDAC1	4	GATAD1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Vermeulen M (2010), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	5
GATAD2B	15	CDK2AP1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	3
CHD4	22	GATAD2A	3	affinity chromatography technology, biochemical, affinity chromatography technology	Rahman S (2011), Havugimana PC (2012), Huttlin EL (2017)	3
TXNIP	2	GATAD2B	15	affinity chromatography technology	Huttlin EL (2017)	1
SNAI2	0	TP53	0	affinity chromatography technology	Kao SH (2014)	1
PHB	0	E2F1	0	pull down, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi B (2003), Joshi B (2003), Fusaro G (2003), Fusaro G (2003), Wang S (2002), Wang S (2002), Wang S (1999), Wang S (1999), Wang S (2004), Wang S (2004)	10
NR3C1	2	CREBBP	29	pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Almloef T (1998), Almloef T (1998), Fryer CJ (1998), Govindan MV (2010), Govindan MV (2010), Govindan MV (2010), Carruthers CW (2015)	7
RELA	1	TP53	0	affinity chromatography technology, affinity chromatography technology, fluorescent resonance energy transfe	Huang WC (2007), Huang WC (2007), Ivanov AA (2017)	3
PCNA	0	UHRF1	3	affinity chromatography technology	Hein MY (2015)	1
KDM1A	2	RBBP7	1	affinity chromatography technology	Li Q (2011)	1
MBD2	1	SIN3A	13	pull down, two hybrid	Boeke J (2000), Boeke J (2000)	2
HIST1H3A	3	MECP2	36	bioid	Lambert JP (2015)	1
CREBBP	29	ZBTB2	1	affinity chromatography technology	Jung SY (2005)	1
E2F4	0	SIN3A	13	affinity chromatography technology	Tyagi S (2007)	1
BRMS1L	1	SIN3A	13	affinity chromatography technology, affinity chromatography technology	Nikolaev AY (2004), Nikolaev AY (2004)	2
CHFR	5	HDAC2	1	affinity chromatography technology, pull down	Oh YM (2009), Oh YM (2009)	2
SP1	0	EP300	36	affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, pull down, enzymatic study, affinity chromatography technology, two hybrid, imaging technique, pull down, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology	Gao J (2009), Goto T (2006), Hung JJ (2006), Hung JJ (2006), Hung JJ (2006), Choi HS (2002), Walker GE (2001), Kundu TK (2000), Suzuki T (2000), Suzuki T (2000), Wang X (2008), Wang X (2008), Wang X (2008), Chen YJ (2007), Chen YJ (2007), Azahri NS (2012), Azahri NS (2012), Li J (2013), Li J (2013), Wang SA (2014)	20
HDAC9	7	SMARCA4	19	affinity chromatography technology	Hang CT (2010)	1
KDM5B	27	HDAC2	1	affinity chromatography technology	Li Q (2011)	1
HDAC2	1	ESR1	0	affinity chromatography technology, affinity chromatography technology	Itoh Y (2007), Tarallo R (2011)	2
KDM1A	2	MTA1	3	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Wang Y (2009), Wang Y (2009), Cui S (2011), Cui S (2011)	4
TXNIP	2	TRIM28	1	bioid	Forred BJ (2016)	1
ESR1	0	WDR5	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Mo R (2006), Mo R (2006), Shi L (2011), Shi L (2011)	4
RBBP7	1	EED	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	5
KDM1A	2	CHD3	19	affinity chromatography technology, affinity chromatography technology	Wang Y (2009), Li Q (2011)	2
STAT3	0	PPARD	4	two hybrid	Grossmann A (2015)	1
DNMT1	5	DNMT3A	17	affinity chromatography technology, pull down, affinity chromatography technology	Kim GD (2002), Kim GD (2002), Rigbolt KT (2011)	3
UHRF2	1	RCOR1	0	affinity chromatography technology	Lai M (2016)	1
CTBP1	2	MECOM	4	affinity chromatography technology, genetic interference, genetic interference, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Chakraborty S (2001), Chakraborty S (2001), Chakraborty S (2001), Izutsu K (2001), Izutsu K (2001), Huttlin EL (2015), Huttlin EL (2017)	7
RUVBL2	4	BCL3	2	affinity chromatography technology, affinity chromatography technology	Kim JH (2005), Choi HJ (2010)	2
SIN3B	5	ARID4A	3	affinity chromatography technology, affinity chromatography technology	Lai A (2001), Lai A (2001)	2
APPL1	1	MTA2	1	affinity chromatography technology, pull down	Banach-Orlowska M (2009), Miaczynska M (2004)	2
MYOD1	0	EP300	36	pull down, genetic interference, pull down, pull down, pull down, affinity chromatography technology, imaging technique, affinity chromatography technology, pull down	Lau P (1999), Sartorelli V (1997), Sartorelli V (1997), Sartorelli V (1997), Magenta A (2003), Serra C (2007), Jin W (2011), Yuan W (1996), Yuan W (1996)	9
RBBP4	3	SIN3B	5	affinity chromatography technology	Hauri S (2016)	1
SMARCAD1	1	DMAP1	2	affinity chromatography technology	Rowbotham SP (2011)	1
EHMT2	4	DNMT3A	17	unspecified method, enzymatic study	Chang Y (2011), Chang Y (2011)	2
CEBPA	0	KLF5	4	affinity chromatography technology, affinity chromatography technology, imaging technique, imaging technique	Fujiu K (2011), Fujiu K (2011), Fujiu K (2011), Fujiu K (2011)	4
TP53	0	DDX5	2	affinity chromatography technology, affinity chromatography technology	Fogeron ML (2013), Horikawa I (2014)	2
NR3C1	2	NR0B2	1	protein complementation assay	Lievens S (2016)	1
CHD4	22	HIST1H3A	3	unspecified method, x-ray crystallography, x-ray crystallography, unspecified method	Mansfield RE (2011), Mansfield RE (2011), Allen HF (2014), Allen HF (2014)	4
CREBBP	29	RBBP7	1	pull down	Zhang Q (2000)	1
STAT3	0	RB1	2	affinity chromatography technology, affinity chromatography technology, imaging technique, pull down	Barre B (2005), Barre B (2005), Barre B (2005), Barre B (2005)	4
UHRF2	1	CHD3	19	affinity chromatography technology	Lai M (2016)	1
HDAC1	4	MIER1	2	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ding Z (2003), Ding Z (2003), Ding Z (2003), Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	7
RUNX1T1	1	ZBTB16	4	two hybrid, affinity chromatography technology, pull down, affinity chromatography technology, imaging technique	Melnick AM (2000), Melnick AM (2000), Melnick AM (2000), Melnick A (2000), Chen TC (2014)	5
SP1	0	DDX5	2	pull down	Miyamoto-Sato E (2010)	1
TP53	0	PARK7	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Fan J (2008), Fan J (2008), Kim SJ (2012)	3
HIST1H4A	0	NCOR2	12	pull down, affinity chromatography technology, pull down	Yu J (2003), Yu J (2003), Hartman HB (2005)	3
EP300	36	MORF4L1	1	pull down	Karmakar S (2010)	1
CREB1	1	TP53	0	pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique	Giebler HA (2000), Giebler HA (2000), Giebler HA (2000), Okoshi R (2011), Borger DR (2006), Chen TC (2014)	6
CREB1	1	CCDC6	3	affinity chromatography technology, affinity chromatography technology, pull down, imaging technique, enzymatic study	Leone V (2010), Leone V (2010), Leone V (2010), Leone V (2010), Leone V (2010)	5
ING1	2	PCNA	0	biochemical, affinity chromatography technology, affinity chromatography technology	Scott M (2001), Scott M (2001), Simpson F (2006)	3
SAP130	2	SUDS3	3	affinity chromatography technology	Fleischer TC (2003)	1
HDAC1	4	ESR1	0	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, imaging technique	Kawai H (2003), Kawai H (2003), Varshochi R (2005), Varshochi R (2005), Kurtev V (2004), Liu XF (2004), Itoh Y (2007), Tarallo R (2011), Yoshimaru T (2013)	9
EHMT2	4	CTBP1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ueda J (2006), Kuppuswamy M (2008), Huttlin EL (2015), Huttlin EL (2017)	4
BCL6	6	HDAC2	1	affinity chromatography technology	Bereshchenko OR (2002)	1
EZH2	4	HIST1H3A	3	enzymatic study, enzymatic study, affinity chromatography technology	Martin C (2006), Cha TL (2005), Cha TL (2005)	3
DNMT1	5	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique	Cui S (2011), Cui S (2011), Cai Y (2014), Cai Y (2014), Cai Y (2014), Cai Y (2014)	6
CDKN1A	1	ZBTB16	4	two hybrid	Vinayagam A (2011)	1
SMARCA4	19	HDAC2	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, genetic interference	Sif S (2001), Qiu Z (2008), Xu Z (2006), Pal S (2003), Battaglioli E (2002), Tando T (2010), Hang CT (2010), Shen JP (2017)	8
HDAC1	4	TOP2A	2	affinity chromatography technology, affinity chromatography technology, pull down, pull down, two hybrid	Tsai SC (2000), Johnson CA (2001), Johnson CA (2001), Johnson CA (2001), Johnson CA (2001)	5
BRMS1L	1	HDAC2	1	affinity chromatography technology	Nikolaev AY (2004)	1
CUL4B	8	SIN3A	13	affinity chromatography technology, affinity chromatography technology, pull down, biochemical	Ji Q (2014), Ji Q (2014), Ji Q (2014), Ji Q (2014)	4
PHB2	1	PHB	0	affinity chromatography technology, affinity chromatography technology, biochemical	He B (2008), He B (2008), Wan C (2015)	3
MBD2	1	KDM1A	2	affinity chromatography technology, affinity chromatography technology	Godmann M (2007), Godmann M (2007)	2
CREB1	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Canettieri G (2003), Kim HC (2010)	2
SINHCAF	0	HDAC2	1	affinity chromatography technology	Huttlin EL (2017)	1
RBL2	5	CCND1	1	two hybrid	Kong LJ (2006)	1
PML	7	RB1	2	affinity chromatography technology, affinity chromatography technology, pull down	Alcalay M (1998), Alcalay M (1998), Alcalay M (1998)	3
SNAI1	1	KDM1A	2	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Lin T (2010), Lin T (2010), Lin Y (2010), Lin Y (2010), Lin Y (2010), Lin Y (2010), Wu ZQ (2012), Lin Y (2010), Huttlin EL (2015), Rivero S (2015)	10
MBD2	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Brackertz M (2002), Ng HH (1999), Ng HH (1999), Ng HH (1999), Zhang Y (1999), Zhang Y (1999), Feng Q (2001), Humphrey GW (2001), Humphrey GW (2001), Godmann M (2007), Bantscheff M (2011), Joshi P (2013), Fujita H (2003), Hein MY (2015), Huttlin EL (2017), Boldt K (2016)	16
UHRF1	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Achour M (2008), Achour M (2008), Achour M (2009), Unoki M (2004), Unoki M (2004), Ma H (2012)	6
PARK7	0	HDAC2	1	affinity chromatography technology	Opsahl JA (2010)	1
MTA2	1	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical	Yao YL (2003), Yao YL (2003), Zhang Y (1998), Wang Y (2009), Cui S (2011), Havugimana PC (2012), Quan J (2014), Wan C (2015)	8
RUVBL2	4	TRIM28	1	affinity chromatography technology	Jeronimo C (2007)	1
MBD4	1	KDM1A	2	two hybrid	Weimann M (2013)	1
BRMS1L	1	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Nikolaev AY (2004), Nikolaev AY (2004), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	5
DNMT3L	2	NR3C1	2	pull down	Pacaud R (2014)	1
CREBBP	29	BCL6	6	enzymatic study	Pasqualucci L (2011)	1
CUL4B	8	DDB1	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Guerrero-Santoro J (2008), Guerrero-Santoro J (2008), Angers S (2006), Jin J (2006), Wang H (2006), Higa LA (2006), Higa LA (2006), Kawajiri K (2009), Bennett EJ (2010), Havugimana PC (2012), Ji Q (2014), Wan C (2015), Hein MY (2015), Mo Y (2017), Mo Y (2017), Yang Y (2015), Yang Y (2015), Yang Y (2015), Higa LA (2006), Higa LA (2006), Ohtake F (2007), Ohtake F (2007), Ohtake F (2007)	23
EP300	36	PARP1	3	affinity chromatography technology, enzymatic study, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Messner S (2009), Hassa PO (2005), Hassa PO (2005), Hassa PO (2005), Hassa PO (2008), Hassa PO (2008), Hassa PO (2003), Hassa PO (2003), Hassa PO (2003), Kim BK (2014), Kim BK (2014)	11
FOXK2	9	DMAP1	2	affinity chromatography technology	Li X (2015)	1
HDAC1	4	RUNX1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Reed-Inderbitzin E (2006), Guo H (2011), Guo H (2011), Guo H (2011), Shia WJ (2012), Leong WY (2016)	6
BHLHE41	0	HIF1A	1	affinity chromatography technology	Montagner M (2012)	1
HDAC1	4	BHLHE41	0	pull down, affinity chromatography technology, biochemical, imaging technique	Fujimoto K (2007), Li Y (2011), Matsunaga N (2012), Matsunaga N (2012)	4
SATB1	1	EP300	36	pull down, affinity chromatography technology, affinity chromatography technology	Fujii Y (2003), Fujii Y (2003), Fujii Y (2003)	3
DNMT3B	3	RBBP4	3	affinity chromatography technology	Cai Y (2014)	1
MIER2	0	PCGF6	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
DNMT3A	17	UHRF2	1	affinity chromatography technology	Zhang J (2011)	1
KMT2A	58	MBD3	4	affinity chromatography technology	Nakamura T (2002)	1
CHD4	22	GATAD2B	15	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Rahman S (2011), Huttlin EL (2015), Huttlin EL (2017)	3
CTBP1	2	CTNNB1	30	affinity chromatography technology, affinity chromatography technology	Hamada F (2004), Huard CC (2014)	2
SMARCAD1	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Rowbotham SP (2011), Rowbotham SP (2011)	2
SMARCA2	17	MBD3	4	affinity chromatography technology	Nakamura T (2002)	1
CREBBP	29	DAXX	5	two hybrid, affinity chromatography technology	Kuo HY (2005), Kuo HY (2005)	2
BCL6	6	PML	7	two hybrid	Dhordain P (2000)	1
MTA3	3	RBBP4	3	affinity chromatography technology, biochemical, affinity chromatography technology	Bantscheff M (2011), Wan C (2015), Hauri S (2016)	3
UHRF1	3	DNMT1	5	two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study, affinity chromatography technology, imaging technique, pull down, affinity chromatography technology	Achour M (2008), Achour M (2008), Achour M (2008), Achour M (2008), Jin W (2010), Achour M (2009), Felle M (2011), Felle M (2011), Felle M (2011), Felle M (2011), Qin W (2011), Du Z (2010), Du Z (2010), Zhang J (2011), Bostick M (2007), Bostick M (2007), Hervouet E (2010), Hervouet E (2010), Bashtrykov P (2014), De Vos M (2014), De Vos M (2014), Qin W (2015), Myrianthopoulos V (2016), Fang J (2016), Ferry L (2017)	25
GATAD1	0	BANP	1	affinity chromatography technology	Varier RA (2016)	1
EZH2	4	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	van der Vlag J (1999), van der Vlag J (1999), Caretti G (2004), Tong ZT (2012), Tong ZT (2012), Su L (2012), Su L (2012), Wan C (2015)	8
HDAC1	4	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Yao YL (2003), Yao YL (2003), Yao YL (2003), Mazumdar A (2001), Mazumdar A (2001), Yoo YG (2006), Liu XF (2004), Khaleque MA (2008), Terhune SS (2010), Xue Y (1998), Xue Y (1998), Cui S (2011), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hein MY (2015), Huttlin EL (2017), Millard CJ (2016), Millard CJ (2016)	21
BCL3	2	RCOR1	0	affinity chromatography technology	Keutgens A (2010)	1
EMSY	3	KDM5A	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Varier RA (2016), Varier RA (2016), Varier RA (2016)	3
WDR5	2	TCP1	0	affinity chromatography technology	Hauri S (2016)	1
ZMYND8	5	MTA3	3	affinity chromatography technology	Hein MY (2015)	1
POU2F1	5	NCOR2	12	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, imaging technique	Kakizawa T (2001), Kakizawa T (2001), Wang P (2009), Wang P (2009), Wang P (2009)	5
EED	1	ZMYM2	5	affinity chromatography technology	Cao Q (2014)	1
HDAC2	1	EMSY	3	affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Varier RA (2016)	2
NR2C1	0	RBBP7	1	affinity chromatography technology	Cui S (2011)	1
ING1	2	HIF1A	1	affinity chromatography technology, affinity chromatography technology	Bigot N (2015), Bigot N (2015)	2
STAT3	0	KDM1A	2	affinity chromatography technology, enzymatic study	Yang J (2010), Yang J (2010)	2
TRIM28	1	SIN3A	13	pull down	Nomura T (2004)	1
SAP30	1	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1998), Zhang Y (1998), Zhang Y (1998)	3
HIF1A	1	CTNNB1	30	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang KL (2014), Zhang KL (2014), Xi Y (2013)	3
SMARCA4	19	TOP2B	9	biochemical	Havugimana PC (2012)	1
GATAD1	0	E4F1	3	affinity chromatography technology	Varier RA (2016)	1
TRIM28	1	DNMT3B	3	affinity chromatography technology	Quenneville S (2011)	1
CTNNB1	30	SP1	0	affinity chromatography technology	Ponce E (2014)	1
SATB1	1	HDAC2	1	biochemical	Yasui D (2002)	1
AR	3	HDAC1	4	two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gaughan L (2002), Gaughan L (2002), Gaughan L (2005), Gaughan L (2005), Gobinet J (2005), Peche LY (2015)	6
ZBTB2	1	TP53	0	affinity chromatography technology, pull down	Jeon BN (2009), Jeon BN (2009)	2
CSNK2A1	15	BRMS1	1	enzymatic study, affinity chromatography technology	Liu Y (2016), Liu Y (2016)	2
MAGEB2	0	TRIM28	1	affinity chromatography technology, affinity chromatography technology	Doyle JM (2010), Doyle JM (2010)	2
TRERF1	1	DNTTIP1	0	affinity chromatography technology	Bantscheff M (2011)	1
TXNIP	2	HDAC1	4	affinity chromatography technology, pull down, affinity chromatography technology	Han SH (2003), Kwon HJ (2010), Kwon HJ (2010)	3
NFKB1	2	HDAC2	1	affinity chromatography technology	Sun JM (2007)	1
RERE	9	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Wang L (2006), Bantscheff M (2011)	2
HMG20A	0	RBBP7	1	affinity chromatography technology	Hein MY (2015)	1
KDM1A	2	RB1	2	affinity chromatography technology, affinity chromatography technology	Chau CM (2008), Chau CM (2008)	2
NR2C1	0	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011), Cui S (2011)	3
KDM5A	6	EED	1	affinity chromatography technology	Pasini D (2008)	1
RBBP7	1	SUDS3	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
BCL6	6	SMARCA4	19	affinity chromatography technology	Miles RR (2005)	1
DNMT3B	3	MTA1	3	affinity chromatography technology	Cai Y (2014)	1
SMARCAD1	1	MTA3	3	affinity chromatography technology	Rowbotham SP (2011)	1
RELA	1	SNAI1	1	affinity chromatography technology, affinity chromatography technology	Hsu DS (2014), Hsu DS (2014)	2
CDK2AP1	1	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Spruijt CG (2010), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017), Hauri S (2016)	5
CTBP1	2	CREBBP	29	affinity chromatography technology, pull down	Senyuk V (2005), Kim JH (2005)	2
HIST1H3A	3	HDAC2	1	affinity chromatography technology, enzymatic study, pull down	Nishioka K (2002), Gyoery I (2003), Li X (2014)	3
TLE1	6	HDAC1	4	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ahn JW (2009), Ahn JW (2009), Su L (2012), Su L (2012)	4
RBBP4	3	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Zhang Y (2003), Hakimi MA (2003), Zhang Y (2002), Tong JK (1998), Sun JM (2007), Sun JM (2007), Adenuga D (2010), Xue Y (1998), Xue Y (1998), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Wan C (2015), Hauri S (2016)	14
HDAC1	4	SIN3B	5	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1999), Koipally J (1999), Romm E (2005), Humphrey GW (2001), Terhune SS (2010), Joshi P (2013), Wan C (2015), Hein MY (2015), Hein MY (2015), Huttlin EL (2017)	10
CTNNB1	30	CREBBP	29	genetic interference, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ma H (2005), Sustmann C (2008), Taurin S (2006), Zhao Y (2016), Benoit YD (2017)	5
SFPQ	2	TOP2B	9	biochemical	Havugimana PC (2012)	1
KDM5B	27	KMT2A	58	genetic interference	Wong AS (2016)	1
PML	7	NCOR2	12	pull down, affinity chromatography technology	Khan MM (2001), Hong SH (2001)	2
GATAD1	0	TNRC18	8	affinity chromatography technology	Varier RA (2016)	1
HDAC2	1	HIST1H4A	0	enzymatic study, pull down	Gyoery I (2003), Li X (2014)	2
HIST1H3A	3	GATAD2B	15	pull down	Brackertz M (2006)	1
PML	7	SP1	0	affinity chromatography technology, pull down, imaging technique, affinity chromatography technology, enzymatic study	Vallian S (1998), Vallian S (1998), Chuang YS (2011), Li J (2014), Li J (2014)	5
KDM1A	2	ZMYM3	0	affinity chromatography technology, affinity chromatography technology	Hakimi MA (2003), Lee MG (2005)	2
KDM1A	2	NSD2	9	affinity chromatography technology	Marango J (2008)	1
RUVBL2	4	CTNNB1	30	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, pull down	Kim JH (2006), Lee JS (2010), Kim JH (2005), Kim JH (2005), Bauer A (2000)	5
CUL4B	8	NFKB1	2	affinity chromatography technology	Bennett EJ (2010)	1
DNMT1	5	DNMT3B	3	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, genetic interference, affinity chromatography technology, affinity chromatography technology	Lehnertz B (2003), Kim GD (2002), Kim GD (2002), Geiman TM (2004), Woloszynska-Read A (2007), OHagan HM (2011), Rigbolt KT (2011)	7
CREBBP	29	RELA	1	affinity chromatography technology, pull down, affinity chromatography technology, pull down, two hybrid, genetic interference, genetic interference, genetic interference, two hybrid, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, genetic interference, pull down, affinity chromatography technology, affinity chromatography technology, pull down	Jang HD (2004), Zhong H (2002), Zhong H (2002), Parry GC (1997), Parry GC (1997), Parry GC (1997), Aarnisalo P (1998), Gerritsen ME (1997), Gerritsen ME (1997), Gerritsen ME (1997), Gerritsen ME (1997), Liu GH (2008), Vanden Berghe W (1999), Naeaer AM (1999), Merika M (1998), Park J (2007), Verma UN (2004), Verma UN (2004), Verma UN (2004), Johnson J (2007), Aksoy E (2007), Azran I (2005), Silverman ES (1998), Huang WC (2007), Huang WC (2007), Aarnisalo P (1998), Kim HJ (1999), Hsu DS (2014), Chen Y (2015), Huang SM (2002)	30
PML	7	CREBBP	29	pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Matsuzaki K (2003), Matsuzaki K (2003), Matsuzaki K (2003), Doucas V (1999), Doucas V (1999), Zhong S (1999), Chen Y (2015)	7
NR2C1	0	NONO	3	affinity chromatography technology	Cui S (2011)	1
RBL2	5	SMARCA4	19	two hybrid	Dunaief JL (2002)	1
MTA3	3	RCOR1	0	affinity chromatography technology	Bantscheff M (2011)	1
SNAI2	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Peinado H (2004), Peinado H (2004), Wu ZQ (2012)	3
DAXX	5	TP53	0	affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, two hybrid, two hybrid, pull down, affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, unspecified method	Tang J (2006), Kim EJ (2003), Kim EJ (2003), Kim EJ (2003), Ohiro Y (2003), Ohiro Y (2003), Ohiro Y (2003), Ohiro Y (2003), Wethkamp N (2011), Zhao LY (2004), Zhao LY (2004), Zhao LY (2004), Gostissa M (2004), Gostissa M (2004), Gostissa M (2004), Gostissa M (2004), Gostissa M (2004), Zhao LY (2004), Zhao LY (2004), Zhang H (2013), Zhang H (2013), Chen TC (2014), Li Z (2017)	23
PARK7	0	MBD3	4	affinity chromatography technology	Opsahl JA (2010)	1
AR	3	GSE1	14	bioid	Lempiaeinen JK (2017)	1
GATAD1	0	SIN3B	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Hein MY (2015), Hein MY (2015), Varier RA (2016)	4
UHRF1	3	DNMT3B	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Meilinger D (2009), Meilinger D (2009), Zhang J (2011)	3
STAT3	0	DNMT1	5	affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology	Zhang Q (2005), Zhang Q (2005), Zhang Q (2005), Xing WJ (2015)	4
MBD3	4	GATAD2B	15	pull down, pull down, affinity chromatography technology, imaging technique, pull down, two hybrid, affinity chromatography technology, biochemical, two hybrid, affinity chromatography technology	Brackertz M (2002), Feng Q (2002), Feng Q (2002), Feng Q (2002), Gong Z (2006), Rolland T (2014), Huttlin EL (2015), Wan C (2015), Yu H (2011), Huttlin EL (2017)	10
CDK2AP1	1	MTA1	3	affinity chromatography technology	Hein MY (2015)	1
HDAC2	1	HELLS	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhou R (2009), Zhou R (2009), Myant K (2008)	3
EP300	36	ESR1	0	pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, two hybrid, enzymatic study, affinity chromatography technology, enzymatic study, pull down, pull down	Fajas L (2002), Fan S (2002), Fan S (2002), Fan S (2002), Kang YK (2002), Kang YK (2002), Hao L (2010), Jin W (2008), Cui Y (2006), Dutertre M (2003), Dutertre M (2003), Shiozawa T (2003), Kim SH (2010), Ma Y (2010), Ma Y (2010), Fujita T (2003), Likhite VS (2004), Band AM (2011), Loven MA (2004), Nalvarte I (2010), Yi P (2015)	21
SMARCA2	17	NONO	3	affinity chromatography technology	Ito T (2008)	1
PCGF6	0	TRIM28	1	affinity chromatography technology	Hauri S (2016)	1
DNMT3B	3	SIN3A	13	biochemical	Geiman TM (2004)	1
HDAC1	4	PPP1CC	2	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Gao J (2009), Brush MH (2004), Canettieri G (2003), Canettieri G (2003)	4
IKZF1	2	FOXK2	9	affinity chromatography technology	Huttlin EL (2017)	1
TOP2A	2	TOP2B	9	pull down, biochemical	Biersack H (1996), Havugimana PC (2012)	2
RCOR1	0	MECP2	36	affinity chromatography technology	Lunyak VV (2002)	1
CREBBP	29	TP73	2	pull down, pull down	Zeng X (2000), Lemasson I (2001)	2
HDAC1	4	RCOR3	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	4
ESR1	0	HIF1A	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Tarallo R (2011), Cho J (2005), Cho J (2005)	3
HDAC1	4	NKX3-2	1	pull down, pull down, affinity chromatography technology	Kim DW (2003), Kim DW (2003), Kim DW (2003)	3
SMARCAD1	1	NONO	3	affinity chromatography technology	Rowbotham SP (2011)	1
MBD2	1	CHD3	19	pull down, affinity chromatography technology	Zhang Y (1999), Feng Q (2001)	2
GATAD1	0	EMSY	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Hein MY (2015), Varier RA (2016), Varier RA (2016), Varier RA (2016), Varier RA (2016)	6
TXNIP	2	PARP1	3	bioid	Forred BJ (2016)	1
E2F1	0	UHRF2	1	affinity chromatography technology, affinity chromatography technology	Lu H (2013), Lu H (2013)	2
SIN3A	13	TGIF1	1	two hybrid, affinity chromatography technology, pull down	Sharma M (2001), Sharma M (2001), Sharma M (2001)	3
CEBPA	0	RB1	2	affinity chromatography technology, affinity chromatography technology	Bararia D (2008), Wang GL (2004)	2
NR0B2	1	TP53	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Yang Z (2012), Yang Z (2012), Yang Z (2012), Yang Z (2012), Yang Z (2012)	5
MYC	2	RUNX1	0	affinity chromatography technology	Agrawal P (2010)	1
CSNK2A1	15	BHLHE41	0	two hybrid	Wallach T (2013)	1
SAP30	1	SAP130	2	affinity chromatography technology	Hein MY (2015)	1
RBBP7	1	GATAD2B	15	pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Feng Q (2002), Feng Q (2002), Gong Z (2006), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	6
DMAP1	2	PCNA	0	affinity chromatography technology	Negishi M (2009)	1
ARID4B	1	SAP30	1	biochemical, affinity chromatography technology	Wan C (2015), Hein MY (2015)	2
DMAP1	2	HDAC1	4	pull down, affinity chromatography technology, affinity chromatography technology	Kang BG (2007), Kang BG (2007), Kang BG (2007)	3
UHRF2	1	NR2F2	4	affinity chromatography technology	Lai M (2016)	1
SMARCA4	19	CTNNB1	30	affinity chromatography technology, two hybrid	Barker N (2001), Barker N (2001)	2
ZBTB16	4	NR3C1	2	pull down	Martin PJ (2003)	1
RBBP4	3	SAP30L	0	affinity chromatography technology	Hauri S (2016)	1
BANP	1	PARP1	3	affinity chromatography technology	Sinha S (2012)	1
CHFR	5	PCNA	0	affinity chromatography technology	Oh YM (2009)	1
DNMT1	5	KDM1A	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Clements EG (2012), Clements EG (2012), Cui S (2011), Cui S (2011)	4
SINHCAF	0	TNRC18	8	affinity chromatography technology	Huttlin EL (2017)	1
MBD3	4	MBD2	1	two hybrid, pull down, two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology, two hybrid, two hybrid, pull down, affinity chromatography technology	Jiang CL (2004), Zhang Y (1999), Tatematsu KI (2000), Tatematsu KI (2000), Tatematsu KI (2000), Tatematsu KI (2000), Jin SG (2005), Jin SG (2005), Jin SG (2005), Feng Q (2001)	10
WDR5	2	RERE	9	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	3
SATB1	1	TAL1	0	affinity chromatography technology, affinity chromatography technology	Wen J (2005), Wen J (2005)	2
SP1	0	AR	3	affinity chromatography technology, affinity chromatography technology	Yuan H (2005), Chen PH (2008)	2
TP53	0	DNMT1	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Palii SS (2008), Zhang H (2013), Zhang H (2013)	3
TP73	2	HDAC2	1	affinity chromatography technology	Zhang J (2007)	1
MYC	2	EP300	36	affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, imaging technique, enzymatic study, affinity chromatography technology, affinity chromatography technology	Faiola F (2005), Faiola F (2005), Faiola F (2005), Faiola F (2005), Faiola F (2005), Zhang K (2005), Covic M (2005), Fujii M (2006)	8
SNAI1	1	DNMT1	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Liu T (2017), Yuan K (2016), Yuan K (2016)	3
UHRF1	3	TP53	0	affinity chromatography technology, pull down, pull down, enzymatic study	Ma J (2015), Ma J (2015), Ma J (2015), Ma J (2015)	4
ING2	0	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Doyon Y (2006), Huttlin EL (2015), Huttlin EL (2017)	4
KDM1A	2	CTBP1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Shi YJ (2005), Lee MG (2005), Kuppuswamy M (2008), Kuppuswamy M (2008), Keutgens A (2010), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	8
RELA	1	DNMT3B	3	imaging technique	Pacaud R (2014)	1
HDAC2	1	RUNX1T1	1	affinity chromatography technology	Amann JM (2001)	1
GATAD2B	15	GATAD2A	3	biochemical	Wan C (2015)	1
RUVBL2	4	CHD4	22	affinity chromatography technology	Cloutier P (2017)	1
EP300	36	E2F1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ji W (2014), Ianari A (2004), Aoki I (2012)	3
ESR1	0	DCAF1	5	affinity chromatography technology, affinity chromatography technology	Britschgi A (2017), Britschgi A (2017)	2
MYC	2	RCOR3	0	affinity chromatography technology	Agrawal P (2010)	1
PARK7	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Opsahl JA (2010), Opsahl JA (2010), Opsahl JA (2010)	3
ING1	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kuzmichev A (2002), Skowyra D (2001), Nikolaev AY (2004)	3
FOXK2	9	RBBP4	3	pull down	Shan L (2016)	1
MTA1	3	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Yao YL (2003), Yao YL (2003), Hakimi MA (2003), Mazumdar A (2001), Mazumdar A (2001), Mazumdar A (2001), Li DQ (2010), Yan C (2003), Balasenthil S (2007), Ohshiro K (2010), Xue Y (1998), Xue Y (1998), Cui S (2011), Bantscheff M (2011), Joshi P (2013), Wan C (2015)	16
MBD2	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Brackertz M (2002), Ng HH (1999), Zhang Y (1999), Angrisano T (2006), Feng Q (2001), Bantscheff M (2011), Joshi P (2013), Wan C (2015)	8
ZBTB16	4	MBD3	4	affinity chromatography technology	Choi WI (2014)	1
SAP30L	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Viiri KM (2006), Joshi P (2013), Huttlin EL (2017)	3
HDAC1	4	HIF1A	1	pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Mahon PC (2001), Yoo YG (2006), Kim SH (2007), Kim SH (2007), Bodily JM (2011), Yeh IJ (2013), Yeh IJ (2013)	7
HDAC1	4	POU2F1	5	affinity chromatography technology, affinity chromatography technology, imaging technique	Wang P (2009), Wang P (2009), Wang P (2009)	3
ZNF217	3	EHMT2	4	affinity chromatography technology	Banck MS (2009)	1
SMARCA2	17	HDAC1	4	biochemical, affinity chromatography technology, affinity chromatography technology	Sif S (2001), Nakamura T (2002), Hein MY (2015)	3
SP1	0	RBBP7	1	affinity chromatography technology	Yeh HH (2015)	1
RBBP4	3	BCL11A	14	affinity chromatography technology	Hauri S (2016)	1
PHB	0	RBL2	5	two hybrid, pull down, affinity chromatography technology	Wang S (1999), Wang S (1999), Wang S (1999)	3
RBBP7	1	PHF12	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	4
SP1	0	ESR1	0	imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, pull down	Koslowski M (2009), Jin W (2008), Dong J (2006), Dong J (2006), Castet A (2006), He S (2005), He S (2005), Varshochi R (2005), Varshochi R (2005), Petz LN (2004), Li D (2007), Itoh Y (2007), Saville B (2000), Gibson LL (2005)	14
UHRF2	1	YY1	7	far western blotting	Mori T (2011)	1
HIST1H2BA	0	PARP1	3	pull down, affinity chromatography technology, affinity chromatography technology	Messner S (2010), Huttlin EL (2015), Huttlin EL (2017)	3
HIST1H4A	0	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Saade E (2009), Huttlin EL (2017), Kleiner RE (2018), Kleiner RE (2018)	4
MYC	2	SAP130	2	pull down	Liu X (2003)	1
TRIM28	1	E2F4	0	affinity chromatography technology, affinity chromatography technology	Chen L (2012), Chen L (2012)	2
SYK	3	HDAC2	1	pull down	Wang L (2005)	1
SATB1	1	SIN3A	13	biochemical	Yasui D (2002)	1
CHFR	5	PML	7	fluorescent resonance energy transfe	Daniels MJ (2004)	1
PML	7	SPI1	1	affinity chromatography technology, affinity chromatography technology	Wang K (2010), Wang K (2010)	2
RB1	2	AR	3	pull down, pull down, two hybrid, affinity chromatography technology	Lu J (1998), Yeh S (1998), Yeh S (1998), Gamble SC (2007)	4
HIF1A	1	CREBBP	29	two hybrid, pull down, pull down, affinity chromatography technology, affinity chromatography technology, x-ray crystallography, affinity chromatography technology, pull down, pull down, fluorescent resonance energy transfe, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, two hybrid	Ema M (1999), Ema M (1999), Bhattacharya S (1999), Park YK (2008), Choi SM (2006), Matt T (2004), Hubbi ME (2012), Ruas JL (2010), Ruas JL (2010), Ruas JL (2010), Ruas JL (2010), Ruas JL (2005), Arany Z (1996), Ruas JL (2005), Gradin K (2002)	15
E2F1	0	CEBPD	0	affinity chromatography technology	Gery S (2005)	1
HDAC1	4	SIN3A	13	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (2003), Yao YL (2003), Yao YL (2003), Fleischer TC (2003), Fleischer TC (2003), Yang L (2003), Grozinger CM (1999), Zhang J (2002), Zhang J (2002), You A (2001), Zhang Y (1999), Zhang Y (2002), Tong JK (1998), Hassig CA (1998), Yasui D (2002), Huang EY (2000), Huang EY (2000), Kuzmichev A (2002), Kuzmichev A (2002), Martinowich K (2003), Martinowich K (2003), Suzuki M (2003), Suzuki M (2006), Nakamura T (2002), Wei Q (2005), Pflum MK (2001), Pflum MK (2001), Skowyra D (2001), Skowyra D (2001), Humphrey GW (2001), Sekhavat A (2007), Zhang Y (1998), Zhang Y (1998), Sun JM (2007), Karwowska-Desaulniers P (2007), Terhune SS (2010), Xue Y (1998), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Oh YM (2009), Wan C (2015), Hein MY (2015), Hsu DS (2014), Huttlin EL (2017)	45
HDAC1	4	TRIM28	1	affinity chromatography technology, affinity chromatography technology, biochemical	Allouch A (2011), Chen L (2012), Kristensen AR (2012)	3
YY1	7	RB1	2	affinity chromatography technology	Hu HM (2007)	1
ING2	0	BRMS1L	1	affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Huttlin EL (2017)	2
RELA	1	EZH2	4	affinity chromatography technology, affinity chromatography technology, pull down, pull down	Lee ST (2011), Lee ST (2011), Lee ST (2011), Lee ST (2011)	4
RBBP4	3	GATAD2B	15	pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Feng Q (2002), Feng Q (2002), Gong Z (2006), Huttlin EL (2017), Hauri S (2016)	5
HIST1H4A	0	HDAC1	4	pull down, pull down, affinity chromatography technology	Shiio Y (2003), Li X (2014), Hein MY (2015)	3
AR	3	NONO	3	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Ishitani K (2003), Ishitani K (2003), Ishitani K (2003), Dong X (2007)	4
MECP2	36	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Kimura H (2003), Martinowich K (2003), Suzuki M (2003), Suzuki M (2006)	4
CUL4B	8	HDAC2	1	affinity chromatography technology, affinity chromatography technology, biochemical	Ji Q (2014), Ji Q (2014), Ji Q (2014)	3
TAL1	0	PARP1	3	affinity chromatography technology	Goardon N (2006)	1
MIER2	0	SIN3A	13	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
HDAC9	7	TP53	0	affinity chromatography technology	Yuan Z (2010)	1
CCND1	1	STAT3	0	affinity chromatography technology, pull down, affinity chromatography technology	Bienvenu F (2001), Bienvenu F (2005), Bienvenu F (2005)	3
TAL1	0	CHD3	19	affinity chromatography technology, two hybrid	Hu X (2009), Goehler H (2004)	2
MBD3	4	CHD4	22	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Sakai H (2002), Cui S (2011), Havugimana PC (2012), Quan J (2014)	4
EP300	36	HDAC1	4	affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, enzymatic study, affinity chromatography technology	Han Y (2008), Mayanil CS (2006), Simone C (2004), Simone C (2004), Simone C (2004), Liu Y (2012), Mizuguchi Y (2012)	7
SNAI1	1	CHD4	22	affinity chromatography technology	Wu ZQ (2012)	1
SP1	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Won J (2002), Zhang Y (2002), Sun JM (2002), Glasspool RM (2005), Duan H (2005), Sekhavat A (2007), Itoh Y (2007), Marshall GM (2010), Tsai PF (2011), Schnur N (2007)	10
YY1	7	MYC	2	two hybrid, pull down	Shrivastava A (1993), Shrivastava A (1993)	2
NR3C1	2	KDM1A	2	bioid	Lempiaeinen JK (2017)	1
CREB1	1	DAXX	5	two hybrid, affinity chromatography technology, affinity chromatography technology	Huang YS (2012), Huang YS (2012), Huang YS (2012)	3
HIST1H3A	3	DAXX	5	affinity chromatography technology	Huttlin EL (2017)	1
BCL6	6	CHD3	19	affinity chromatography technology, affinity chromatography technology, pull down	Fujita N (2004), Fujita N (2004), Fujita N (2004)	3
CUL4B	8	EZH2	4	affinity chromatography technology	Yang Y (2015)	1
KDM5B	27	MTA3	3	affinity chromatography technology	Li Q (2011)	1
ARID4B	1	SUDS3	3	affinity chromatography technology	Fleischer TC (2003)	1
PPP1CC	2	NONO	3	pull down	Liu L (2011)	1
SP1	0	DNMT1	5	affinity chromatography technology, affinity chromatography technology	Esteve PO (2007), Esteve PO (2007)	2
MDM2	2	SMARCA2	17	pull down	Yasuhara T (2014)	1
HDAC1	4	SMAD7	1	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Simonsson M (2005), Simonsson M (2005), Simonsson M (2005), Laganiere J (2005)	4
CDKN1A	1	TLE1	6	two hybrid	Vinayagam A (2011)	1
PML	7	EZH2	4	affinity chromatography technology	Villa R (2007)	1
NONO	3	HDAC2	1	affinity chromatography technology	Zhang C (2008)	1
SPI1	1	BCL6	6	affinity chromatography technology, affinity chromatography technology, pull down, pull down	Wei F (2009), Wei F (2009), Wei F (2009), Wei F (2009)	4
CSNK2A1	15	SUDS3	3	enzymatic study	Zhang M (2011)	1
SMARCA2	17	MECP2	36	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Harikrishnan KN (2005), Harikrishnan KN (2005), Harikrishnan KN (2005), Vecsler M (2010)	4
NR2C1	0	AR	3	affinity chromatography technology, two hybrid	Mu X (2003), Mu X (2003)	2
RBBP7	1	GATAD2A	3	pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gong Z (2006), Havugimana PC (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	5
CDK2AP1	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Spruijt CG (2010), Bantscheff M (2011), Joshi P (2013), Hein MY (2015)	4
SNAI1	1	HIST1H3A	3	affinity chromatography technology	Lin Y (2010)	1
PPP1CC	2	CCND1	1	affinity chromatography technology	Flores-Delgado G (2007)	1
RUNX1	0	SMARCA4	19	affinity chromatography technology, affinity chromatography technology	Bakshi R (2010), Bakshi R (2010)	2
EED	1	SFPQ	2	affinity chromatography technology	Cao Q (2014)	1
PHF12	6	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Varier RA (2016)	2
TP53	0	SIN3B	5	affinity chromatography technology, two hybrid	Bansal N (2011), Bansal N (2011)	2
CSNK2A1	15	WDR5	2	affinity chromatography technology, affinity chromatography technology	Hauri S (2016), Hauri S (2016)	2
POU2F1	5	ESR1	0	pull down	Prefontaine GG (1999)	1
HIST1H3A	3	EED	1	far western blotting	Tie F (2007)	1
BHLHE41	0	MYOD1	0	pull down, pull down	Fujimoto K (2007), Fujimoto K (2007)	2
SP1	0	MYOD1	0	two hybrid	Biesiada E (1999)	1
HMG20B	2	GSE1	14	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
PPP1CC	2	ESR1	0	affinity chromatography technology	Flores-Delgado G (2007)	1
SFPQ	2	SIN3A	13	affinity chromatography technology, imaging technique, affinity chromatography technology	Tyson-Capper AJ (2009), Dong X (2007), Liu L (2011)	3
NCOR2	12	KLF5	4	affinity chromatography technology, two hybrid	Oishi Y (2008), Oishi Y (2008)	2
TAL1	0	RCOR1	0	affinity chromatography technology	Hu X (2009)	1
TRIM28	1	STAT3	0	affinity chromatography technology, pull down, affinity chromatography technology	Tsuruma R (2008), Tsuruma R (2008), Tsuruma R (2008)	3
FOXK2	9	SIN3B	5	affinity chromatography technology	Li X (2015)	1
CUL4B	8	WDR5	2	affinity chromatography technology	Higa LA (2006)	1
CHD4	22	MTA3	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Kwintkiewicz J (2011), Kwintkiewicz J (2011), Bantscheff M (2011), Wan C (2015)	4
MBD3	4	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical	Sakai H (2002), Noh EJ (2009), Noh EJ (2009), Sun JM (2007), Adenuga D (2010), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015)	9
HDAC2	1	OVOL1	2	affinity chromatography technology, affinity chromatography technology	Nair M (2007), Nair M (2007)	2
UHRF2	1	MBD3	4	affinity chromatography technology	Lai M (2016)	1
STAT3	0	PML	7	affinity chromatography technology, pull down	Kawasaki A (2003), Kawasaki A (2003)	2
MBD3L1	0	SIN3A	13	affinity chromatography technology	Jiang CL (2004)	1
RERE	9	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Wang L (2006), Joshi P (2013), Shen Y (2007), Hein MY (2015), Huttlin EL (2017)	5
HDAC1	4	SPI1	1	affinity chromatography technology, pull down, affinity chromatography technology	Suzuki M (2003), Suzuki M (2006), Kihara-Negishi F (2001)	3
HIST1H2BA	0	EHMT2	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
PCNA	0	RUVBL2	4	affinity chromatography technology	Ohta S (2002)	1
ESR1	0	RBBP7	1	pull down, affinity chromatography technology	Creekmore AL (2008), Tarallo R (2011)	2
NR3C1	2	HDAC2	1	affinity chromatography technology	Ito K (2000)	1
UHRF2	1	PARP1	3	affinity chromatography technology	Liu Y (2016)	1
CREBBP	29	MECOM	4	affinity chromatography technology, enzymatic study	Chakraborty S (2001), Chakraborty S (2001)	2
SIN3B	5	SAP130	2	affinity chromatography technology	Hein MY (2015)	1
CHD3	19	RBBP4	3	affinity chromatography technology, biochemical, affinity chromatography technology	Xue Y (1998), Havugimana PC (2012), Hauri S (2016)	3
SINHCAF	0	FOXK2	9	affinity chromatography technology	Huttlin EL (2017)	1
DNMT1	5	MBD3	4	affinity chromatography technology	Cui S (2011)	1
MYC	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Koch HB (2007), Hwang IY (2012)	2
SP1	0	RBBP4	3	affinity chromatography technology	Zhang Y (2002)	1
CHD5	12	HDAC2	1	affinity chromatography technology, biochemical	Quan J (2014), Wan C (2015)	2
SATB1	1	CTBP1	2	pull down, affinity chromatography technology, affinity chromatography technology	Purbey PK (2009), Purbey PK (2009), Purbey PK (2009)	3
HIST1H3A	3	GATAD2A	3	pull down	Brackertz M (2006)	1
BANP	1	EP300	36	affinity chromatography technology	Sinha S (2012)	1
BCL11B	3	SP1	0	pull down, pull down, affinity chromatography technology	Marban C (2005), Marban C (2005), Marban C (2005)	3
HIST1H2BA	0	RUVBL2	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
NFKB1	2	RELA	1	affinity chromatography technology, pull down, affinity chromatography technology, imaging technique, imaging technique, pull down, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, two hybrid, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bouwmeester T (2004), Palvimo JJ (1996), Dhar SK (2006), Williams SA (2006), Williams SA (2006), Hassa PO (2005), Hassa PO (2005), Sasaki CY (2005), Jeon YJ (2010), Urban MB (1991), Beauchef G (2012), Ryo A (2003), Burstein E (2005), Beinke S (2002), Sharif-Askari E (2010), Mifflin RC (2002), Nie M (2003), Nehra R (2010), Wang J (2011), Mellits KH (1993), Gallois C (1998), Milanovic M (2013), Milanovic M (2013), Kwon JH (2003), Cimen I (2011), Saha RN (2007), Wi SM (2014), Wi SM (2014), Hochrainer K (2012), Longoni N (2013), Li X (2015)	31
HDAC1	4	SERPINB5	0	affinity chromatography technology, pull down, affinity chromatography technology, two hybrid	Li X (2006), Li X (2006), Li X (2006), Yin S (2005)	4
HDAC1	4	SINHCAF	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	3
MIER2	0	EHMT2	4	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SMARCA4	19	CHD4	22	two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Shimono Y (2003), Shimono Y (2003), Shimono Y (2003), Mahajan MC (2005), Mahajan MC (2005), ONeill DW (2000)	6
HDAC1	4	HDAC2	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, imaging technique, affinity chromatography technology	Hakimi MA (2002), Yao YL (2003), Yao YL (2003), Hakimi MA (2003), Fischle W (2002), Johnson CA (2002), Fischle W (2001), Fischer DD (2002), Fischer DD (2002), Ashburner BP (2001), Zhang Y (1999), Tong JK (1998), Tong JK (1998), Hassig CA (1998), Hassig CA (1998), Zhang Y (1997), van der Vlag J (1999), van der Vlag J (1999), Noh EJ (2009), Noh EJ (2009), Galasinski SC (2002), Galasinski SC (2002), Galasinski SC (2002), He S (2005), Humphrey GW (2001), Park JH (2004), Park JH (2004), Sekhavat A (2007), Zhang Y (1998), Zhang Y (1998), Adenuga D (2010), Xue Y (1998), Xue Y (1998), Martinez FP (2012), Martinez FP (2012), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Joshi P (2013), Schnur N (2007), Schnur N (2007), Oh YM (2009), Wan C (2015), Hein MY (2015), Chen TC (2014), Huttlin EL (2017)	48
SMARCA2	17	SAP30	1	affinity chromatography technology	Nakamura T (2002)	1
PPARG	0	RB1	2	affinity chromatography technology, pull down, pull down	Fajas L (2002), Fajas L (2002), Fajas L (2002)	3
ING2	0	ARID4B	1	affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Huttlin EL (2017)	2
NONO	3	SIN3A	13	affinity chromatography technology	Liu L (2011)	1
MDM2	2	EZH2	4	affinity chromatography technology, affinity chromatography technology	Wienken M (2016), Wienken M (2016)	2
PPARG	0	SP1	0	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Costa V (2008), Singh AK (2010), Singh AK (2010), Zhang XH (2012), Zhang XH (2012), Zurlo D (2014), Zurlo D (2014)	7
MYC	2	DDX17	2	affinity chromatography technology	Agrawal P (2010)	1
RBBP7	1	PWWP2A	5	affinity chromatography technology	Hauri S (2016)	1
RBBP7	1	DDB1	6	affinity chromatography technology	Mouysset J (2015)	1
CDYL	1	MIER1	2	affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Huttlin EL (2017)	2
TP53	0	YY1	7	pull down, affinity chromatography technology, affinity chromatography technology, pull down, pull down, pull down, pull down, pull down	Groenroos E (2004), Groenroos E (2004), Sui G (2004), Sui G (2004), Sui G (2004), Wu S (2007), Wan M (2012), Kotlyar M (2015)	8
KDM5B	27	AR	3	affinity chromatography technology	Xiang Y (2007)	1
MDM2	2	CTBP1	2	far western blotting, affinity chromatography technology	Mirnezami AH (2003), Mirnezami AH (2003)	2
HIST1H3A	3	MTA2	1	affinity chromatography technology	Nishioka K (2002)	1
CREB1	1	CHD3	19	two hybrid	Stelzl U (2005)	1
CTBP1	2	CHD4	22	affinity chromatography technology	Huttlin EL (2017)	1
SINHCAF	0	BRMS1L	1	affinity chromatography technology	Huttlin EL (2017)	1
SP1	0	PARP1	3	affinity chromatography technology, affinity chromatography technology, enzymatic study	Zaniolo K (2007), Zaniolo K (2007), Zaniolo K (2007)	3
HDAC1	4	DDX17	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Wilson BJ (2004), Wilson BJ (2004), Mooney SM (2010), Mooney SM (2010)	4
PARP1	3	E2F1	0	pull down, imaging technique	Simbulan-Rosenthal CM (2003), Simbulan-Rosenthal CM (2003)	2
MORF4L1	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Wan C (2015), Huttlin EL (2017)	4
RB1	2	KDM5B	27	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Roesch A (2006), Roesch A (2006), Nijwening JH (2011), Roesch A (2005)	4
HIST1H4A	0	DAXX	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Saade E (2009), Saade E (2009), Hollenbach AD (2002), Huttlin EL (2017)	4
HIF1A	1	MTA1	3	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down	Yoo YG (2006), Yoo YG (2006), Yoo YG (2006), Moon HE (2006), Moon HE (2006)	5
SMAD2	5	SMAD7	1	genetic interference, pull down, affinity chromatography technology	Lebrun JJ (1999), Zhang S (2007), Yan X (2016)	3
CSNK2A1	15	HDAC2	1	enzymatic study, affinity chromatography technology, affinity chromatography technology, enzymatic study, biochemical, enzymatic study, biochemical	Sun JM (2002), Sun JM (2007), Adenuga D (2010), Tsai SC (2002), Havugimana PC (2012), Zhang M (2011), Wan C (2015)	7
CHD3	19	TP73	2	two hybrid	Minty A (2000)	1
RUVBL2	4	APPL1	1	affinity chromatography technology, affinity chromatography technology, pull down	Rashid S (2009), Rashid S (2009), Rashid S (2009)	3
MDM2	2	TRIM28	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Wang C (2005), Wang C (2005), Wang C (2005), Gilmore-Hebert M (2010), Okamoto K (2006), Okamoto K (2006), Okamoto K (2006)	7
SNAI1	1	MDM2	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Lim SO (2011), Lim SO (2010), Lim SO (2010)	3
SMAD7	1	TP53	0	affinity chromatography technology	Zhang S (2006)	1
DDB1	6	HDAC1	4	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Ji Q (2014), Ji Q (2014), Zhao R (2014), Romani B (2016)	4
ZMYND8	5	HDAC2	1	affinity chromatography technology	Hein MY (2015)	1
CREBBP	29	MDM2	2	affinity chromatography technology, enzymatic study, affinity chromatography technology	Inoue Y (2011), Wang X (2004), Sanchez M (2012)	3
PHF12	6	SIN3B	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Hein MY (2015), Varier RA (2016)	3
ARID4B	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Fleischer TC (2003), Joshi P (2013)	2
NR0B2	1	SMARCA2	17	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down	Kemper JK (2004), Kemper JK (2004), Kemper JK (2004), Kanamaluru D (2011), Miao J (2011), Miao J (2011)	6
RREB1	6	AR	3	affinity chromatography technology	Mukhopadhyay NK (2007)	1
SMARCA4	19	HIST1H3A	3	pull down, pull down, pull down	Lavigne M (2009), Lavigne M (2009), Kouskouti A (2005)	3
CEBPA	0	SFPQ	2	affinity chromatography technology	Bararia D (2008)	1
RERE	9	EP300	36	affinity chromatography technology	Shen Y (2007)	1
TRIM28	1	CREBBP	29	affinity chromatography technology	Seki Y (2010)	1
SP1	0	RELA	1	affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kuang PP (2002), Sif S (1994), Sif S (1994), Kao YS (2008), Kao YS (2008), Benjamin JT (2010), Beauchef G (2012), Xu Y (2008)	8
IKZF1	2	CHD3	19	pull down, two hybrid, affinity chromatography technology	Kim J (1999), Kim J (1999), Huttlin EL (2017)	3
MTA3	3	CHD3	19	affinity chromatography technology, biochemical	Fujita N (2003), Wan C (2015)	2
MTA3	3	GSE1	14	affinity chromatography technology	Bantscheff M (2011)	1
SP1	0	CCND1	1	affinity chromatography technology	Opitz OG (2000)	1
HIF1A	1	RB1	2	unspecified method, pull down, affinity chromatography technology	Budde A (2005), Budde A (2005), Budde A (2005)	3
HDAC1	4	PML	7	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, pull down, affinity chromatography technology, imaging technique, affinity chromatography technology	Khan MM (2001), Khan MM (2001), Wu WS (2001), Wu WS (2001), Wu WS (2001), Wu WS (2001), Wu WS (2001), Morey L (2008), Kuo HY (2013), Kim YE (2015)	10
SIN3A	13	ARID4A	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Lai A (2001), Lai A (2001), Suryadinata R (2011), Wan C (2015)	4
HDAC1	4	ZMYND8	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015), Hein MY (2015)	3
DNMT1	5	E2F1	0	biochemical	Robertson KD (2000)	1
SIN3A	13	IKZF1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Koipally J (2002), Koipally J (1999), Koipally J (2002), Koipally J (2002)	4
ZMYND8	5	MBD3	4	affinity chromatography technology	Hein MY (2015)	1
AR	3	E2F1	0	affinity chromatography technology, affinity chromatography technology	Li Y (2012), Li Y (2012)	2
ZMYND8	5	GATAD2A	3	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Huttlin EL (2017)	2
CREBBP	29	HIST1H3A	3	enzymatic study, enzymatic study, enzymatic study, enzymatic study, pull down, enzymatic study, enzymatic study, enzymatic study, enzymatic study	Senyuk V (2005), Perissi V (1999), Pasheva E (2004), Shen WF (2001), Kouskouti A (2005), Kouskouti A (2005), Yasuda J (2004), Tropberger P (2013), Das C (2009)	9
SNAI1	1	RCOR3	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
ESR1	0	CREBBP	29	pull down, pull down, pull down, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology	Sheppard HM (2001), Fan S (2002), Fan S (2002), Fan S (2002), Jin W (2008), Jaber BM (2004), Jaber BM (2004), Heery DM (1997), Ku TK (2007), Crowe DL (2006)	10
SFPQ	2	NONO	3	two hybrid, affinity chromatography technology, pull down, pull down, pull down, biochemical, two hybrid, affinity chromatography technology, biochemical, affinity chromatography technology	Peng R (2002), Peng R (2002), Peng R (2002), Ito T (2008), Dong X (2007), Havugimana PC (2012), Wang J (2011), Hall-Pogar T (2007), Wan C (2015), Huttlin EL (2017)	10
EZH2	4	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cao Q (2014), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	6
CREBBP	29	BRMS1	1	affinity chromatography technology	Kramer D (2015)	1
PARK7	0	GATAD2B	15	affinity chromatography technology	Opsahl JA (2010)	1
ING1	2	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kuzmichev A (2002), Nikolaev AY (2004), Nikolaev AY (2004), Huttlin EL (2015), Huttlin EL (2017)	5
MDM2	2	CUL4B	8	affinity chromatography technology	Latini P (2011)	1
NR2C1	0	MBD3	4	affinity chromatography technology	Cui S (2011)	1
HDAC1	4	UBTF	8	imaging technique, affinity chromatography technology, biochemical	Ali SA (2012), Ali SA (2012), Ali SA (2012)	3
HDAC1	4	ELMSAN1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Hein MY (2015), Huttlin EL (2017)	5
HIST1H3A	3	CREB1	1	affinity chromatography technology	Sun HS (2003)	1
BCL6	6	HDAC9	7	affinity chromatography technology	Miles RR (2005)	1
MDM2	2	DDB1	6	affinity chromatography technology, affinity chromatography technology	Latini P (2011), Jacob AG (2014)	2
PADI4	1	HDAC1	4	pull down, affinity chromatography technology, affinity chromatography technology, imaging technique	Denis H (2009), Denis H (2009), Denis H (2009), Denis H (2009)	4
DNMT3L	2	ESR1	0	pull down	Pacaud R (2014)	1
DNMT3L	2	NFKB1	2	pull down	Pacaud R (2014)	1
SAP30	1	SUDS3	3	affinity chromatography technology	Hein MY (2015)	1
ESR1	0	KDM5A	6	pull down, affinity chromatography technology	Chan SW (2001), Chan SW (2001)	2
EED	1	H2AFY	1	affinity chromatography technology	Cao Q (2014)	1
SAP30	1	RBBP7	1	affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1998), Zhang Y (1998), Zhang Y (1999), Kuzmichev A (2002), Lai A (2001), Zhang Y (1998), Zhang Y (1998), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017), Hauri S (2016)	11
SMARCA2	17	EP300	36	affinity chromatography technology	Zhang Y (2010)	1
YY1	7	CREB1	1	pull down, two hybrid	Zhou Q (1995), Zhou Q (1995)	2
PHF12	6	H2AFY	1	affinity chromatography technology	Varier RA (2016)	1
CSNK2A1	15	SPI1	1	enzymatic study	Mao C (1996)	1
DDX5	2	EP300	36	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology	Rossow KL (2003), Rossow KL (2003), Mooney SM (2010), Mooney SM (2010), Mooney SM (2010)	5
PPARD	4	NR0B2	1	two hybrid	Albers M (2005)	1
ARID4A	3	ARID4B	1	affinity chromatography technology	Wu MY (2006)	1
SP3	4	DNMT1	5	affinity chromatography technology, affinity chromatography technology	Esteve PO (2007), Esteve PO (2007)	2
AR	3	RBL1	1	affinity chromatography technology	Su S (2013)	1
CDKN1A	1	MDM2	2	affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, pull down, fluorescent resonance energy transfe, affinity chromatography technology, imaging technique	Zhang Z (2004), Zhang Z (2004), Zhang Z (2004), Jin Y (2003), Jin Y (2003), Wang B (2010), Xu H (2010), Xu H (2010), Frum R (2007), Chen TC (2014)	10
TXNIP	2	ZBTB16	4	affinity chromatography technology	Han SH (2003)	1
ING1	2	DMAP1	2	affinity chromatography technology, pull down	Xin H (2004), Xin H (2004)	2
CREBBP	29	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Ito K (2000), Adenuga D (2010)	2
TP73	2	MYC	2	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Uramoto H (2002), Uramoto H (2002), Uramoto H (2002), Watanabe K (2002), Watanabe K (2002)	5
MTA3	3	GATAD2B	15	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Bantscheff M (2011), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	4
PARK7	0	MTA2	1	affinity chromatography technology, affinity chromatography technology	Opsahl JA (2010), Opsahl JA (2010)	2
HIST1H2BA	0	HDAC2	1	pull down, affinity chromatography technology	Li X (2014), Huttlin EL (2017)	2
SATB1	1	MTA2	1	biochemical, affinity chromatography technology	Yasui D (2002), Yasui D (2002)	2
HDAC1	4	PPARD	4	affinity chromatography technology, affinity chromatography technology, pull down	Shi Y (2002), Aarenstrup L (2008), Aarenstrup L (2008)	3
SIN3B	5	SMARCA2	17	pull down	Pal S (2003)	1
EZH2	4	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	van der Vlag J (1999), van der Vlag J (1999), Tong ZT (2012), Tong ZT (2012), Wan C (2015)	5
CREBBP	29	DDX17	2	affinity chromatography technology, pull down	Shin S (2007), Shin S (2007)	2
TP53	0	SMAD2	5	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, imaging technique	Cordenonsi M (2003), Cordenonsi M (2003), Tateossian H (2009), Lu D (2013), Chen TC (2014)	5
NR3C1	2	PARP1	3	bioid	Lempiaeinen JK (2017)	1
EZH2	4	SIN3A	13	affinity chromatography technology	Hauri S (2016)	1
CTBP1	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Koipally J (2000), Glasspool RM (2005), Kuppuswamy M (2008), Kuppuswamy M (2008), Mendez LM (2008)	5
KDM1A	2	ZNF217	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2003), Banck MS (2009), Thillainadesan G (2008), Shi YJ (2005), Lee MG (2005), Kuppuswamy M (2008)	6
SP3	4	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Won J (2002), Sun JM (2002), Wooten-Blanks LG (2007)	3
HDAC1	4	UHRF2	1	affinity chromatography technology, affinity chromatography technology, far western blotting, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Unoki M (2004), Unoki M (2004), Mori T (2011), Zeng S (2017), Zeng S (2017), Lai M (2016)	6
ESR1	0	EHMT2	4	pull down	Purcell DJ (2011)	1
PPARG	0	SMAD2	5	affinity chromatography technology	Lu D (2013)	1
CTNNB1	30	SATB1	1	pull down, affinity chromatography technology, affinity chromatography technology	Notani D (2010), Notani D (2010), Notani D (2010)	3
ING1	2	CREBBP	29	affinity chromatography technology, affinity chromatography technology	Vieyra D (2002), Vieyra D (2002)	2
SNAI1	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Peinado H (2004), Peinado H (2004), Kim Y (2010), Tong ZT (2012), Tong ZT (2012), Hsu DS (2014)	6
NR2C1	0	DNMT1	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011), Cui S (2011)	3
MBD3L1	0	CHD3	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
CHD3	19	RBBP7	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Havugimana PC (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	4
ESR1	0	SP3	4	affinity chromatography technology	Dong J (2006)	1
CREBBP	29	CDKN1A	1	affinity chromatography technology, imaging technique	Fritah A (2005), Chen TC (2014)	2
UHRF2	1	HIST1H3A	3	unspecified method, affinity chromatography technology	Zhang J (2011), Zhang T (2017)	2
CREBBP	29	WDR5	2	affinity chromatography technology	Koues OI (2009)	1
EZH2	4	H2AFY	1	affinity chromatography technology	Cao Q (2014)	1
PML	7	ZBTB16	4	two hybrid, pull down, affinity chromatography technology	Koken MH (1997), Koken MH (1997), Koken MH (1997)	3
EED	1	SMARCA4	19	affinity chromatography technology	Cao Q (2014)	1
CCDC6	3	NR3C1	2	biochemical	Kristensen AR (2012)	1
APPL1	1	TP53	0	two hybrid	Grossmann A (2015)	1
NR3C1	2	CREB1	1	pull down, affinity chromatography technology	Imai E (1993), Guo C (2010)	2
EHMT2	4	PML	7	affinity chromatography technology, affinity chromatography technology	Lusic M (2013), Lusic M (2013)	2
MBD3L1	0	MBD2	1	two hybrid, pull down, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Jiang CL (2004), Jiang CL (2004), Jiang CL (2004)	4
ARID4A	3	RBBP4	3	affinity chromatography technology	Lai A (2001)	1
ESR1	0	MYC	2	affinity chromatography technology	Cheng AS (2006)	1
DDB1	6	SAP30	1	affinity chromatography technology, affinity chromatography technology	Ji Q (2014), Ji Q (2014)	2
E2F1	0	NCOR2	12	pull down	Miyamoto-Sato E (2010)	1
PPARG	0	NCOR2	12	imaging technique, imaging technique, two hybrid, affinity chromatography technology, affinity chromatography technology, unspecified method, pull down, two hybrid, pull down, unspecified method	Guan HP (2005), Guan HP (2005), Albers M (2005), Lefebvre B (2010), Song K (2013), Lee G (2002), Carmona MC (2007), Tagami T (2009), Jeninga EH (2007), Koppen A (2009)	10
FOXK2	9	ARID4B	1	affinity chromatography technology	Li X (2015)	1
MECOM	4	HDAC1	4	affinity chromatography technology, pull down, affinity chromatography technology	Vinatzer U (2001), Vinatzer U (2001), Chakraborty S (2001)	3
CDK2AP1	1	ZMYND8	5	affinity chromatography technology	Hein MY (2015)	1
RBBP7	1	SIN3B	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017), Hauri S (2016)	4
TRIM28	1	PARP1	3	affinity chromatography technology	Quenet D (2008)	1
HDAC2	1	GATAD2A	3	biochemical, affinity chromatography technology, affinity chromatography technology	Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013)	3
MDM2	2	TP53	0	enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology, biochemical, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, x-ray crystallography, pull down, protein complementation assay, affinity chromatography technology, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, enzymatic study, enzymatic study, two hybrid, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, pull down, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, pull down, pull down, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, pull down, pull down, unspecified method, affinity chromatography technology, two hybrid, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, protein complementation assay, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, x-ray crystallography, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, x-ray crystallography, x-ray crystallography, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method, far western blotting, affinity chromatography technology, x-ray crystallography, unspecified method, pull down, pull down, pull down, unspecified method, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, x-ray crystallography, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, genetic interference, fluorescent resonance energy transfe, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study, biochemical, unspecified method, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, pull down, two hybrid, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, two hybrid, pull down, enzymatic study, enzymatic study, enzymatic study, affinity chromatography technology, enzymatic study, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, enzymatic study, enzymatic study, pull down, enzymatic study, affinity chromatography technology, pull down, pull down, affinity chromatography technology, pull down, pull down, x-ray crystallography, protein complementation assay, imaging technique, affinity chromatography technology, enzymatic study, affinity chromatography technology, fluorescent resonance energy transfe, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, enzymatic study, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, fluorescent resonance energy transfe, pull down, affinity chromatography technology, pull down, enzymatic study, enzymatic study, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, x-ray crystallography, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, unspecified method, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, pull down, pull down, unspecified method, affinity chromatography technology, imaging technique, enzymatic study, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method, pull down, enzymatic study, pull down, pull down, unspecified method, fluorescent resonance energy transfe, two hybrid, pull down	Li M (2003), Latonen L (2001), Zhang Y (2003), Zhang Y (2003), Kurki S (2003), Kurki S (2003), Freeman DJ (2003), Ito A (2002), Ito A (2002), Grossman SR (1998), Fang S (2000), Liu G (2000), Zhang Y (1998), Zhang Y (1998), Chen J (1993), Thut CJ (1997), Leung KM (2002), Wawrzynow B (2009), Ochocka AM (2009), Chen D (2009), Hedstroem E (2009), Brenkman AB (2008), Qiu W (2008), Qiu W (2008), Zhang Z (2008), Muller P (2008), Colaluca IN (2008), Colaluca IN (2008), Colaluca IN (2008), Tang Y (2008), Tang Y (2008), Lu X (2007), Lukashchuk N (2007), Lukashchuk N (2007), Lee JH (2007), Carter S (2007), Sasaki M (2007), Brooks CL (2007), Li L (2007), Becker K (2007), Zhao BX (2006), Zhao BX (2006), Abida WM (2007), Yang WH (2006), Ma J (2006), Wallace M (2006), Shimizu H (2006), Andrews P (2006), Yang J (2009), Zhu Z (2009), Wang C (2005), Higashitsuji H (2005), Higashitsuji H (2005), Yan C (2005), Vega FM (2004), Dai MS (2004), Dai MS (2004), Groenroos E (2004), Ohkubo S (2006), Sui G (2004), Di Stefano V (2004), Brignone C (2004), Katayama H (2004), Linares LK (2003), OKeefe K (2003), Wang W (2003), Blattner C (2002), Matt T (2004), Matt T (2004), Eyckerman S (2005), Shimizu H (2002), Shimizu H (2002), Migliorini D (2002), Gu J (2001), Sengupta S (2001), Chernov MV (2001), Cross B (2011), Cross B (2011), Cross B (2011), Buschmann T (2001), Nakamura S (2000), Rodriguez MS (2000), Rodriguez MS (2000), Geyer RK (2000), Zaika A (1999), Maki CG (1999), Chen L (2010), Chen L (2010), Lin RK (2010), Fuchs SY (1998), Xirodimas DP (2001), Fuchs SY (1998), Inoue T (2001), Wu L (2011), Du W (2009), Li DQ (2009), Illuzzi JL (2011), Oliver TG (2011), Kim MM (2007), Marchenko ND (2007), Vaseva AV (2009), Vaseva AV (2009), Lai KP (2010), Naderi EH (2011), Zdzalik M (2010), Singh RK (2007), Meng L (2011), Moore L (2007), Kim S (2010), Inoue Y (2011), Fraser JA (2010), Worrall EG (2009), Wu H (2011), Wang KS (2011), Wang KS (2011), Wang KS (2011), Izumi T (2010), Huang YF (2009), Tang J (2006), Tang J (2006), Fu X (2010), Fu X (2010), Shloush J (2011), Yadavilli S (2009), Stevenson LF (2007), Suzuki T (2010), Cheng Q (2009), Kulikov R (2010), Kulikov R (2010), Li L (2010), Li L (2010), Cheng Q (2011), Li D (2011), Nie J (2010), Demma M (2010), Sun XX (2011), Jung CR (2010), Jung CR (2010), Jung CR (2010), Jung CR (2010), Nishida T (2011), Li M (2011), Li M (2011), Amson R (2011), Amson R (2011), Bhatt P (2011), David Y (2011), Zhang Y (2010), Liu J (2010), Liu J (2010), Song MS (2008), Cummins JM (2004), Kim CK (2010), Kim CK (2010), Yan C (2010), Wang X (2011), Phillips A (2010), Phillips A (2010), Kang HN (2011), Kang HN (2011), Wang X (2004), Sionov RV (2001), Wei S (2012), Camus S (2012), Ding B (2012), Yang Z (2012), Yang Z (2012), Tripathi V (2007), Tripathi V (2007), Dai C (2011), Chen S (2012), Honda R (1997), Kinyamu HK (2003), Zhan C (2012), Zhan C (2012), Lee CW (2010), Zhou X (2012), Bouska A (2008), Wade M (2012), Ferreon JC (2009), Domenici F (2011), Uldrijan S (2007), Uldrijan S (2007), Stad R (2000), Stad R (2000), Banks D (2006), Banks D (2006), Bernal F (2010), Bernal F (2010), Jain AK (2012), Kane SA (2000), Tan Z (2000), Yang Z (2012), Wawrzynow B (2007), Wawrzynow B (2007), Wawrzynow B (2007), Hiramatsu K (2006), Bao-Lei T (2006), Kulikov R (2005), Yang Y (2005), Lindstroem MS (2007), Bech-Otschir D (2001), Li Y (2012), Gillotin S (2010), Burch L (2004), Liu WL (2001), OHagan HM (2004), OHagan HM (2004), Funari G (2009), Candeias MM (2008), Brew CT (2006), Wang J (2011), Calabro V (2002), Burch L (2004), Iyappan S (2010), Poyurovsky MV (2010), Poyurovsky MV (2010), Poyurovsky MV (2010), Kurki S (2004), Tian LF (2006), Wang J (2006), Bae S (2012), Bae S (2012), Frazier DP (2012), Frazier DP (2012), Lew QJ (2012), Lew QJ (2012), Huart AS (2012), Li Z (2004), Balint E (1999), Balint E (1999), Funston G (2012), Dou X (2012), Sadagopan S (2012), Sadagopan S (2012), Dixit D (2012), Roxburgh P (2012), Xu L (2012), Drago-Ferrante R (2008), Li H (2009), Negorev D (2001), Wang X (2012), Wang X (2012), Wang X (2012), Boettger A (1997), Jung H (2008), Oliner JD (1992), Seemann S (2005), Kawai H (2007), Schuster K (2007), Dawson R (2003), DArcy P (2009), Schon O (2004), Schon O (2004), Hogan C (2008), Lottin-Divoux S (2005), Latini P (2011), Latini P (2011), Latini P (2011), McCoy MA (2003), Kussie PH (1996), Shieh SY (1997), Shieh SY (1997), Naski N (2009), Naski N (2009), Schon O (2002), Tamborini E (2001), Wade M (2006), Wade M (2006), Lohrum MA (2003), Garcia JF (2002), Garcia JF (2002), Kallen J (2009), Kulikov R (2006), Kulikov R (2006), Czarna A (2009), Czarna A (2009), Hu B (2007), Chi SW (2005), Yu GW (2006), Yu GW (2006), Saji S (2001), Chen L (1997), Zhang H (1998), Issaeva N (2004), Wade M (2008), Wade M (2008), Chen HF (2007), Chen HF (2007), Li HH (2004), Wang J (2011), Gu L (2009), Gu L (2009), Meng L (2008), Meng L (2008), Okamoto K (2006), Malaguarnera R (2008), Zhou M (2003), Zhou M (2003), Di Conza G (2012), Xirodimas DP (2004), Auger KR (2005), Li J (2011), Li J (2011), Li J (2011), Lee SJ (2007), Chau JF (2012), Lu X (2005), Mazars A (2010), Mazars A (2010), Mazars A (2010), Olson DC (1993), Picksley SM (1994), Issaeva N (2004), Issaeva N (2004), Zhang J (2012), Wen W (2013), Wen W (2013), Bursac S (2012), Yang Y (2013), Yang Y (2013), Landre V (2013), Pettersson S (2012), Thin TH (2007), Thin TH (2007), Piccinin S (2012), Shan B (2012), Caratozzolo MF (2012), Lui K (2013), Kobet E (2000), Lim KH (2010), Ranaweera RS (2013), Cui D (2013), Ebina M (2013), He Y (2013), He Y (2013), Siepe D (2009), Suh HW (2013), Zhan YA (2013), Wang J (2011), Hjerpe R (2010), Murray MF (2007), Jin L (2013), Jin L (2013), Zhang R (2013), Yan S (2013), Sun XX (2011), Heyne K (2014), Heyne K (2014), Bista M (2013), Jin J (2014), Mikawa T (2014), Qi M (2014), Cheng Q (2014), Zhang HH (2014), Perry ME (2000), Nishizaki M (2004), Sanchez-Aguilera A (2006), Chen YC (2013), Bertamino A (2013), Ding G (2013), Kubo N (2013), Kubo N (2013), Hsueh KW (2013), Kofod-Olsen E (2014), Fogeron ML (2013), Chang YS (2013), Gotoh T (2014), Gotoh T (2014), Oi N (2014), Corcoran CA (2009), Corcoran CA (2009), Ayroldi E (2014), Wu G (2014), Rajendra R (2004), Zhang J (2014), Lee MG (2014), Lee MG (2014), Freedman DA (1997), Freedman DA (1997), Saxena A (2006), Shi D (2009), Lohrum MA (2001), Lohrum MA (2001), Grossman SR (2003), Yan S (2013), Xirodimas DP (2004), Yasuhara T (2014), Yasuhara T (2014), Yasuhara T (2014), Yasuhara T (2014), Saville MK (2004), Rodriguez MS (1999), Lui K (2013), Wu PY (2003), Pavithra L (2009), He Y (2013), Tan BX (2014), Huttlin EL (2015), Marcar L (2015), Borcherds W (2014), Borcherds W (2014), Li YC (2014), Ayroldi E (2014), Ling X (2014), Batuello CN (2015), Zhu N (2006), Mo XL (2015), Chen TC (2014), Stindt MH (2015), Caratozzolo MF (2014), Li X (2015), Saxena R (2016), Reed SM (2014), Du C (2016), Du C (2016), Du C (2016), Fraser JA (2015), Fraser JA (2015), Wu B (2015), Qin JJ (2015), Raza S (2015), Raza S (2015), Yamauchi T (2014), Yamauchi T (2014), Yamauchi T (2014), Shi Y (2010), Ahn HJ (2015), Lim KH (2015), Kang JH (2016), Chen J (2015), Liu X (2016), Yang P (2016), Yang P (2016), Liu D (2016), Liu D (2016), Liu D (2016), Datta D (2015), Reddy BA (2014), He X (2016), Shostak K (2014), Liu LJ (2016), Liu LJ (2016), Stegh AH (2010), Liu XH (2005), Medina-Medina I (2016), Medina-Medina I (2016), Kayama K (2017), Singh AK (2016), Liu WT (2016), Yue X (2016), Soares J (2015), Mukhopadhyay R (2016), Mukhopadhyay R (2016), Zhou X (2016), Zhou X (2016), Xie X (2016), Leao M (2015), Luo H (2016), Luo H (2016), Xie N (2016), Maeda R (2017), Maeda R (2017), Maeda R (2017), Sheng W (2017), Sheng W (2017), Liu M (2010), Huttlin EL (2017), Chauhan KM (2016), Goetz C (1999), Zhang J (2017), Unger T (1999), Liu Z (2004), Wu W (2015), Tan G (2017), Nomura K (2017), Lu W (2017), Lu W (2017), Hjerrild M (2001), Landre V (2017), Landre V (2017), Landre V (2017), Landre V (2017), Shangary S (2008), Shangary S (2008), Du WW (2017), Du WW (2017), Bista M (2013), Bista M (2013), Jin M (2017), LaRusch GA (2007), LaRusch GA (2007), Kurokawa M (2013), Ivanov AA (2017), Wong JH (2017), Wong JH (2017)	496
ARID4A	3	CCND1	1	enzymatic study	Suryadinata R (2011)	1
RUNX1	0	PML	7	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique	Kraemer OH (2008), Nguyen LA (2005), Nguyen LA (2005), Nguyen LA (2005), Nguyen LA (2005)	5
CSNK2A1	15	SFPQ	2	enzymatic study	Zhang M (2011)	1
RB1	2	E4F1	3	two hybrid, pull down, affinity chromatography technology	Fajas L (2000), Fajas L (2000), Fajas L (2000)	3
CUL4B	8	DCAF1	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bennett EJ (2010), Jin J (2006), Hein MY (2015), Wang X (2017)	4
CTNNB1	30	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vietor I (2005), Billin AN (2000), Iguchi H (2007), Iioka H (2009)	4
CDYL	1	RBBP4	3	affinity chromatography technology	Bantscheff M (2011)	1
EZH2	4	MYOD1	0	affinity chromatography technology	Caretti G (2004)	1
BANP	1	TP53	0	pull down, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Pavithra L (2009), Pavithra L (2009), Sinha S (2010), Sinha S (2010), Sinha S (2010), Sinha S (2012), Pavithra L (2009)	7
RBL1	1	E2F1	0	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Dyson N (1993), Dyson N (1993), Moberg K (1996), Dhillon NK (2002), Su S (2013), Trimarchi JM (1998)	6
CREB1	1	ZMYM2	5	two hybrid	Bandyopadhyay S (2010)	1
CREB1	1	EP300	36	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, far western blotting, pull down	Hussain MA (1999), Magenta A (2003), Subbaramaiah K (2011), Solomou EE (2001), Subbaramaiah K (2012), Tung WH (2011), Tung WH (2011), Lundblad JR (1995), Lundblad JR (1995)	9
CCND1	1	UBTF	8	enzymatic study	Voit R (1999)	1
STAT3	0	MYOD1	0	affinity chromatography technology, affinity chromatography technology, pull down	Kataoka Y (2003), Kataoka Y (2003), Kataoka Y (2003)	3
FOXK2	9	EMSY	3	affinity chromatography technology	Li X (2015)	1
UHRF2	1	CUL4B	8	affinity chromatography technology	Lai M (2016)	1
SIN3A	13	MBD3	4	affinity chromatography technology	Nakamura T (2002)	1
RBBP7	1	ZBTB2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MTA1	3	SIN3A	13	affinity chromatography technology	Yao YL (2003)	1
EED	1	DDX17	2	affinity chromatography technology	Cao Q (2014)	1
SMAD2	5	TGIF1	1	two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Wotton D (1999), Wotton D (1999), Wotton D (1999), Pessah M (2001)	4
BCL11B	3	RBBP7	1	affinity chromatography technology, affinity chromatography technology, pull down	Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005)	3
RBL1	1	SP1	0	affinity chromatography technology, affinity chromatography technology	Datta PK (1995), Datta PK (1995)	2
FOXK2	9	CHD4	22	affinity chromatography technology	Li X (2015)	1
ZMYM2	5	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gocke CB (2008), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	4
HDAC9	7	SIN3B	5	pull down	Petrie K (2003)	1
DNTTIP1	0	ELMSAN1	4	affinity chromatography technology, biochemical, affinity chromatography technology	Bantscheff M (2011), Wan C (2015), Hein MY (2015)	3
CTBP1	2	DNMT1	5	imaging technique	Kiskinis E (2007)	1
PHB2	1	MYOD1	0	affinity chromatography technology, two hybrid	Sun L (2004), Sun L (2004)	2
HDAC1	4	HMG20B	2	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2002), Hakimi MA (2002), Hakimi MA (2002), Hakimi MA (2002), Bantscheff M (2011), Joshi P (2013), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	9
EED	1	RUVBL2	4	affinity chromatography technology	Cao Q (2014)	1
DDB1	6	PCNA	0	affinity chromatography technology	Angers S (2006)	1
TP53	0	DDB1	6	affinity chromatography technology	Fogeron ML (2013)	1
CHD4	22	EP300	36	affinity chromatography technology, affinity chromatography technology, pull down	Qi W (2016), Qi W (2016), Qi W (2016)	3
GATAD1	0	ING2	0	affinity chromatography technology	Varier RA (2016)	1
CTBP1	2	CDYL	1	affinity chromatography technology	Kuppuswamy M (2008)	1
HDAC2	1	RBL1	1	affinity chromatography technology	Lai A (1999)	1
MDM2	2	SMARCA4	19	unspecified method	Nicholson J (2014)	1
MBD4	1	SIN3A	13	two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, two hybrid	Kondo E (2005), Kondo E (2005), Kondo E (2005), Kondo E (2005), Kondo E (2005)	5
CREB1	1	STAT3	0	affinity chromatography technology	Wang W (2015)	1
DNMT3L	2	CREM	1	pull down	Pacaud R (2014)	1
ING1	2	SIN3A	13	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kuzmichev A (2002), Kuzmichev A (2002), Skowyra D (2001), Skowyra D (2001), Skowyra D (2001), Nikolaev AY (2004), Nikolaev AY (2004)	7
NSD2	9	HIST1H3A	3	enzymatic study, bioid, enzymatic study, pull down	Kang HB (2009), Lambert JP (2015), Morishita M (2014), Sankaran SM (2016)	4
RUNX1T1	1	SIN3A	13	pull down, affinity chromatography technology, affinity chromatography technology	Hildebrand D (2001), Amann JM (2005), Zhang J (2004)	3
HDAC1	4	KDM1A	2	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2002), Hakimi MA (2003), You A (2001), You A (2001), Shi YJ (2005), Lee MG (2005), Humphrey GW (2001), Humphrey GW (2001), Humphrey GW (2001), Godmann M (2007), Godmann M (2007), Terhune SS (2010), Godmann M (2010), Godmann M (2010), Wang Y (2009), Nicholson TB (2011), Li Q (2011), Cui S (2011), Cui S (2011), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hein MY (2015), Wang Q (2016), Huttlin EL (2017)	26
UHRF1	3	TOP2A	2	pull down, affinity chromatography technology	Lu LY (2015), Lu LY (2015)	2
CREM	1	HDAC1	4	affinity chromatography technology, pull down, pull down	Tenbrock K (2006), Tenbrock K (2006), Tenbrock K (2006)	3
HDAC2	1	MIER2	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Huttlin EL (2015), Huttlin EL (2017)	3
CUL4B	8	HDAC1	4	affinity chromatography technology, affinity chromatography technology, biochemical	Ji Q (2014), Ji Q (2014), Ji Q (2014)	3
NSD2	9	HDAC2	1	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Marango J (2008), Marango J (2008), Kim JY (2008), Kim JY (2008)	4
UHRF1	3	H2AFY	1	affinity chromatography technology	Ferry L (2017)	1
CUL4B	8	DNMT3A	17	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, imaging technique	Yang Y (2015), Yang Y (2015), Yang Y (2015), Yang Y (2015), Yang Y (2015)	5
HDAC2	1	TOP2A	2	affinity chromatography technology	Tsai SC (2000)	1
SNAI1	1	HMG20B	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CSNK2A1	15	RELA	1	affinity chromatography technology, enzymatic study	Wang D (2000), Wang D (2000)	2
KLF5	4	TP53	0	affinity chromatography technology, affinity chromatography technology	Zhu N (2006), Zhu N (2006)	2
RELA	1	PARP1	3	affinity chromatography technology, pull down, pull down, pull down, affinity chromatography technology, affinity chromatography technology	Hassa PO (2001), Hassa PO (2001), Hassa PO (2005), Hassa PO (2005), Hassa PO (2008), Hassa PO (2008)	6
CHD4	22	RBBP4	3	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology	Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Xue Y (1998), Cui S (2011), Cui S (2011), Havugimana PC (2012), Wan C (2015), Hauri S (2016)	9
EED	1	PCGF6	0	affinity chromatography technology	Cao Q (2014)	1
HDAC1	4	TGIF1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Melhuish TA (2000), Melhuish TA (2001), Lo RS (2001)	3
KLF5	4	EP300	36	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Miyamoto S (2003), Matsumura T (2005), Guo P (2009), Guo P (2009), Nagai R (2005)	5
MDM2	2	RELA	1	two hybrid, pull down, affinity chromatography technology, affinity chromatography technology	Wang J (2011), Heyne K (2013), Heyne K (2013), Heyne K (2013)	4
KMT2A	58	SMARCA2	17	affinity chromatography technology	Nakamura T (2002)	1
HDAC1	4	MIER2	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Huttlin EL (2015), Huttlin EL (2017)	3
SIN3A	13	NSD2	9	affinity chromatography technology, affinity chromatography technology	Marango J (2008), Marango J (2008)	2
KDM1A	2	MBD3	4	affinity chromatography technology, affinity chromatography technology, two hybrid	Wang Y (2009), Li Q (2011), Weimann M (2013)	3
ESR1	0	CUL4B	8	affinity chromatography technology, affinity chromatography technology	Ohtake F (2007), Ohtake F (2007)	2
IKZF1	2	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Koipally J (2002), ONeill DW (2000), ONeill DW (2000), Huttlin EL (2017)	4
MYOD1	0	RUNX1	0	affinity chromatography technology, pull down	Philipot O (2010), Philipot O (2010)	2
CTNNB1	30	DDX5	2	affinity chromatography technology, affinity chromatography technology	Sato S (2005), Sato S (2005)	2
CHD4	22	SIN3A	13	affinity chromatography technology	Zhang Y (1998)	1
EED	1	SMARCA2	17	affinity chromatography technology	Cao Q (2014)	1
KDM1A	2	SIN3A	13	affinity chromatography technology	You A (2001)	1
SMAD2	5	SP1	0	affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology	Poncelet AC (2001), Pardali K (2000), Pardali K (2000), Pardali K (2000), Barrasa JI (2011)	5
MTA3	3	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	4
GATAD1	0	ARID4A	3	affinity chromatography technology	Varier RA (2016)	1
CDKN1A	1	HDAC2	1	pull down	Garcia-Wilson E (2005)	1
NR2C1	0	RCOR1	0	affinity chromatography technology	Cui S (2011)	1
NR2C1	0	SIN3A	13	affinity chromatography technology	Cui S (2011)	1
ESR1	0	SFPQ	2	pull down	Nalvarte I (2010)	1
NR3C1	2	EP300	36	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Amat R (2007), Wang W (2012), Kino T (2002)	3
HDAC2	1	RCOR3	0	affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Joshi P (2013)	2
SYK	3	HDAC9	7	affinity chromatography technology, pull down	Wang L (2005), Wang L (2005)	2
FOXK2	9	ING2	0	affinity chromatography technology	Li X (2015)	1
TP73	2	TRIM28	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Satija YK (2016), Satija YK (2016), Satija YK (2016), Satija YK (2016)	4
CTBP1	2	RCOR3	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
FOXK2	9	ARID4A	3	affinity chromatography technology	Li X (2015)	1
HDAC2	1	HMG20A	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Huttlin EL (2017), Rivero S (2015)	5
DDB1	6	TP73	2	affinity chromatography technology, affinity chromatography technology, enzymatic study	Malatesta M (2012), Malatesta M (2012), Malatesta M (2012)	3
MBD3	4	SMARCA4	19	pull down	Yildirim O (2011)	1
CSNK2A1	15	CCDC6	3	enzymatic study	Zhang M (2011)	1
BRMS1	1	NFKB1	2	affinity chromatography technology, affinity chromatography technology	Liu Y (2006), Liu Y (2006)	2
MTA3	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Fujita N (2003), Kwintkiewicz J (2011), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hein MY (2015), Huttlin EL (2017)	8
PML	7	RBL2	5	affinity chromatography technology, affinity chromatography technology, imaging technique	Martin N (2012), Martin N (2012), Martin N (2012)	3
HDAC9	7	CTBP1	2	pull down, affinity chromatography technology	Zhang CL (2001), Merrill JC (2010)	2
KLF5	4	HDAC2	1	affinity chromatography technology, imaging technique	Zheng B (2011), Zheng B (2011)	2
ZMYM2	5	SFPQ	2	affinity chromatography technology, affinity chromatography technology	Kasyapa CS (2005), Kasyapa CS (2005)	2
HDAC1	4	BRMS1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Liu Y (2006), Hurst DR (2006), Bantscheff M (2011), Joshi P (2013), Meehan WJ (2004), Meehan WJ (2004), Hein MY (2015), Huttlin EL (2017)	8
RUNX1	0	KMT2A	58	affinity chromatography technology, affinity chromatography technology	Huang G (2011), Huang G (2011)	2
HMG20B	2	PHF21A	4	biochemical, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2002), Hakimi MA (2002), Hakimi MA (2002), Iwase S (2004), Hakimi MA (2002), Huttlin EL (2015), Huttlin EL (2017)	7
EHMT2	4	MECOM	4	affinity chromatography technology	Spensberger D (2008)	1
SP3	4	RBBP4	3	affinity chromatography technology	Zhang Y (2002)	1
NR2C1	0	PML	7	affinity chromatography technology, imaging technique	Gupta P (2009), Chuang YS (2011)	2
TP53	0	MTA1	3	pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Yao YL (2003), Li DQ (2010), Moon HE (2007), Moon HE (2007), Li DQ (2009), Li DQ (2009)	6
SINHCAF	0	SIN3A	13	affinity chromatography technology	Huttlin EL (2017)	1
CUL4B	8	DDX5	2	affinity chromatography technology	Bennett EJ (2010)	1
TAL1	0	RB1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hu X (2009), Vitelli L (2000), Vitelli L (2000)	3
POU2F1	5	AR	3	pull down	Prefontaine GG (1999)	1
HIST1H3A	3	DNMT3B	3	unspecified method, pull down	Sankaran SM (2016), Sankaran SM (2016)	2
TP53	0	CCND1	1	affinity chromatography technology	Yang P (2016)	1
SP3	4	TP53	0	affinity chromatography technology	Lagger G (2003)	1
BCL3	2	STAT3	0	affinity chromatography technology	Jamaluddin M (2005)	1
NSD2	9	CTNNB1	30	affinity chromatography technology	Toyokawa G (2011)	1
ING1	2	SMARCA4	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kuzmichev A (2002), Kuzmichev A (2002), Kuzmichev A (2002)	3
EED	1	DDX5	2	affinity chromatography technology, affinity chromatography technology	Cao Q (2014), Zhang H (2016)	2
BRMS1	1	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Meehan WJ (2004), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	4
ESR1	0	EZH2	4	pull down, affinity chromatography technology, affinity chromatography technology	Shi B (2007), Shi B (2007), Shi B (2007)	3
NR2C1	0	SMARCA4	19	affinity chromatography technology	Cui S (2011)	1
HIST1H3A	3	RBBP7	1	affinity chromatography technology	Foltz DR (2009)	1
SNAI1	1	RCOR1	0	pull down, x-ray crystallography, unspecified method, affinity chromatography technology, affinity chromatography technology	Lin T (2010), Baron R (2011), Baron R (2011), Huttlin EL (2015), Huttlin EL (2017)	5
MYC	2	RBL1	1	affinity chromatography technology	Beijersbergen RL (1994)	1
CHD3	19	DDX5	2	affinity chromatography technology	Carter CL (2010)	1
PML	7	TOP2B	9	affinity chromatography technology	McNamara S (2008)	1
ESR1	0	CHD4	22	affinity chromatography technology	Tarallo R (2011)	1
SNAI2	0	CHD4	22	affinity chromatography technology	Wu ZQ (2012)	1
PARK7	0	RBBP4	3	affinity chromatography technology	Opsahl JA (2010)	1
KDM5B	27	RBBP7	1	affinity chromatography technology	Li Q (2011)	1
KDM1A	2	HIST1H3A	3	enzymatic study, unspecified method, enzymatic study, enzymatic study, enzymatic study, enzymatic study	Chen Y (2006), Forneris F (2005), Shi YJ (2005), Lee MG (2005), Metzger E (2010), Lin Y (2010)	6
FOXK2	9	SAP30L	0	affinity chromatography technology	Li X (2015)	1
FOXK2	9	MTA1	3	affinity chromatography technology, affinity chromatography technology, biochemical	Shan L (2016), Shan L (2016), Shan L (2016)	3
BRMS1	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hurst DR (2006), Bantscheff M (2011), Joshi P (2013), Meehan WJ (2004), Meehan WJ (2004)	5
HDAC2	1	PPARD	4	affinity chromatography technology, imaging technique	Shi Y (2002), Chen TC (2014)	2
NFKB1	2	CTNNB1	30	imaging technique, affinity chromatography technology, imaging technique	Kim JH (2005), Kim JH (2005), Chen TC (2014)	3
IKZF1	2	NCOR2	12	affinity chromatography technology	Koipally J (2002)	1
ESR1	0	DDX17	2	two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Fujita T (2003), Mooney SM (2010), Tarallo R (2011), Mooney SM (2010), Nalvarte I (2010)	5
MECP2	36	SP3	4	affinity chromatography technology, affinity chromatography technology	Hwang CK (2010), Hwang CK (2010)	2
SMAD2	5	GATAD2B	15	two hybrid	Colland F (2004)	1
TGIF1	1	PML	7	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Faresse N (2008), Seo SR (2006), Seo SR (2006), Seo SR (2006)	4
HIF1A	1	TRIM28	1	affinity chromatography technology	Cai Q (2013)	1
MDM2	2	EED	1	affinity chromatography technology	Wienken M (2016)	1
STAT3	0	HDAC2	1	affinity chromatography technology, imaging technique	Yuan ZL (2005), Chen TC (2014)	2
HIST1H2BA	0	HDAC1	4	pull down, affinity chromatography technology, affinity chromatography technology	Li X (2014), Huttlin EL (2015), Huttlin EL (2017)	3
SINHCAF	0	SUDS3	3	affinity chromatography technology	Huttlin EL (2017)	1
HMG20A	0	PHF21A	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Hein MY (2015), Huttlin EL (2017), Boldt K (2016), Rivero S (2015)	4
EZH2	4	DNMT3B	3	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vire E (2006), Vire E (2006), Vire E (2006), OHagan HM (2011), Gong C (2015)	5
DNMT3A	17	HDAC1	4	pull down, pull down, affinity chromatography technology, affinity chromatography technology	Fuks F (2001), Fuks F (2001), Fuks F (2001), Hervouet E (2009)	4
DNMT1	5	UHRF2	1	affinity chromatography technology, affinity chromatography technology	Zhang J (2011), Lai M (2016)	2
TP53	0	CTBP1	2	affinity chromatography technology, affinity chromatography technology	Jin W (2008), Jin W (2008)	2
DNMT3A	17	MYC	2	pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Brenner C (2005), Brenner C (2005), Brenner C (2005), Brenner C (2005), Hervouet E (2009)	5
RBL2	5	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ferreira R (1998), Bouzahzah B (2000), Bouzahzah B (2000), Iavarone A (1999)	4
DNMT3L	2	TP53	0	pull down	Pacaud R (2014)	1
SP3	4	PPP1CC	2	affinity chromatography technology	Valin A (2013)	1
RUNX1T1	1	GSE1	14	two hybrid	Rolland T (2014)	1
TOP2A	2	RB1	2	affinity chromatography technology, affinity chromatography technology	Bhat UG (1999), Bhat UG (1999)	2
CTBP1	2	RB1	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
BCL6	6	ZMYND8	5	affinity chromatography technology	Miles RR (2005)	1
GATAD1	0	SAP130	2	affinity chromatography technology	Varier RA (2016)	1
EZH2	4	CTNNB1	30	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Li X (2009), Li X (2009), Shi B (2007), Shi B (2007), Shi B (2007)	5
AR	3	SMARCA4	19	affinity chromatography technology, two hybrid, affinity chromatography technology, bioid	Wang Q (2004), van de Wijngaart DJ (2009), Dai Y (2008), Lempiaeinen JK (2017)	4
CDKN1A	1	EP300	36	pull down, affinity chromatography technology	Cazzalini O (2008), Cazzalini O (2008)	2
KDM5B	27	MBD3	4	affinity chromatography technology, pull down	Li Q (2011), Li Q (2011)	2
TRIM28	1	SMARCAD1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Seki Y (2010), Rowbotham SP (2011), Rowbotham SP (2011), Rowbotham SP (2011), Rowbotham SP (2011)	5
DDB1	6	SUDS3	3	affinity chromatography technology, affinity chromatography technology	Ji Q (2014), Ji Q (2014)	2
PPARG	0	SMARCA4	19	affinity chromatography technology	Debril MB (2004)	1
PARP1	3	PCNA	0	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, pull down	Frouin I (2003), Cazzalini O (2010), Cazzalini O (2010), Lee CH (2010), Pozo FM (2011), Sekimoto T (2010)	6
GATAD1	0	MORF4L1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Huttlin EL (2015), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	5
KDM5B	27	KDM1A	2	affinity chromatography technology, pull down	Li Q (2011), Li Q (2011)	2
SIN3A	13	PHB	0	affinity chromatography technology	Wang S (2002)	1
DNMT3B	3	MTA2	1	affinity chromatography technology	Cai Y (2014)	1
KDM1A	2	RCOR3	0	affinity chromatography technology, two hybrid, biochemical	Bantscheff M (2011), Weimann M (2013), Wan C (2015)	3
RBBP4	3	RBBP7	1	biochemical, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Havugimana PC (2012), Kristensen AR (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	7
YY1	7	EZH2	4	affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology	Caretti G (2004), Caretti G (2004), Satijn DP (2001), Satijn DP (2001)	4
ARID4B	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Fleischer TC (2003), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	4
MIER1	2	CREBBP	29	pull down	Blackmore TM (2008)	1
DNMT1	5	RUNX1	0	affinity chromatography technology, imaging technique, two hybrid	Liu S (2005), Liu S (2005), Liu S (2005)	3
EZH2	4	RBL2	5	affinity chromatography technology, affinity chromatography technology, pull down	Tonini T (2004), Tonini T (2004), Tonini T (2004)	3
CSNK2A1	15	UBTF	8	enzymatic study, pull down	Voit R (1995), Voit R (1995)	2
PML	7	E2F4	0	affinity chromatography technology, affinity chromatography technology	Martin N (2012), Martin N (2012)	2
SAP130	2	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Fleischer TC (2003), Xue Y (1998), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	5
NR3C1	2	STAT3	0	pull down, affinity chromatography technology, affinity chromatography technology	Lerner L (2003), Zhang Z (1997), Wang W (2015)	3
MTA3	3	MBD3	4	affinity chromatography technology, biochemical	Fujita N (2003), Wan C (2015)	2
CDYL	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Caron C (2003), Caron C (2003), Caron C (2003), Mulligan P (2008), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	7
HIST1H4A	0	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method, affinity chromatography technology	Saade E (2009), Verreault A (1996), Huttlin EL (2017), Millard CJ (2016), Kleiner RE (2018)	5
DDX5	2	SMARCA4	19	affinity chromatography technology, affinity chromatography technology	Caretti G (2006), Caretti G (2006)	2
TP53	0	RUNX2	2	affinity chromatography technology, affinity chromatography technology	Ozaki T (2013), Ozaki T (2013)	2
HIF1A	1	SIN3A	13	affinity chromatography technology	Cai Q (2013)	1
RUVBL2	4	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kim JH (2006), Rashid S (2009), Lee JS (2010), Lee JS (2010), Lee JS (2010)	5
FOXK2	9	BRMS1	1	affinity chromatography technology	Li X (2015)	1
RB1	2	CDKN1A	1	affinity chromatography technology, pull down	Nakanishi M (1999), Nakanishi M (1999)	2
MYC	2	SMAD2	5	affinity chromatography technology, pull down, two hybrid, fluorescent resonance energy transfe	Feng XH (2002), Feng XH (2002), Feng XH (2002), Ivanov AA (2017)	4
HIF1A	1	STAT3	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jung JE (2008), Jung JE (2008), Gray MJ (2005), Gray MJ (2005), Pawlus MR (2013), Pawlus MR (2013)	6
HDAC1	4	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yao YL (2003), Bantscheff M (2011), Joshi P (2013)	3
EP300	36	RUNX2	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Lee HW (2006), Jeon EJ (2006), Jeon EJ (2006), Jun JH (2010)	4
RBBP4	3	PWWP2A	5	affinity chromatography technology	Hauri S (2016)	1
STAT3	0	DAXX	5	affinity chromatography technology	Muromoto R (2006)	1
NCOR2	12	EP300	36	affinity chromatography technology	Cowger JJ (2006)	1
NSD2	9	AR	3	affinity chromatography technology, two hybrid, pull down, affinity chromatography technology	Kang HB (2009), Kang HB (2009), Kang HB (2009), Kang HB (2009)	4
UHRF2	1	PCNA	0	far western blotting, x-ray crystallography, unspecified method, affinity chromatography technology	Mori T (2011), Chen W (2017), Chen W (2017), Lai M (2016)	4
CHFR	5	SIN3A	13	affinity chromatography technology	Oh YM (2009)	1
SAP30	1	FOXK2	9	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Hein MY (2015), Li X (2015), Shan L (2016), Shan L (2016), Shan L (2016)	5
SMARCA4	19	RCOR1	0	affinity chromatography technology	Battaglioli E (2002)	1
EHMT2	4	UHRF2	1	affinity chromatography technology, affinity chromatography technology	Zhang J (2011), Lai M (2016)	2
NFKB1	2	NCOR2	12	imaging technique	Hoberg JE (2004)	1
DNMT3B	3	HDAC1	4	biochemical, pull down, affinity chromatography technology, pull down, affinity chromatography technology	Geiman TM (2004), Suzuki M (2006), Geiman TM (2004), Geiman TM (2004), Cai Y (2014)	5
CEBPA	0	SMARCA2	17	affinity chromatography technology, pull down, affinity chromatography technology	Inayoshi Y (2006), Inayoshi Y (2006), Wang GL (2004)	3
MTA1	3	PARK7	0	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Reddy SD (2011), Reddy SD (2011), Reddy SD (2011), Opsahl JA (2010)	4
EZH2	4	EHMT2	4	affinity chromatography technology	Hein MY (2015)	1
DCAF1	5	HIST1H3A	3	pull down, pull down	Kim K (2012), Kim K (2012)	2
MAGEB2	0	HDAC1	4	pull down, affinity chromatography technology, affinity chromatography technology	Peche LY (2015), Peche LY (2015), Peche LY (2015)	3
CTNNB1	30	TOP2A	2	affinity chromatography technology, affinity chromatography technology	Sato S (2005), Sato S (2005)	2
DNMT3A	17	DNMT3B	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ling Y (2004), Lehnertz B (2003), Kim GD (2002), Kim GD (2002), Kashiwagi K (2011), Kashiwagi K (2011), Huttlin EL (2017)	7
RB1	2	HDAC1	4	affinity chromatography technology, pull down, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology	Dick FA (2000), Fuks F (2000), Puri PL (2001), Puri PL (2001), Wang S (2002), Luo RX (1998), Luo RX (1998), Lai A (1999), Lai A (1999), Ferreira R (1998), Kimura H (2003), Qiu Z (2008), Fedele M (2006), Brown VD (2002), Khan MM (2001), Dasgupta P (2004), Chang YC (2001), Dahiya A (2000), Zhang HS (2000), Tokitou F (1999), Nguyen DX (2004), Takaki T (2004), Magnaghi-Jaulin L (1998), Magnaghi-Jaulin L (1998), Brehm A (1998), Brehm A (1998), Brehm A (1998), Sun JM (2007), Fan LX (2012), Harbour JW (1999), Brehm A (1999), Joshi P (2013), Chen TT (2000), Chen TT (2000), Chen TT (2000), Chen TT (2000)	36
HDAC2	1	TOP2B	9	affinity chromatography technology, pull down	Tsai SC (2000), Tsai SC (2000)	2
PML	7	CTNNB1	30	affinity chromatography technology, pull down, affinity chromatography technology	Satow R (2012), Satow R (2012), Shtutman M (2002)	3
TP53	0	EP300	36	pull down, genetic interference, pull down, enzymatic study, pull down, pull down, affinity chromatography technology, biochemical, enzymatic study, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, x-ray crystallography, pull down, imaging technique, affinity chromatography technology, enzymatic study, affinity chromatography technology, x-ray crystallography, enzymatic study, enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, unspecified method, affinity chromatography technology, enzymatic study, unspecified method, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, pull down, enzymatic study, enzymatic study, x-ray crystallography, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, unspecified method	An W (2004), Pastorcic M (2000), Livengood JA (2002), Livengood JA (2002), Grossman SR (1998), Grossman SR (1998), Grossman SR (1998), Grossman SR (1998), Tang Y (2008), Wang H (2008), Valbuena A (2008), Shi D (2009), Vega FM (2004), Finlan L (2004), Groenroos E (2004), Zhao Y (2006), Roe JS (2006), Pedeux R (2005), Sekaric P (2007), Pan X (2009), Tang Y (2006), Sen GS (2011), Li Y (2012), Li Y (2012), Gillotin S (2010), Grossman SR (2003), Issaeva N (2004), Kitagawa M (2008), Sabbatini P (2002), Burge S (2009), Zilfou JT (2001), Issaeva N (2004), Issaeva N (2004), Feng H (2009), Feng H (2009), Lill NL (1997), Dornan D (2004), Dornan D (2004), Di Agostino S (2006), Wells M (2008), Fath DM (2006), Kobet E (2000), Costanzo A (2002), Kumazawa T (2011), Borger DR (2006), Cui D (2013), Borger DR (2006), Lee SJ (2013), Tang HY (2006), Lin C (2011), Choi WI (2014), Ding G (2013), Kim MK (2013), Ali A (2013), Wu G (2014), Mizuguchi Y (2012), Sinha S (2012), Sinha S (2012), Her YR (2013), Her YR (2013), Wu SY (2009), Wu SY (2009), Liu L (1999), Sakaguchi K (1998), Harrod R (2003), Gu W (1997), Teufel DP (2007), Mantovani F (2007), Mantovani F (2007), Dornan D (2003), Dornan D (2003), Dornan D (2003), Dornan D (2003), Dornan D (2003), MacPartlin M (2005), Mujtaba S (2004), Wang YH (2003), Chen H (1999), Tang Z (2013), Graczyk A (2013), Graczyk A (2013), Chan HM (2001), Thomas MC (2005), Miller Jenkins LM (2015), Miller Jenkins LM (2015), Koh DI (2014), Koh DI (2014), Koh DI (2014), Li H (2015), Chen LF (2005), Shi D (2016), Wright DG (2016), Zhang X (2016), Procopio MG (2015), Tong Q (2015)	95
NR3C1	2	SMARCA2	17	affinity chromatography technology	Bilodeau S (2006)	1
HIST1H3A	3	DNTTIP1	0	bioid	Lambert JP (2015)	1
HMG20A	0	GSE1	14	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Huttlin EL (2017)	2
E4F1	3	EHMT2	4	two hybrid	Rual JF (2005)	1
CDKN1A	1	PARP1	3	pull down, pull down, affinity chromatography technology, affinity chromatography technology	Frouin I (2003), Cazzalini O (2010), Cazzalini O (2010), Lee CH (2010)	4
EED	1	RBBP4	3	biochemical, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Pasini D (2004), Cao R (2004), Hein MY (2015), Hauri S (2016), Hauri S (2016)	5
DAXX	5	UBTF	8	affinity chromatography technology	Hein MY (2015)	1
UHRF1	3	UHRF2	1	affinity chromatography technology	Ma H (2012)	1
SP1	0	RB1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Singh J (2002), Chang YC (2001), Opitz OG (2000)	3
HIST1H3A	3	WDR5	2	affinity chromatography technology, pull down, x-ray crystallography, x-ray crystallography, x-ray crystallography, x-ray crystallography, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Higa LA (2006), Higa LA (2006), Schuetz A (2006), Couture JF (2006), Ruthenburg AJ (2006), Han Z (2006), Wysocka J (2005), Wysocka J (2005), Wysocka J (2005), Wysocka J (2005), Bailey JK (2015)	11
AR	3	NCOR2	12	two hybrid, pull down, imaging technique, two hybrid, two hybrid, affinity chromatography technology, pull down, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, bioid	Liao G (2003), Liao G (2003), Liao G (2003), Song LN (2004), Dotzlaw H (2002), Dotzlaw H (2002), Dotzlaw H (2002), Liao G (2003), Dotzlaw H (2003), Cui J (2011), Li Y (2012), Li Y (2012), Moehren U (2007), Lempiaeinen JK (2017)	14
CEBPD	0	CREBBP	29	pull down	Kovacs KA (2003)	1
CTNNB1	30	BCL6	6	pull down	Kotlyar M (2015)	1
HDAC1	4	TOP2B	9	affinity chromatography technology, pull down, pull down, two hybrid	Tsai SC (2000), Tsai SC (2000), Johnson CA (2001), Johnson CA (2001)	4
HDAC1	4	DAXX	5	far western blotting, pull down, affinity chromatography technology	Li H (2000), Li H (2000), Li H (2000)	3
CTBP1	2	IKZF1	2	pull down, affinity chromatography technology, two hybrid, two hybrid, two hybrid	Koipally J (2000), Koipally J (2000), Vinayagam A (2011), Corominas R (2014), Rolland T (2014)	5
MYC	2	RUVBL2	4	biochemical, affinity chromatography technology, affinity chromatography technology, pull down	Park J (2002), Li W (2010), Koch HB (2007), Liu X (2003)	4
SMARCA2	17	CHD3	19	affinity chromatography technology	Nakamura T (2002)	1
EED	1	NONO	3	affinity chromatography technology	Cao Q (2014)	1
PCGF6	0	TCP1	0	affinity chromatography technology	Hauri S (2016)	1
HIST1H3A	3	CDYL	1	affinity chromatography technology, affinity chromatography technology	Franz H (2009), Franz H (2009)	2
SNAI1	1	CSNK2A1	15	affinity chromatography technology	Liu T (2017)	1
RCOR1	0	HMG20B	2	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2002), Hakimi MA (2002), Hakimi MA (2002), Hakimi MA (2002), Huttlin EL (2015), Huttlin EL (2017)	6
PPP1CC	2	RUVBL2	4	affinity chromatography technology, bioid	Yadav L (2017), Yadav L (2017)	2
CEBPA	0	SMARCA4	19	affinity chromatography technology, pull down	Inayoshi Y (2006), Inayoshi Y (2006)	2
HELLS	1	DNMT1	5	affinity chromatography technology, pull down	Myant K (2008), Myant K (2008)	2
CTNNB1	30	ESR1	0	affinity chromatography technology	Kouzmenko AP (2004)	1
DNMT3L	2	CREB1	1	pull down	Pacaud R (2014)	1
GATAD1	0	KDM5A	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Hein MY (2015), Varier RA (2016), Varier RA (2016), Varier RA (2016)	5
HIST1H3A	3	EHMT2	4	pull down, enzymatic study, enzymatic study	Chin HG (2005), Chin HG (2005), Huang J (2010)	3
HIF1A	1	BANP	1	affinity chromatography technology	Behrends C (2010)	1
CHD5	12	MBD2	1	affinity chromatography technology	Quan J (2014)	1
PARK7	0	AR	3	two hybrid, affinity chromatography technology, affinity chromatography technology	Tillman JE (2007), Tillman JE (2007), Tillman JE (2007)	3
SNAI1	1	GSE1	14	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
HDAC9	7	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Zhou X (2000), Morrison BE (2006), Sparrow DB (1999), Sparrow DB (1999)	4
MORF4L1	1	RUVBL2	4	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Havugimana PC (2012), Huttlin EL (2017)	4
NCOR2	12	SMARCA4	19	biochemical	Li J (2000)	1
ESR1	0	MYOD1	0	affinity chromatography technology, affinity chromatography technology	Jin W (2008), Jin W (2008)	2
DNMT3B	3	RBBP7	1	affinity chromatography technology	Cai Y (2014)	1
CSNK2A1	15	HDAC1	4	enzymatic study, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology	Pflum MK (2001), Cai R (2001), Sun JM (2007), Zhang M (2011), Joshi P (2013)	5
FOXK2	9	H2AFY	1	affinity chromatography technology	Li X (2015)	1
HMG20A	0	RCOR1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Huttlin EL (2017), Boldt K (2016), Rivero S (2015)	4
ING2	0	SAP30	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Hein MY (2015), Huttlin EL (2017)	3
ZMYND8	5	MTA2	1	affinity chromatography technology	Hein MY (2015)	1
CUL4B	8	DNMT3B	3	affinity chromatography technology, affinity chromatography technology, pull down	Yang Y (2015), Yang Y (2015), Yang Y (2015)	3
CHD4	22	CHD5	12	affinity chromatography technology, affinity chromatography technology	Rahman S (2011), Quan J (2014)	2
SIN3A	13	HDAC9	7	affinity chromatography technology, pull down	Koipally J (2002), Petrie K (2003)	2
ZMYND8	5	GATAD2B	15	affinity chromatography technology	Hein MY (2015)	1
PCNA	0	ING2	0	affinity chromatography technology	Larrieu D (2009)	1
SATB1	1	HDAC1	4	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yasui D (2002), Yasui D (2002), Yasui D (2002), Pavan Kumar P (2006), Pavan Kumar P (2006), Kumar PP (2005)	6
SINHCAF	0	ARID4B	1	affinity chromatography technology	Huttlin EL (2017)	1
ING2	0	BRMS1	1	affinity chromatography technology	Huttlin EL (2017)	1
PARP1	3	HDAC1	4	affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study	Hassa PO (2005), Hassa PO (2005), Hang CT (2010), Rajamohan SB (2009)	4
ARID4A	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Lai A (2001), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	4
NCOR2	12	RUNX1T1	1	two hybrid, affinity chromatography technology, pull down, two hybrid, pull down, pull down	Takahashi S (2004), Takahashi S (2004), Zhang J (2001), Gelmetti V (1998), Gelmetti V (1998), Gelmetti V (1998)	6
ZBTB16	4	SIN3B	5	pull down, affinity chromatography technology, affinity chromatography technology, two hybrid	David G (1998), David G (1998), David G (1998), David G (1998)	4
MBD2	1	MTA2	1	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Zhang Y (1999), Feng Q (2001), Feng Q (2001), Humphrey GW (2001), Humphrey GW (2001), Wan C (2015)	6
FOXK2	9	MTA3	3	affinity chromatography technology, affinity chromatography technology, biochemical, pull down	Shan L (2016), Shan L (2016), Shan L (2016), Shan L (2016)	4
EP300	36	PCNA	0	affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study	Hasan S (2001), Hasan S (2001), Hasan S (2001), Hong R (2003), Hong R (2003), Cazzalini O (2008), Cazzalini O (2008), Naryzhny SN (2004), Cazzalini O (2014), Cazzalini O (2014)	10
BHLHE41	0	CEBPA	0	biochemical, biochemical, imaging technique	Matsunaga N (2012), Matsunaga N (2012), Matsunaga N (2012)	3
DDB1	6	RBBP4	3	affinity chromatography technology, affinity chromatography technology	He YJ (2006), Mouysset J (2015)	2
CEBPA	0	ZBTB16	4	pull down, affinity chromatography technology	Girard N (2013), Girard N (2013)	2
MECOM	4	MBD3	4	affinity chromatography technology, affinity chromatography technology, two hybrid, pull down	Spensberger D (2008), Spensberger D (2008), Spensberger D (2008), Spensberger D (2008)	4
RELA	1	PPARG	0	affinity chromatography technology, enzymatic study, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, pull down	Hou Y (2012), Hou Y (2012), Lu X (2013), Chen F (2003), Chen F (2003), Perez A (2008), Jeninga EH (2007)	7
MYC	2	HELLS	1	affinity chromatography technology	Koch HB (2007)	1
NR3C1	2	MDM2	2	affinity chromatography technology	Sengupta S (2001)	1
ESR1	0	FOXK2	9	affinity chromatography technology, affinity chromatography technology, two hybrid, pull down	Liu Y (2015), Liu Y (2015), Liu Y (2015), Liu Y (2015)	4
TRIM28	1	DNMT1	5	affinity chromatography technology, affinity chromatography technology	Quenneville S (2011), Cui S (2011)	2
MTA1	3	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yao YL (2003), Roche AE (2008), Huttlin EL (2015), Huttlin EL (2017), Millard CJ (2016), Hauri S (2016)	6
PML	7	RUNX2	2	affinity chromatography technology	Nguyen LA (2005)	1
NONO	3	SPI1	1	pull down, pull down, affinity chromatography technology	Hallier M (1996), Hallier M (1996), Hallier M (1996)	3
ZBTB16	4	TP53	0	affinity chromatography technology, affinity chromatography technology	Choi WI (2014), Choi WI (2014)	2
PARP1	3	TP53	0	affinity chromatography technology, far western blotting, pull down, affinity chromatography technology, pull down, pull down	Gueven N (2004), Malanga M (1998), Vaziri H (1997), Vaziri H (1997), Wesierska-Gadek J (2003), Simbulan-Rosenthal CM (2003)	6
DNTTIP1	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	5
BAHD1	3	TRIM28	1	affinity chromatography technology, affinity chromatography technology	Lebreton A (2011), Lebreton A (2011)	2
NR3C1	2	DAXX	5	affinity chromatography technology, pull down, two hybrid, affinity chromatography technology, pull down, two hybrid, imaging technique, affinity chromatography technology	Lin DY (2003), Lin DY (2003), Lin DY (2003), Lin DY (2006), Lin DY (2006), Lin DY (2006), Lin DY (2006), Obradovic D (2004)	8
MBD3	4	RBBP7	1	pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1999), Havugimana PC (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	5
HDAC2	1	RREB1	6	affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Joshi P (2013)	2
DNMT1	5	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Cui S (2011), Cui S (2011), Cai Y (2014), Cai Y (2014), Wan C (2015)	5
EHMT2	4	TCP1	0	affinity chromatography technology	Hauri S (2016)	1
EZH2	4	KDM1A	2	two hybrid	Weimann M (2013)	1
EP300	36	DDB1	6	affinity chromatography technology, affinity chromatography technology	Datta A (2001), Rapic-Otrin V (2002)	2
CDK2AP1	1	MBD2	1	affinity chromatography technology, affinity chromatography technology	Spruijt CG (2010), Hein MY (2015)	2
HIST1H3A	3	SMARCA2	17	pull down, pull down	Lavigne M (2009), Lavigne M (2009)	2
SP1	0	STAT3	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Lin S (2006), Zhang Y (2007), Zhang Y (2007), Proietti CJ (2011)	4
ING2	0	SAP30L	0	affinity chromatography technology	Huttlin EL (2017)	1
BRMS1	1	EP300	36	enzymatic study, affinity chromatography technology, pull down	Liu Y (2013), Liu Y (2013), Liu Y (2013)	3
ZBTB16	4	ESR1	0	pull down	Martin PJ (2003)	1
NR3C1	2	TP53	0	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Sengupta S (2000), Sengupta S (2001), Sengupta S (2001), Sengupta S (2001)	4
CREB1	1	CTNNB1	30	affinity chromatography technology	Wang H (2008)	1
PHF21A	4	HDAC1	4	biochemical, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2002), Iwase S (2004), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	5
SIN3A	13	CHD3	19	affinity chromatography technology	Nakamura T (2002)	1
TP53	0	SNAI1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Lim SO (2010), Lim SO (2010), Liu T (2017)	3
MTA1	3	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Yao YL (2003), Xue Y (1998), Cui S (2011), Cui S (2011), Chudnovsky Y (2014), Wan C (2015)	6
NCOR2	12	ZBTB16	4	two hybrid, affinity chromatography technology, pull down, pull down, pull down, two hybrid, affinity chromatography technology, pull down, affinity chromatography technology	Takahashi S (2004), Takahashi S (2004), Wong CW (1998), Hong SH (1997), Hong SH (1997), Hong SH (1997), Melnick A (2002), Puccetti E (2005), Choi WI (2014)	9
DDB1	6	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ji Q (2014), Ji Q (2014), Romani B (2016)	3
SP3	4	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Sun JM (2002), Goto T (2006), Choi HS (2002), Choi HS (2002), Walker GE (2001), Walker GE (2001), Enya K (2008), Wooten-Blanks LG (2007)	8
SNAI2	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Peinado H (2004), Peinado H (2004)	2
CSNK2A1	15	KDM1A	2	affinity chromatography technology	Peng B (2015)	1
SNAI1	1	EP300	36	affinity chromatography technology	Hsu DS (2014)	1
RBBP7	1	BCL11A	14	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	3
BRMS1L	1	RBBP4	3	affinity chromatography technology	Nikolaev AY (2004)	1
EED	1	EHMT2	4	affinity chromatography technology	Cao Q (2014)	1
HDAC1	4	WDR5	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Xu Z (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	5
RBL1	1	KDM5A	6	pull down	Kim YW (1994)	1
HDAC2	1	PML	7	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Wu WS (2001), Morey L (2008), Kraemer OH (2008), Kim YE (2015)	4
PML	7	WDR5	2	affinity chromatography technology	Hein MY (2015)	1
SNAI1	1	HMG20A	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017), Rivero S (2015)	3
HMG20A	0	GATAD2A	3	affinity chromatography technology	Hein MY (2015)	1
TP53	0	TOP2B	9	affinity chromatography technology, pull down	Cowell IG (2000), Cowell IG (2000)	2
SMARCAD1	1	SMARCA4	19	affinity chromatography technology	Rowbotham SP (2011)	1
CREB1	1	MECP2	36	affinity chromatography technology	Li X (2015)	1
MECP2	36	DNMT1	5	affinity chromatography technology, pull down	Kimura H (2003), Kimura H (2003)	2
SNAI2	0	DAXX	5	affinity chromatography technology, affinity chromatography technology	Lin CW (2016), Lin CW (2016)	2
BCL3	2	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jamaluddin M (2005), Viatour P (2004), Viatour P (2004)	3
EHMT2	4	MIER1	2	affinity chromatography technology	Bantscheff M (2011)	1
SIN3B	5	IKZF1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Koipally J (1999), Koipally J (2002), Koipally J (2002)	3
KMT2A	58	RBBP4	3	affinity chromatography technology	Nakamura T (2002)	1
MYC	2	NONO	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method	Koch HB (2007), Agrawal P (2010), Cobbold LC (2008), Cobbold LC (2008)	4
RB1	2	UBTF	8	affinity chromatography technology, affinity chromatography technology, pull down, pull down, pull down, affinity chromatography technology	Hannan KM (2000), Hannan KM (2000), Hannan KM (2000), Hannan KM (2000), Cavanaugh AH (1995), Cavanaugh AH (1995)	6
SMARCA2	17	CREBBP	29	affinity chromatography technology	Zhang Y (2010)	1
DDX17	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Mooney SM (2010), Mooney SM (2010)	2
SMAD2	5	YY1	7	pull down, affinity chromatography technology	Kurisaki K (2003), Brown KA (2008)	2
GSE1	14	RCOR3	0	two hybrid, two hybrid, two hybrid	Rual JF (2005), Venkatesan K (2009), Rolland T (2014)	3
MDM2	2	SNAI2	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jung CH (2013), Lin TY (2016), Lin TY (2016)	3
ZBTB16	4	PARP1	3	enzymatic study	Rho SB (2007)	1
DNMT1	5	MTA2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cai Y (2014), Cai Y (2014), Cai Y (2014)	4
HIST1H4A	0	GATAD2B	15	pull down	Brackertz M (2006)	1
RELA	1	AR	3	genetic interference, genetic interference	Aarnisalo P (1998), Aarnisalo P (1998)	2
PHB2	1	HDAC1	4	affinity chromatography technology, pull down, pull down, affinity chromatography technology, imaging technique	Kurtev V (2004), Kurtev V (2004), Kurtev V (2004), Sun L (2004), Yoshimaru T (2013)	5
SIN3A	13	RUNX1	0	affinity chromatography technology, affinity chromatography technology	Imai Y (2004), Imai Y (2004)	2
KDM1A	2	HMG20A	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Shi YJ (2005), Bantscheff M (2011), Hein MY (2015), Huttlin EL (2017), Boldt K (2016), Rivero S (2015)	6
CEBPA	0	SPI1	1	affinity chromatography technology, pull down	Reddy VA (2002), Trivedi AK (2007)	2
CREBBP	29	CSNK2A1	15	pull down, far western blotting, affinity chromatography technology	Yamaguchi Y (1998), Yamaguchi Y (1998), Jung SY (2005)	3
ARID4A	3	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Lai A (2001), Huttlin EL (2015), Huttlin EL (2017)	3
HDAC2	1	YY1	7	pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Yang WM (1997), Yao YL (2001), Kalenik JL (1997), Glenn DJ (2009), Sun JM (2007)	5
SMAD2	5	MECOM	4	pull down	Alliston T (2005)	1
GATAD1	0	ING1	2	affinity chromatography technology	Varier RA (2016)	1
FOXK2	9	ING1	2	affinity chromatography technology	Li X (2015)	1
DNMT3B	3	UHRF2	1	affinity chromatography technology	Zhang J (2011)	1
PML	7	RELA	1	affinity chromatography technology, affinity chromatography technology	Wu WS (2003), Chen Y (2015)	2
EED	1	YY1	7	affinity chromatography technology, affinity chromatography technology, pull down, two hybrid	Satijn DP (2001), Satijn DP (2001), Satijn DP (2001), Satijn DP (2001)	4
E4F1	3	HDAC1	4	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Colombo R (2003), Colombo R (2003), Colombo R (2003), Ro H (2011)	4
MORF4L1	1	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Huttlin EL (2015), Huttlin EL (2017)	4
HDAC2	1	DAXX	5	far western blotting, affinity chromatography technology	Li H (2000), Hollenbach AD (2002)	2
EZH2	4	DNMT1	5	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vire E (2006), Vire E (2006), Vire E (2006), Xu B (2011), OHagan HM (2011)	5
EED	1	AR	3	affinity chromatography technology	Cao Q (2014)	1
TP53	0	PML	7	affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique	Kurki S (2003), Kurki S (2003), Fogal V (2000), Fogal V (2000), Guo A (2000), Guo A (2000), Insinga A (2004), Chu Y (2011), Li Q (2011), Li Q (2011), Bernassola F (2005), Yang Q (2013), Yang Q (2013), Catalano A (2004), Chen TC (2014)	15
BCL11B	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005), Marban C (2007), Joshi P (2013)	5
HDAC1	4	YY1	7	pull down, affinity chromatography technology, imaging technique, affinity chromatography technology	Yang WM (1997), He Y (2007), He G (2002), Sun JM (2007)	4
KDM5A	6	HDAC2	1	affinity chromatography technology	Hayakawa T (2007)	1
MBD3L1	0	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
SIN3A	13	BRMS1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Hurst DR (2013), Meehan WJ (2004), Meehan WJ (2004)	4
NFKB1	2	PML	7	two hybrid	Wang J (2011)	1
CREBBP	29	PCNA	0	affinity chromatography technology, pull down, enzymatic study	Cazzalini O (2014), Cazzalini O (2014), Cazzalini O (2014)	3
SMAD2	5	RUNX2	2	affinity chromatography technology	Hanai J (1999)	1
IKZF1	2	MTA3	3	affinity chromatography technology	Huttlin EL (2017)	1
ESR1	0	HDAC9	7	pull down	van Rooij E (2010)	1
DAXX	5	TOP2A	2	affinity chromatography technology	Hein MY (2015)	1
DMAP1	2	MYC	2	affinity chromatography technology	Kim J (2010)	1
BRMS1L	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Nikolaev AY (2004), Nikolaev AY (2004), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	5
HDAC2	1	RB1	2	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Lai A (1999), Lai A (1999), Chan HM (2001), Khan MM (2001), Sun JM (2007)	5
CTNNB1	30	PARP1	3	affinity chromatography technology	Sato S (2005)	1
CDK2AP1	1	CHD4	22	affinity chromatography technology	Hein MY (2015)	1
TP53	0	SP1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down	Borellini F (1993), Jin W (2008), Dhar SK (2006), Lagger G (2003), Lagger G (2003), Lagger G (2003), Lagger G (2003), Sengupta S (2005), Sengupta S (2005), Lin RK (2010), Kim HA (2011), Sawaya BE (1998), St Clair S (2004), Innocente SA (2005), Innocente SA (2005), Ohlsson C (1998), Kong X (2013), Bocangel D (2009), Bocangel D (2009)	19
NCOR2	12	CDKN1A	1	affinity chromatography technology	Thorne JL (2011)	1
BANP	1	NFKB1	2	affinity chromatography technology	Singh K (2009)	1
SINHCAF	0	BRMS1	1	affinity chromatography technology	Huttlin EL (2017)	1
NFKB1	2	YY1	7	two hybrid	Wang J (2011)	1
NR3C1	2	NR2F2	4	two hybrid, pull down, pull down, affinity chromatography technology, affinity chromatography technology	De Martino MU (2004), De Martino MU (2004), De Martino MU (2004), De Martino MU (2004), De Martino MU (2004)	5
AR	3	SMARCA2	17	two hybrid, affinity chromatography technology, bioid	van de Wijngaart DJ (2009), Dai Y (2008), Lempiaeinen JK (2017)	3
RUNX1	0	CREBBP	29	affinity chromatography technology	Nguyen LA (2005)	1
DNMT3L	2	DNMT3B	3	affinity chromatography technology, pull down, two hybrid, affinity chromatography technology, affinity chromatography technology, pull down, pull down, imaging technique	Hata K (2002), Ooi SK (2007), Margot JB (2003), Suetake I (2004), Suetake I (2004), Suetake I (2004), Pacaud R (2014), Pacaud R (2014)	8
SMARCAD1	1	MTA2	1	affinity chromatography technology	Rowbotham SP (2011)	1
CREBBP	29	SP1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Goto T (2006), Leclerc GJ (2010), Chuang JY (2012), Guo W (2014)	4
HIST1H3A	3	HIST1H4A	0	affinity chromatography technology, pull down, affinity chromatography technology, imaging technique, affinity chromatography technology, pull down	Tagami H (2004), Shiio Y (2003), Zippo A (2009), Soldi M (2013), Klement K (2014), Sato K (2012)	6
RB1	2	EP300	36	affinity chromatography technology, affinity chromatography technology, enzymatic study	Iyer NG (2007), Iyer NG (2007), Chan HM (2001)	3
MTA2	1	CHD3	19	biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical	Zhang Y (1999), Feng Q (2001), Wang Y (2009), Havugimana PC (2012), Wan C (2015)	5
SAP30L	0	SIN3A	13	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Viiri KM (2006), Viiri KM (2006), Viiri KM (2006), Korkeamaeki H (2008), Bantscheff M (2011)	5
FOXK2	9	SIN3A	13	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, pull down	Li X (2015), Ji Z (2014), Ji Z (2014), Shan L (2016), Shan L (2016), Shan L (2016), Shan L (2016)	7
BCL11A	14	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cismasiu VB (2005), Joshi P (2013), Huttlin EL (2017)	3
SAP30	1	ARID4A	3	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Lai A (2001), Lai A (2001), Suryadinata R (2011), Suryadinata R (2011), Hein MY (2015)	5
HIF1A	1	SMARCA4	19	imaging technique	Wang F (2004)	1
PPARG	0	MDM2	2	affinity chromatography technology	Xu Y (2016)	1
SMARCAD1	1	PARP1	3	affinity chromatography technology, affinity chromatography technology	Rowbotham SP (2011), Rowbotham SP (2011)	2
APPL1	1	HDAC2	1	affinity chromatography technology, pull down, enzymatic study, affinity chromatography technology	Banach-Orlowska M (2009), Banach-Orlowska M (2009), Banach-Orlowska M (2009), Joshi P (2013)	4
SIN3A	13	CSNK2A1	15	affinity chromatography technology, affinity chromatography technology, biochemical, biochemical	Sun JM (2007), Sun JM (2007), Havugimana PC (2012), Wan C (2015)	4
SIN3B	5	NSD2	9	affinity chromatography technology, affinity chromatography technology	Todoerti K (2005), Todoerti K (2005)	2
BCL3	2	NFKB1	2	affinity chromatography technology, imaging technique, pull down, biochemical, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Thornburg NJ (2003), Thornburg NJ (2003), Naumann M (1993), Naumann M (1993), Naumann M (1993), Heissmeyer V (1999), Keutgens A (2010), Keutgens A (2010), Kim JH (2005), Choi HJ (2010)	10
HUS1	1	PCNA	0	two hybrid, two hybrid, affinity chromatography technology	Komatsu K (2000), Komatsu K (2000), Komatsu K (2000)	3
EP300	36	HIST1H3A	3	enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, pull down, enzymatic study, enzymatic study, pull down, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, pull down, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, pull down, enzymatic study, affinity chromatography technology, enzymatic study, enzymatic study	Liu B (2009), Brackertz M (2006), Faiola F (2005), Daujat S (2002), Kalkhoven E (2002), Seo SB (2002), Kim JH (2005), Bordoli L (2001), Kim MY (2001), Kutney SN (2004), Wang F (2010), Loven MA (2004), Kiernan RE (1999), Wong K (2005), Ogryzko VV (1996), Yamaguchi Y (2004), Furumatsu T (2005), An W (2002), Delvecchio M (2013), Delvecchio M (2013), Tropberger P (2013), Das C (2009), Shimura M (2011), Ji A (2003), Fu M (2005), Suganuma T (2002), Tang Z (2013), Kim JH (2006), Lopes da Rosa J (2013), Li X (2014), Wang YL (2008), Du C (2017), Yi P (2017), Wan W (2017)	34
SMARCAD1	1	TOP2A	2	affinity chromatography technology	Rowbotham SP (2011)	1
UHRF2	1	EED	1	affinity chromatography technology	Lai M (2016)	1
FOXK2	9	MTA2	1	affinity chromatography technology, affinity chromatography technology, biochemical	Shan L (2016), Shan L (2016), Shan L (2016)	3
HDAC2	1	KDM1A	2	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, genetic interference	Hakimi MA (2002), Hakimi MA (2003), Hakimi MA (2003), Hakimi MA (2003), Tong JK (1998), Lee MG (2005), Humphrey GW (2001), Humphrey GW (2001), Zibetti C (2010), Wang Y (2009), Li Q (2011), Cui S (2011), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Wong AS (2016)	17
KDM1A	2	TP53	0	affinity chromatography technology, pull down, affinity chromatography technology, pull down, pull down, affinity chromatography technology, enzymatic study	Tsai WW (2008), Tsai WW (2008), Huang J (2007), Huang J (2007), Huang J (2007), Huang J (2007), Huang J (2007)	7
SAP30	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, pull down, pull down, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huang NE (2003), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Zhang Y (1999), Zhang Y (1999), Swanson KA (2004), Yochum GS (2001), Kuzmichev A (2002), Kuzmichev A (2002), Viiri KM (2006), Binda O (2008), Lai A (2001), Skowyra D (2001), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Xue Y (1998), Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Hein MY (2015), Huttlin EL (2017)	24
MDM2	2	MTA1	3	affinity chromatography technology, affinity chromatography technology	Li DQ (2009), Li DQ (2009)	2
CREBBP	29	TP53	0	enzymatic study, pull down, genetic interference, pull down, enzymatic study, fluorescent resonance energy transfe, enzymatic study, affinity chromatography technology, imaging technique, pull down, pull down, pull down, pull down, pull down, enzymatic study, pull down, affinity chromatography technology, unspecified method, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, x-ray crystallography, pull down, affinity chromatography technology, enzymatic study, enzymatic study, pull down, x-ray crystallography, x-ray crystallography, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down	Ito A (2002), Livengood JA (2002), Livengood JA (2002), Giebler HA (2000), Tang Y (2008), Jenkins LM (2009), Shi D (2009), Zhao Y (2006), Saifudeen Z (2005), Scolnick DM (1997), Scolnick DM (1997), Gu W (1997), Gu W (1997), Matsuda S (2004), Pasqualucci L (2011), Lee SK (1999), Dai C (2011), Lee CW (2010), Ferreon JC (2009), Ruas JL (2010), Ruas JL (2010), Huang WC (2007), Huang WC (2007), Mujtaba S (2004), Mujtaba S (2004), Mujtaba S (2004), Mujtaba S (2004), Col E (2002), Jansma AL (2014), Jansma AL (2014), Krois AS (2016), Hasegawa K (2008), Huang X (2013), Huang X (2013), Piskacek M (2016)	35
MYC	2	TOP2A	2	affinity chromatography technology	Koch HB (2007)	1
SAP30	1	MTA2	1	biochemical	Zhang Y (1999)	1
PCGF6	0	CSNK2A1	15	affinity chromatography technology	Huttlin EL (2017)	1
HDAC2	1	ZMYM2	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2003), Gocke CB (2008), Bantscheff M (2011), Joshi P (2013)	4
RERE	9	ZMYND8	5	two hybrid	Lim J (2006)	1
TXNIP	2	MBD3	4	affinity chromatography technology	Huttlin EL (2017)	1
ZBTB2	1	SP1	0	affinity chromatography technology, affinity chromatography technology, pull down	Kim MY (2015), Kim MY (2015), Kim MY (2015)	3
CREB1	1	RBBP4	3	two hybrid	Zhang Q (2000)	1
NR0B2	1	MDM2	2	affinity chromatography technology, affinity chromatography technology, imaging technique	Yang Z (2012), Yang Z (2012), Yang Z (2012)	3
SIN3B	5	EMSY	3	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Varier RA (2016)	2
SUDS3	3	SIN3B	5	two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Alland L (2002), Alland L (2002), Alland L (2002), Huttlin EL (2015), Huttlin EL (2017)	5
RBL2	5	RBL1	1	affinity chromatography technology	Litovchick L (2007)	1
KLF5	4	HDAC1	4	affinity chromatography technology, pull down, pull down	Matsumura T (2005), Matsumura T (2005), Matsumura T (2005)	3
RUNX1	0	TLE1	6	two hybrid, far western blotting	Levanon D (1998), Levanon D (1998)	2
RCOR1	0	ZNF217	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	You A (2001), Banck MS (2009), Banck MS (2009), Cowger JJ (2007), Thillainadesan G (2008), Kuppuswamy M (2008)	6
NR2C1	0	TRIM28	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011), Cui S (2011)	3
DNTTIP1	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013)	3
CTNNB1	30	AR	3	pull down, two hybrid, two hybrid, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down	Yang F (2002), Yang F (2002), Masiello D (2004), Song LN (2004), Amir AL (2003), Amir AL (2003), Mulholland DJ (2003), Mulholland DJ (2003), Pawlowski JE (2002), Mulholland DJ (2003), Levy L (2004)	11
HIST1H3A	3	CHD3	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Wysocka J (2006), Nishioka K (2002), Klement K (2014)	3
MBD3	4	MTA1	3	pull down, affinity chromatography technology, biochemical	Yildirim O (2011), Cui S (2011), Wan C (2015)	3
RB1	2	KDM5A	6	affinity chromatography technology, pull down, affinity chromatography technology, two hybrid, affinity chromatography technology	Chan SW (2001), Kim YW (1994), Kim YW (1994), Benevolenskaya EV (2005), Benevolenskaya EV (2005)	5
HDAC1	4	EHMT2	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	3
CSNK2A1	15	CHD4	22	enzymatic study	Zhang M (2011)	1
TOP2A	2	CSNK2A1	15	affinity chromatography technology, enzymatic study, biochemical	Chen MC (2011), Zhang M (2011), Wan C (2015)	3
CREB1	1	SMARCA4	19	affinity chromatography technology	Yang Y (2006)	1
PPARG	0	NR0B2	1	affinity chromatography technology, pull down, unspecified method	Nishizawa H (2002), Nishizawa H (2002), Koppen A (2009)	3
KDM5B	27	RBBP4	3	affinity chromatography technology	Li Q (2011)	1
PARP1	3	POU2F1	5	far western blotting, pull down, two hybrid	Nie J (1998), Nie J (1998), Nie J (1998)	3
PARP1	3	TOP2B	9	affinity chromatography technology	Ju BG (2006)	1
MBD4	1	HDAC1	4	two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, two hybrid	Kondo E (2005), Kondo E (2005), Kondo E (2005), Kondo E (2005), Kondo E (2005)	5
MYC	2	SMARCA2	17	pull down	Pal S (2003)	1
NR3C1	2	KDM5A	6	pull down	Chan SW (2001)	1
EMSY	3	RBBP7	1	affinity chromatography technology	Varier RA (2016)	1
BANP	1	PML	7	affinity chromatography technology, pull down, affinity chromatography technology	Sinha S (2010), Sinha S (2010), Sen GS (2011)	3
PPP1CC	2	TP53	0	affinity chromatography technology	Flores-Delgado G (2007)	1
ING2	0	SMAD2	5	affinity chromatography technology	Sarker KP (2008)	1
SAP30L	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Viiri KM (2006), Bantscheff M (2011)	2
HIF1A	1	SMARCA2	17	imaging technique	Wang F (2004)	1
CEBPA	0	PARP1	3	affinity chromatography technology, pull down, affinity chromatography technology	Yin H (2006), Yin H (2006), Yin H (2006)	3
BANP	1	HDAC1	4	imaging technique, affinity chromatography technology, imaging technique	Sinha S (2010), Adhikary A (2014), Adhikary A (2014)	3
MBD2	1	GATAD2A	3	affinity chromatography technology, pull down, pull down, biochemical, affinity chromatography technology	Brackertz M (2002), Brackertz M (2002), Brackertz M (2006), Wan C (2015), Huttlin EL (2017)	5
APPL1	1	AR	3	affinity chromatography technology	Yang L (2003)	1
MECP2	36	YY1	7	pull down, far western blotting, affinity chromatography technology	Forlani G (2010), Forlani G (2010), Forlani G (2010)	3
WDR5	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Hauri S (2016)	2
EZH2	4	PPARG	0	affinity chromatography technology	Pancione M (2010)	1
EP300	36	ING1	2	affinity chromatography technology	Vieyra D (2002)	1
MDM2	2	YY1	7	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Sui G (2004), Sui G (2004), Sui G (2004), Dolezelova P (2012)	4
MTA2	1	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Yao YL (2003), Yao YL (2003), Cui S (2011), Wan C (2015)	4
TP53	0	TCP1	0	affinity chromatography technology, affinity chromatography technology	Fogeron ML (2013), Horikawa I (2014)	2
TRIM28	1	PPP1CC	2	affinity chromatography technology, affinity chromatography technology	Li X (2010), Li X (2010)	2
CHD4	22	RBBP7	1	affinity chromatography technology, affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Havugimana PC (2012), Huttlin EL (2015), Quan J (2014), Huttlin EL (2017)	7
PPARD	4	KDM1A	2	affinity chromatography technology, two hybrid	Weimann M (2013), Weimann M (2013)	2
MDM2	2	UBTF	8	unspecified method, enzymatic study	Nicholson J (2014), Guo Z (2013)	2
AR	3	RCOR1	0	bioid	Lempiaeinen JK (2017)	1
STAT3	0	NFKB1	2	affinity chromatography technology, pull down, imaging technique	Yu Z (2002), Yu Z (2002), Chen TC (2014)	3
DDX5	2	CREBBP	29	affinity chromatography technology	Rossow KL (2003)	1
HDAC1	4	HUS1	1	two hybrid, pull down, affinity chromatography technology	Cai RL (2000), Cai RL (2000), Cai RL (2000)	3
SIN3B	5	SMARCA4	19	pull down	Pal S (2003)	1
HDAC1	4	ING1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vieyra D (2002), Kuzmichev A (2002), Kuzmichev A (2002), Binda O (2008), Skowyra D (2001), Skowyra D (2001), Skowyra D (2001), Nikolaev AY (2004), Nikolaev AY (2004), Joshi P (2013), Hein MY (2015)	11
MTA2	1	KDM1A	2	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Wang Y (2009), Wang Y (2009), Wang Y (2009), Li Q (2011), Cui S (2011)	5
CREBBP	29	TRERF1	1	pull down, affinity chromatography technology	Gizard F (2001), Gizard F (2001)	2
ESR1	0	RBBP4	3	pull down, affinity chromatography technology	Creekmore AL (2008), Tarallo R (2011)	2
GATAD1	0	BRMS1	1	affinity chromatography technology	Varier RA (2016)	1
RUVBL2	4	HDAC2	1	affinity chromatography technology	Rashid S (2009)	1
TRIM28	1	CHD3	19	two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Stelzl U (2005), Goodarzi AA (2011), Goodarzi AA (2011), Ivanov AV (2007), Garvin AJ (2013)	5
MTA3	3	CDK2AP1	1	affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Hein MY (2015)	2
RUNX2	2	UBTF	8	affinity chromatography technology, affinity chromatography technology, biochemical	Ali SA (2012), Ali SA (2012), Ali SA (2012)	3
EZH2	4	DNMT3A	17	pull down, affinity chromatography technology, affinity chromatography technology	Vire E (2006), Vire E (2006), Vire E (2006)	3
AR	3	STAT3	0	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Matsuda T (2001), Ueda T (2002), Yamamoto T (2003), Yamamoto T (2003)	4
CHD3	19	GATAD2A	3	biochemical, biochemical, affinity chromatography technology	Havugimana PC (2012), Wan C (2015), Huttlin EL (2017)	3
AR	3	SIN3B	5	affinity chromatography technology	Zhu P (2006)	1
MTA3	3	GATAD2A	3	affinity chromatography technology, biochemical, affinity chromatography technology	Bantscheff M (2011), Wan C (2015), Huttlin EL (2017)	3
CEBPA	0	AR	3	pull down	Boruk M (1998)	1
GATAD1	0	SIN3A	13	affinity chromatography technology	Varier RA (2016)	1
EED	1	HDAC2	1	two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	van der Vlag J (1999), van der Vlag J (1999), van der Vlag J (1999), van der Vlag J (1999), van der Vlag J (1999), Cao Q (2014)	6
AR	3	EP300	36	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology	Dai Y (2008), Minges JT (2013), Zhong J (2014), Fu M (2000), McClurg UL (2016), Tan G (2017)	6
SIN3A	13	SNAI1	1	affinity chromatography technology	Hsu DS (2014)	1
CCND1	1	RB1	2	pull down, genetic interference, affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study	Siegert JL (2000), Siegert JL (2000), Dowdy SF (1993), Chan HM (2001), Dasgupta P (2004), Dasgupta P (2004), Sweeney KJ (1997), Higashi H (1996), Musgrove EA (1996), Yarbrough WG (1999), Connell-Crowley L (1997), Kitagawa M (1996), Poon RY (1996), Gaiddon C (2003), Zarkowska T (1997), Nakanishi M (1999), Welcker M (1998)	17
DAXX	5	AR	3	two hybrid, pull down, affinity chromatography technology, pull down	Lin DY (2004), Lin DY (2004), Lin DY (2004), Sun S (2016)	4
SFPQ	2	HDAC2	1	affinity chromatography technology	Tyson-Capper AJ (2009)	1
POU2F1	5	CREB1	1	affinity chromatography technology, pull down, pull down	Boulon S (2002), Boulon S (2002), Boulon S (2002)	3
HDAC2	1	ZMYM3	0	affinity chromatography technology, affinity chromatography technology	Hakimi MA (2003), Bantscheff M (2011)	2
EP300	36	SMAD7	1	affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study	Groenroos E (2002), Groenroos E (2002), Groenroos E (2002), Groenroos E (2002)	4
PARP1	3	HIST1H4A	0	enzymatic study	Rajamohan SB (2009)	1
BCL11B	3	MTA2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005)	4
NR3C1	2	MTA2	1	biochemical	Kristensen AR (2012)	1
HMG20B	2	RCOR3	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
RBL2	5	E2F1	0	affinity chromatography technology	Dhillon NK (2002)	1
EED	1	PHB	0	affinity chromatography technology	Cao Q (2014)	1
APPL1	1	RBBP7	1	affinity chromatography technology, pull down	Banach-Orlowska M (2009), Miaczynska M (2004)	2
NCOR2	12	CREBBP	29	affinity chromatography technology	Cowger JJ (2006)	1
EP300	36	BCL6	6	enzymatic study, affinity chromatography technology	Bereshchenko OR (2002), Bereshchenko OR (2002)	2
DDB1	6	MBD3	4	biochemical	Havugimana PC (2012)	1
HDAC1	4	TP73	2	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Uramoto H (2004), Uramoto H (2004), Uramoto H (2004), Zhang J (2007)	4
DDB1	6	DNMT3A	17	affinity chromatography technology, pull down	Yang Y (2015), Yang Y (2015)	2
GATAD1	0	BRMS1L	1	affinity chromatography technology	Varier RA (2016)	1
TRIM28	1	UHRF1	3	affinity chromatography technology, affinity chromatography technology	Quenneville S (2011), Quenneville S (2011)	2
RUNX1T1	1	BCL6	6	affinity chromatography technology, affinity chromatography technology	Chevallier N (2004), Chevallier N (2004)	2
HDAC1	4	BCL6	6	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	David G (1998), Deltour S (1999), Fujita N (2004), Fujita N (2004), Dhordain P (1998), Miles RR (2005)	6
HDAC1	4	KDM5A	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	3
TAL1	0	SIN3A	13	affinity chromatography technology, pull down, pull down	Huang S (2000), Huang S (2000), Huang S (2000)	3
CUL4B	8	PCNA	0	affinity chromatography technology	Banks D (2006)	1
NR3C1	2	GSE1	14	bioid	Lempiaeinen JK (2017)	1
HDAC2	1	ARID5B	5	affinity chromatography technology	Joshi P (2013)	1
SFPQ	2	SP3	4	affinity chromatography technology	Tyson-Capper AJ (2009)	1
GATAD2B	15	MTA2	1	affinity chromatography technology, biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Feng Q (2002), Havugimana PC (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	5
ESR1	0	RUVBL2	4	affinity chromatography technology	Tarallo R (2011)	1
HIST1H4A	0	GATAD2A	3	pull down	Brackertz M (2006)	1
YY1	7	DDX5	2	affinity chromatography technology	Vella P (2011)	1
MORF4L1	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Hayakawa T (2007), Hayakawa T (2010), Doyon Y (2004), Wan C (2015)	4
CHD4	22	PARP1	3	pull down, affinity chromatography technology	Silva AP (2016), Qi W (2016)	2
NKX3-2	1	RBBP4	3	affinity chromatography technology	Kim DW (2003)	1
BRMS1	1	RBBP4	3	affinity chromatography technology	Meehan WJ (2004)	1
SINHCAF	0	SAP130	2	affinity chromatography technology	Huttlin EL (2017)	1
MBD2	1	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Feng Q (2001), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	4
NR0B2	1	AR	3	pull down, two hybrid, pull down	Gobinet J (2001), Gobinet J (2001), Obendorf M (2007)	3
MYC	2	SMARCA4	19	affinity chromatography technology, affinity chromatography technology, pull down, fluorescent resonance energy transfe	Ewing RM (2007), Park J (2002), Pal S (2003), Ivanov AA (2017)	4
ARID4B	1	SAP130	2	affinity chromatography technology, biochemical	Fleischer TC (2003), Wan C (2015)	2
ESR1	0	BCL3	2	affinity chromatography technology	Rubio MF (2006)	1
NR3C1	2	NCOR2	12	two hybrid, affinity chromatography technology	Schulz M (2002), Ki SH (2005)	2
TP53	0	CDKN1A	1	affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, imaging technique	Tian H (2002), Vinayagam A (2011), Kinyamu HK (2003), Giono LE (2007), Chen TC (2014)	5
SMARCAD1	1	CSNK2A1	15	affinity chromatography technology	Rowbotham SP (2011)	1
NR2C1	0	MTA2	1	affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011)	2
IKZF1	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Koipally J (2002), Kim J (1999), Kim J (1999)	3
ING1	2	BRMS1L	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Nikolaev AY (2004), Nikolaev AY (2004), Nikolaev AY (2004)	3
RUNX2	2	RB1	2	affinity chromatography technology	Thomas DM (2004)	1
CTBP1	2	CHD3	19	two hybrid	Vinayagam A (2011)	1
DDX17	2	SFPQ	2	biochemical	Wan C (2015)	1
TP53	0	KMT2A	58	pull down, affinity chromatography technology	Dou Y (2005), Fogeron ML (2013)	2
ZMYND8	5	MBD2	1	affinity chromatography technology	Hein MY (2015)	1
HDAC1	4	TNRC18	8	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	3
BHLHE41	0	NONO	3	two hybrid	Wallach T (2013)	1
TLE1	6	CTNNB1	30	pull down	Levanon D (1998)	1
SMARCAD1	1	NR2F2	4	affinity chromatography technology	Rowbotham SP (2011)	1
UHRF1	3	RB1	2	affinity chromatography technology, affinity chromatography technology	Jeanblanc M (2005), Jeanblanc M (2005)	2
SMAD2	5	CREBBP	29	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, two hybrid, affinity chromatography technology	Xi Q (2008), Chan EC (2010), He W (2006), Chen W (2007), Colland F (2004), Cui Q (2005)	6
HIST1H2BA	0	H2AFY	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
NR0B2	1	RUNX2	2	affinity chromatography technology	Jeong BC (2010)	1
HMG20A	0	MTA2	1	affinity chromatography technology	Hein MY (2015)	1
PHF12	6	EMSY	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Varier RA (2016), Varier RA (2016)	3
SYK	3	SP1	0	affinity chromatography technology	Wang L (2005)	1
HDAC1	4	NCOR2	12	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Fischer DD (2002), Fischer DD (2002), Underhill C (2000), Wang L (2006)	4
DNMT3L	2	DNMT3A	17	affinity chromatography technology, pull down, two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, imaging technique	Hata K (2002), Ooi SK (2007), Margot JB (2003), Chen ZX (2005), Chen ZX (2005), Suetake I (2004), Suetake I (2004), Suetake I (2004), Pacaud R (2014)	9
KMT2A	58	CTBP1	2	pull down, affinity chromatography technology	Xia ZB (2003), Xia ZB (2003)	2
BCL11B	3	RBBP4	3	affinity chromatography technology, affinity chromatography technology, pull down	Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005)	3
EP300	36	SMAD2	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology	Wotton D (1999), Pessah M (2001), Furumatsu T (2005), Wang J (2011), Suganuma T (2002)	5
CDKN1A	1	PCNA	0	two hybrid, pull down, pull down, pull down, pull down, x-ray crystallography, pull down, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method, pull down, affinity chromatography technology, biochemical, pull down, affinity chromatography technology, affinity chromatography technology, two hybrid, unspecified method, affinity chromatography technology, biochemical, two hybrid, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Rual JF (2005), Frouin I (2003), Watanabe H (1998), Fotedar R (1996), Jonsson ZO (1998), Gulbis JM (1996), Touitou R (2001), Yu P (2001), Yu P (2001), Chen X (2007), Chen X (2007), Wang SC (2006), Carujo S (2006), Garcia-Wilson E (2005), Howlett NG (2009), Jin Y (2008), Lee JY (2009), Ando T (2001), Ando T (2001), Takasaki Y (2001), Logette E (2011), Mistafa O (2010), Mistafa O (2010), Bruning JB (2004), Punchihewa C (2012), Mattock H (2001), Waga S (1994), Waga S (1994), Poon RY (1996), Zhang Y (1999), Warbrick E (1995), Warbrick E (1995), Poon RY (1998), Poon RY (1998), Wang J (2011), Fogeron ML (2013), Rolland T (2014), Rizzardi LF (2014), Trombetta A (2013), Trombetta A (2013), Kim DH (2010), Huttlin EL (2015), Hein MY (2015), Hein MY (2015), Coleman KE (2015), Huttlin EL (2017), Roessig L (2001), Roessig L (2001)	48
SIN3B	5	TNRC18	8	affinity chromatography technology	Hein MY (2015)	1
NR3C1	2	NFKB1	2	pull down, affinity chromatography technology	Scheinman RI (1995), Ito K (2006)	2
HDAC1	4	HELLS	1	imaging technique, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Zhou R (2009), Zhou R (2009), Zhou R (2009), Zhou R (2009), Myant K (2008)	5
KDM1A	2	RREB1	6	affinity chromatography technology	Shi YJ (2005)	1
MBD3L1	0	BCL11A	14	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
PHB	0	AR	3	affinity chromatography technology	Gamble SC (2007)	1
IKZF1	2	MTA2	1	affinity chromatography technology	Huttlin EL (2017)	1
RB1	2	TP53	0	affinity chromatography technology, pull down	Delston RB (2011), Sommer MH (1994)	2
CCND1	1	AR	3	affinity chromatography technology, pull down, affinity chromatography technology	Petre-Draviam CE (2005), Petre-Draviam CE (2005), Knudsen KE (1999)	3
CCND1	1	CDKN1A	1	pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, pull down, pull down, affinity chromatography technology, pull down, two hybrid, affinity chromatography technology, two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Lin J (1996), Guidoboni M (2005), Garcia-Wilson E (2005), Santiago FS (2007), Santiago FS (2007), Zheleva DI (2002), Ruas M (2007), Chen J (1996), Chen J (1996), Poon RY (1996), Ramachandran N (2004), Wang J (2011), Fogeron ML (2013), Rolland T (2014), Yu H (2011), Datta D (2015), Hukkelhoven E (2012), Hukkelhoven E (2012), Hukkelhoven E (2012), Huttlin EL (2017), Welcker M (1998)	21
AR	3	TGIF1	1	pull down	Sharma M (2001)	1
WDR5	2	ING2	0	affinity chromatography technology	Xu Z (2012)	1
EED	1	MTA1	3	affinity chromatography technology	Cao Q (2014)	1
KDM1A	2	TRIM28	1	affinity chromatography technology	Cui S (2011)	1
RELA	1	BRMS1	1	affinity chromatography technology, affinity chromatography technology, pull down	Liu Y (2006), Liu Y (2006), Liu Y (2006)	3
BCL3	2	CTNNB1	30	affinity chromatography technology	Kim JH (2005)	1
KDM1A	2	MTA3	3	affinity chromatography technology, pull down, affinity chromatography technology	Wang Y (2009), Wang Y (2009), Li Q (2011)	3
HDAC1	4	ZBTB2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	3
NFKB1	2	KLF5	4	affinity chromatography technology, affinity chromatography technology	Aizawa K (2004), Nagai R (2005)	2
PHB2	1	NR2F2	4	pull down	Kurtev V (2004)	1
DDB1	6	ARID4B	1	affinity chromatography technology, affinity chromatography technology	Ji Q (2014), Ji Q (2014)	2
EED	1	KDM1A	2	affinity chromatography technology	Cao Q (2014)	1
SMARCA4	19	RBBP4	3	biochemical	Sif S (2001)	1
MTA3	3	MTA1	3	biochemical	Wan C (2015)	1
SIN3A	13	TP53	0	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Murphy M (1999), Murphy M (1999), Murphy M (1999), Zilfou JT (2001)	4
SMARCAD1	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Rowbotham SP (2011), Rowbotham SP (2011), Rowbotham SP (2011)	3
ZBTB16	4	HDAC1	4	pull down, pull down, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down	Chauchereau A (2004), David G (1998), David G (1998), David G (1998), David G (1998), Wong CW (1998), Melnick A (2002), Melnick A (2002), Puccetti E (2005), Thirkettle HJ (2009), Choi WI (2014), Girard N (2013)	12
ING2	0	RBBP4	3	affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Doyon Y (2006)	2
EED	1	TRIM28	1	affinity chromatography technology	Cao Q (2014)	1
HDAC2	1	DNMT1	5	affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Rountree MR (2000), Rountree MR (2000), Myant K (2008), Cui S (2011), Cai Y (2014), Cai Y (2014)	6
DNMT3A	17	HIST1H3A	3	pull down, bioid, unspecified method, pull down	Otani J (2009), Lambert JP (2015), Sankaran SM (2016), Sankaran SM (2016)	4
IKZF1	2	SMARCA4	19	pull down	Kim J (1999)	1
PML	7	MDM2	2	affinity chromatography technology, pull down, affinity chromatography technology, pull down, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bernardi R (2004), Bernardi R (2004), Zhu H (2003), Zhu H (2003), Kurki S (2003), Kurki S (2003), Wei X (2003), Wei X (2003), Wu Q (2009), Chu Y (2011), Yang Q (2013), Yang Q (2013), Bursac S (2012)	13
CSNK2A1	15	TP53	0	enzymatic study, affinity chromatography technology, affinity chromatography technology, imaging technique, pull down, enzymatic study	Uhle S (2003), Fogeron ML (2013), Bhansali M (2014), Chen TC (2014), Walerych D (2004), Walerych D (2004)	6
HDAC1	4	MDM2	2	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, imaging technique	Ito A (2002), Ito A (2002), Ito A (2002), Gaughan L (2005), Gaughan L (2005)	5
NR3C1	2	HIST1H3A	3	protein complementation assay	Lievens S (2016)	1
EP300	36	ING2	0	affinity chromatography technology	Wang Y (2006)	1
TP53	0	DCAF1	5	pull down	Kim K (2012)	1
NFKB1	2	RUVBL2	4	imaging technique, affinity chromatography technology	Kim JH (2005), Kim JH (2005)	2
ESR1	0	PARP1	3	affinity chromatography technology, affinity chromatography technology	Ju BG (2006), Tarallo R (2011)	2
MBD3L1	0	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
MTA1	3	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, pull down, x-ray crystallography, unspecified method, biochemical, affinity chromatography technology, affinity chromatography technology, pull down, x-ray crystallography, affinity chromatography technology	Yao YL (2003), Roche AE (2008), Cui S (2011), Cui S (2011), Rolland T (2014), Huttlin EL (2015), Alqarni SS (2014), Alqarni SS (2014), Alqarni SS (2014), Wan C (2015), Huttlin EL (2017), Millard CJ (2016), Millard CJ (2016), Millard CJ (2016), Hauri S (2016)	15
SMAD2	5	RUNX1	0	affinity chromatography technology	Hanai J (1999)	1
CEBPA	0	HDAC1	4	affinity chromatography technology, biochemical, imaging technique, affinity chromatography technology	Duan H (2005), Matsunaga N (2012), Matsunaga N (2012), Girard N (2013)	4
RUVBL2	4	EHMT2	4	affinity chromatography technology, affinity chromatography technology, pull down	Lee JS (2010), Lee JS (2010), Lee JS (2010)	3
PARP1	3	PHB	0	affinity chromatography technology	Wu T (2013)	1
TRIM28	1	NR3C1	2	affinity chromatography technology, pull down, biochemical	Chang CJ (1998), Chang CJ (1998), Kristensen AR (2012)	3
HDAC1	4	ZMYM3	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	3
MDM2	2	TP73	2	pull down, affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down	Balint E (1999), Zeng X (1999), Zeng X (1999), Chen L (2010), Zdzalik M (2010), Kim JW (2008), Balint E (1999), Balint E (1999), Wang J (2011), Ongkeko WM (1999), Ongkeko WM (1999), Ongkeko WM (1999), Ongkeko WM (1999), Wu H (2015), Stindt MH (2015), Zhou X (2015), Zhou X (2015)	17
RBBP4	3	GATAD2A	3	pull down, biochemical, affinity chromatography technology, affinity chromatography technology	Gong Z (2006), Havugimana PC (2012), Huttlin EL (2017), Hauri S (2016)	4
YY1	7	MTA2	1	pull down	Yao YL (2003)	1
BRMS1	1	SNAI1	1	two hybrid	Arroyo R (2015)	1
EZH2	4	SNAI1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, biochemical	Herranz N (2008), Tong ZT (2012), Tong ZT (2012), Chen J (2014), Chen J (2014)	5
HDAC2	1	HIF1A	1	pull down, imaging technique	Mahon PC (2001), Chen TC (2014)	2
CHFR	5	RELA	1	affinity chromatography technology, affinity chromatography technology	Kashima L (2009), Kashima L (2009)	2
HDAC1	4	NFKB1	2	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, imaging technique, imaging technique, affinity chromatography technology, imaging technique	Zhong H (2002), Zhong H (2002), Zhong H (2002), Viatour P (2003), Williams SA (2006), Williams SA (2006), Sun JM (2007), Chen TC (2014)	8
SMARCAD1	1	EHMT2	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Rowbotham SP (2011), Rowbotham SP (2011), Rowbotham SP (2011)	3
CDK2AP1	1	CHD3	19	affinity chromatography technology	Hein MY (2015)	1
CTBP1	2	RBL1	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
TP53	0	ESR1	0	pull down, affinity chromatography technology, affinity chromatography technology	Liu G (2000), Duong V (2007), Saxena R (2016)	3
TP53	0	SMARCA4	19	pull down, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Lee D (2002), Lee D (2002), Lee D (2002), Napolitano MA (2007), Guan B (2011), Oh J (2008)	6
NSD2	9	ESR1	0	enzymatic study	Zhang X (2013)	1
GATAD2B	15	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Feng Q (2002), Bantscheff M (2011), Joshi P (2013), Huttlin EL (2015), Huttlin EL (2017)	5
E2F4	0	AR	3	affinity chromatography technology, affinity chromatography technology	Li Y (2012), Li Y (2012)	2
RUNX1	0	RUNX1T1	1	biochemical, affinity chromatography technology	Minucci S (2000), Shia WJ (2012)	2
CDYL	1	EZH2	4	affinity chromatography technology	Zhang Y (2011)	1
EP300	36	CEBPD	0	enzymatic study	Wang JM (2006)	1
CDYL	1	MIER2	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Huttlin EL (2015), Huttlin EL (2017)	3
CCND1	1	ESR1	0	pull down, two hybrid, affinity chromatography technology, affinity chromatography technology, pull down	Zwijsen RM (1997), Zwijsen RM (1997), Zwijsen RM (1997), Wang C (2005), Wang C (2005)	5
PHF21A	4	HDAC2	1	biochemical, pull down, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2002), Iwase S (2004), Hakimi MA (2003), Joshi P (2013)	4
GATAD1	0	RBBP4	3	affinity chromatography technology	Varier RA (2016)	1
SMARCA2	17	TOP2B	9	biochemical	Havugimana PC (2012)	1
SFPQ	2	NR3C1	2	affinity chromatography technology	Tyson-Capper AJ (2009)	1
PCNA	0	NSD2	9	affinity chromatography technology, pull down	Evans DL (2016), Evans DL (2016)	2
ZMYND8	5	SMARCA4	19	affinity chromatography technology	Velasco G (2006)	1
RB1	2	E2F4	0	two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Fajas L (2000), Iavarone A (1999), Moberg K (1996), Ezhevsky SA (1997), Ginsberg D (1994), Trimarchi JM (1998)	6
DDB1	6	CTNNB1	30	affinity chromatography technology	Kawajiri K (2009)	1
AR	3	ZBTB16	4	two hybrid	van de Wijngaart DJ (2009)	1
RELA	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique	Kiernan R (2003), Yu Z (2002), Yu Z (2002), Ito K (2001), Ito K (2000), Sun JM (2007), Adenuga D (2010), Wang H (2010), Chen TC (2014)	9
ING2	0	SIN3B	5	affinity chromatography technology	Huttlin EL (2017)	1
BRMS1	1	SUDS3	3	two hybrid, affinity chromatography technology, two hybrid	Hurst DR (2006), Hurst DR (2006), Meehan WJ (2004)	3
MTA1	3	ESR1	0	affinity chromatography technology, pull down, pull down, pull down, pull down, pull down	Kumar R (2002), Kumar R (2002), Kumar R (2002), Mazumdar A (2001), Singh RR (2006), Mishra SK (2003)	6
DAXX	5	DMAP1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Muromoto R (2004), Muromoto R (2004), Muromoto R (2004)	3
MYOD1	0	DDX5	2	affinity chromatography technology	Caretti G (2006)	1
FOXK2	9	SAP130	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Li X (2015), Shan L (2016), Shan L (2016), Shan L (2016)	4
RB1	2	MDM2	2	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, pull down, affinity chromatography technology, pull down	Hsieh JK (1999), Nguyen DX (2004), Zheng Z (2012), Sdek P (2005), Delston RB (2011), Delston RB (2011), Sdek P (2004), Sdek P (2004), Xiao ZX (1995), Xiao ZX (1995), Xiao ZX (1995), Uchida C (2006), Markham D (2006), Chan HM (2001), Chan HM (2001), Zhang H (2015), Zhang H (2015), Jaenicke RU (1996)	18
SMARCA2	17	RBBP4	3	biochemical, affinity chromatography technology	Sif S (2001), Nakamura T (2002)	2
ZNF217	3	KDM5B	27	affinity chromatography technology	Banck MS (2009)	1
CUL4B	8	RBBP7	1	affinity chromatography technology	Mouysset J (2015)	1
ZBTB16	4	HDAC2	1	pull down	Chauchereau A (2004)	1
SMARCA4	19	CREBBP	29	genetic interference	DiRenzo J (2000)	1
TP53	0	PCNA	0	affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology	Banks D (2006), Banks D (2006), Hampp S (2016), Hampp S (2016)	4
CEBPA	0	E2F4	0	affinity chromatography technology, affinity chromatography technology	Bararia D (2008), Wang GL (2004)	2
ESR1	0	KLF5	4	affinity chromatography technology, affinity chromatography technology, pull down	Guo P (2010), Guo P (2010), Guo P (2010)	3
DAXX	5	DNMT3A	17	affinity chromatography technology	Halder UC (2013)	1
PML	7	PARK7	0	affinity chromatography technology	Kim SJ (2012)	1
PML	7	SIN3A	13	pull down, affinity chromatography technology	Khan MM (2001), Khan MM (2001)	2
CREBBP	29	MYOD1	0	affinity chromatography technology, pull down, genetic interference, pull down, enzymatic study, enzymatic study	Polesskaya A (2001), Polesskaya A (2001), Sartorelli V (1997), Sartorelli V (1997), Polesskaya A (2000), Col E (2002)	6
HDAC1	4	DDX5	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Wilson BJ (2004), Wilson BJ (2004), Guo J (2010), Jacobs AM (2007), Mooney SM (2010), Mooney SM (2010)	6
EED	1	DDB1	6	affinity chromatography technology	Higa LA (2006)	1
HDAC1	4	CTBP1	2	pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Zhang CL (2001), Melhuish TA (2000), Sundqvist A (1998), Jin W (2008), Joshi P (2013)	5
RBL2	5	RBBP4	3	affinity chromatography technology	Litovchick L (2007)	1
DAXX	5	DNMT1	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Muromoto R (2004), Muromoto R (2004), Halder UC (2013), Halder UC (2013), Zhang H (2013), Zhang H (2013)	6
FOXK2	9	RB1	2	affinity chromatography technology	Li X (2015)	1
PHF12	6	KDM5A	6	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Varier RA (2016)	2
CREBBP	29	EP300	36	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Crusselle-Davis VJ (2007), Dohda T (2004), Dohda T (2004)	3
SIN3A	13	ARID4B	1	affinity chromatography technology, affinity chromatography technology, biochemical	Fleischer TC (2003), Fleischer TC (2003), Wan C (2015)	3
NR2C1	0	SFPQ	2	affinity chromatography technology	Cui S (2011)	1
IKZF1	2	MORF4L1	1	two hybrid	Rolland T (2014)	1
EZH2	4	TLE1	6	affinity chromatography technology, affinity chromatography technology	Su L (2012), Su L (2012)	2
RCOR1	0	CTBP1	2	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Banck MS (2009), Kuppuswamy M (2008), Kuppuswamy M (2008), Huttlin EL (2015), Huttlin EL (2017)	5
PARK7	0	SFPQ	2	affinity chromatography technology, affinity chromatography technology	Xu J (2005), Xu J (2005)	2
CHD3	19	TP53	0	two hybrid, two hybrid	Minty A (2000), Goehler H (2004)	2
MDM2	2	E2F1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study	Zhang Z (2005), Zhang Z (2005), Stevens C (2008), Stevens C (2008)	4
SMARCAD1	1	YY1	7	affinity chromatography technology	Rowbotham SP (2011)	1
EZH2	4	RBBP4	3	affinity chromatography technology, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Li G (2010), Kaneko S (2010), Kaneko S (2010), Cao Q (2014), Hein MY (2015), Hauri S (2016), Hauri S (2016)	7
CSNK2A1	15	RBBP4	3	biochemical	Havugimana PC (2012)	1
CDYL	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Caron C (2003), Caron C (2003), Mulligan P (2008), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013)	6
MBD3L1	0	MTA2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
RBL1	1	SMARCA4	19	two hybrid	Dunaief JL (2002)	1
SP1	0	NCOR2	12	two hybrid, affinity chromatography technology, pull down	Lee JA (2005), Lee JA (2005), Lee JA (2005)	3
KDM5B	27	CHD3	19	affinity chromatography technology	Li Q (2011)	1
PHB	0	SMARCA4	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Wang S (2002), Wang S (2002), Wang S (2004), Wang S (2004)	4
HDAC1	4	DCAF1	5	pull down, affinity chromatography technology, affinity chromatography technology	Kim K (2012), Romani B (2016), Romani B (2016)	3
SMAD2	5	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Wotton D (1999), Wotton D (1999), Takeda M (2004), Lo RS (2001)	4
YY1	7	SP1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Bennett MK (1999), Li H (2008), Li H (2008), Santiago FS (2007), Qiao H (2011), Lee JS (1993), Lee JS (1993)	7
TP53	0	TXNIP	2	affinity chromatography technology	Suh HW (2013)	1
HDAC1	4	RUNX1T1	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique	Amann JM (2001), Zhang J (2004), Gelmetti V (1998), Liu S (2007), Liu S (2007), Chen TC (2014)	6
ESR1	0	UBTF	8	affinity chromatography technology	Tarallo R (2011)	1
DNMT3L	2	RELA	1	pull down, imaging technique, affinity chromatography technology, pull down	Pacaud R (2014), Pacaud R (2014), Pacaud R (2014), Pacaud R (2014)	4
MYC	2	TRIM28	1	affinity chromatography technology	Koch HB (2007)	1
FOXK2	9	BRMS1L	1	affinity chromatography technology	Li X (2015)	1
DNMT1	5	RB1	2	biochemical, pull down, affinity chromatography technology, pull down, affinity chromatography technology	Robertson KD (2000), Robertson KD (2000), Robertson KD (2000), Pradhan S (2002), Pradhan S (2002)	5
PARP1	3	MTA3	3	two hybrid	Arroyo R (2015)	1
EED	1	DNMT1	5	affinity chromatography technology, imaging technique, affinity chromatography technology	Vire E (2006), Vire E (2006), OHagan HM (2011)	3
E2F1	0	ESR1	0	affinity chromatography technology, affinity chromatography technology	Liu W (2012), Liu W (2012)	2
BHLHE41	0	WDR5	2	two hybrid	Wallach T (2013)	1
FOXK2	9	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Li X (2015), Shan L (2016), Shan L (2016), Shan L (2016)	4
HIF1A	1	TP53	0	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Chen D (2003), Ravi R (2000), Hansson LO (2002), An WG (1998), An WG (1998), Chowdhury AR (2017), Chowdhury AR (2017), Suzuki H (2001), Sanchez-Puig N (2005)	9
HMG20A	0	GATAD2B	15	affinity chromatography technology	Hein MY (2015)	1
MYC	2	RELA	1	affinity chromatography technology, affinity chromatography technology, fluorescent resonance energy transfe	Chapman NR (2002), Covic M (2005), Ivanov AA (2017)	3
CSNK2A1	15	TP73	2	affinity chromatography technology, affinity chromatography technology, enzymatic study	Lu H (2014), Lu H (2014), Lu H (2014)	3
BCL11A	14	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cismasiu VB (2005), Huttlin EL (2015), Huttlin EL (2017)	3
SINHCAF	0	ING2	0	affinity chromatography technology	Huttlin EL (2017)	1
GATAD2B	15	CHD3	19	affinity chromatography technology, biochemical, affinity chromatography technology	Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	3
H2AFY	1	HDAC1	4	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ouararhni K (2006), Chakravarthy S (2005), Chakravarthy S (2005), Wu C (2007), Wu C (2007)	5
MORF4L1	1	EMSY	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Varier RA (2016), Huttlin EL (2017)	3
HDAC1	4	NSD2	9	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Todoerti K (2005), Todoerti K (2005), Marango J (2008), Marango J (2008), Kim JY (2008), Kim JY (2008), Min DJ (2013)	7
PML	7	SATB1	1	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, imaging technique	Kumar PP (2007), Kumar PP (2007), Kumar PP (2007), Kumar PP (2007), Tan JA (2008)	5
MYC	2	MDM2	2	fluorescent resonance energy transfe	Ivanov AA (2017)	1
EHMT2	4	TRIM28	1	affinity chromatography technology	Hauri S (2016)	1
HDAC2	1	HMG20B	2	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2002), Hakimi MA (2002), Hakimi MA (2002), Hakimi MA (2003), Hakimi MA (2002), Bantscheff M (2011), Joshi P (2013), Huttlin EL (2015), Huttlin EL (2017)	9
CHD4	22	UBTF	8	affinity chromatography technology	Rahman S (2011)	1
MBD3L1	0	CHD4	22	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
BAHD1	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Lebreton A (2011), Lebreton A (2011), Huttlin EL (2017)	3
NR2C1	0	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011), Cui S (2011)	3
HIST1H2BA	0	MIER1	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
AR	3	KMT2A	58	affinity chromatography technology, affinity chromatography technology	Grasso CS (2012), Grasso CS (2012)	2
SAP30	1	TNRC18	8	affinity chromatography technology	Hein MY (2015)	1
BCL11B	3	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, imaging technique	Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005)	5
DAXX	5	PARP1	3	affinity chromatography technology	Hein MY (2015)	1
SMARCAD1	1	KDM1A	2	affinity chromatography technology	Rowbotham SP (2011)	1
RUVBL2	4	DMAP1	2	affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology	Jeronimo C (2007), Doyon Y (2004), Havugimana PC (2012), Wan C (2015), Huttlin EL (2017), Cloutier P (2017)	6
RBBP7	1	SIN3A	13	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1998), Kuzmichev A (2002), Nakamura T (2002), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	6
CUL4B	8	SUDS3	3	affinity chromatography technology, affinity chromatography technology, biochemical	Ji Q (2014), Ji Q (2014), Ji Q (2014)	3
TP53	0	MTA2	1	pull down, affinity chromatography technology, pull down	Yao YL (2003), Luo J (2000), Luo J (2000)	3
NCOR2	12	E2F4	0	affinity chromatography technology, affinity chromatography technology	Li Y (2012), Li Y (2012)	2
HDAC1	4	MYC	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Matsuoka Y (2008), Matsuoka Y (2008), Liu T (2007), Liu T (2007), Liu T (2007), Koch HB (2007), Hwang IY (2012), Hein MY (2015)	8
HDAC1	4	GATAD2A	3	pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gong Z (2006), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	6
KDM5B	27	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology	Shi L (2011), Li Q (2011), Li Q (2011), Li Q (2011), Li Q (2011), Barrett A (2007), Barrett A (2007)	7
IKZF1	2	RBBP4	3	affinity chromatography technology, affinity chromatography technology	Kim J (1999), Kim J (1999)	2
E2F1	0	DDB1	6	affinity chromatography technology	Hayes S (1998)	1
UHRF2	1	RB1	2	far western blotting, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Mori T (2011), Mori T (2011), Mori T (2011), Mori T (2011), Lai M (2016)	5
HIST1H2BA	0	ARID5B	5	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MECP2	36	PPARG	0	affinity chromatography technology	Pancione M (2010)	1
MYOD1	0	CREB1	1	affinity chromatography technology	Magenta A (2003)	1
MTA2	1	TOP2B	9	affinity chromatography technology	Tsai SC (2000)	1
MDM2	2	HIF1A	1	pull down, affinity chromatography technology, enzymatic study, two hybrid, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology	Chen D (2003), Chen D (2003), Ravi R (2000), Lee YM (2009), Lee YM (2009), Lee YM (2009), Maroni P (2014), Amelio I (2015), Yoo YG (2004), LaRusch GA (2007), LaRusch GA (2007), Nieminen AL (2005)	12
GATAD1	0	SAP30	1	affinity chromatography technology	Varier RA (2016)	1
FOXK2	9	NCOR2	12	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Li X (2015), Shan L (2016), Shan L (2016), Shan L (2016)	4
SPI1	1	SIN3A	13	affinity chromatography technology, pull down	Kihara-Negishi F (2001), Kihara-Negishi F (2001)	2
MTA1	3	GATAD2B	15	biochemical, affinity chromatography technology, biochemical, affinity chromatography technology	Havugimana PC (2012), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	4
SPI1	1	CREM	1	pull down	Pongubala JM (1995)	1
KDM1A	2	E2F1	0	enzymatic study, enzymatic study	Kontaki H (2010), Xie Q (2011)	2
MORF4L1	1	DMAP1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Doyon Y (2004), Doyon Y (2004), Huttlin EL (2015), Huttlin EL (2017)	5
DNMT1	5	RBBP4	3	affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011)	2
CREB1	1	HDAC1	4	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Canettieri G (2003), Canettieri G (2003), Canettieri G (2003), Kim HC (2010)	4
TP73	2	EP300	36	affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, x-ray crystallography, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology	Strano S (2005), Uramoto H (2004), Zeng X (2000), Zeng X (2000), Zeng X (2000), Zeng X (2000), Zeng X (2000), Mantovani F (2004), Burge S (2009), Burge S (2009), Costanzo A (2002), Hoffmann A (2008), Kramer D (2015)	13
EED	1	PHB2	1	affinity chromatography technology	Cao Q (2014)	1
BCL11A	14	MBD3	4	affinity chromatography technology	Cismasiu VB (2005)	1
HDAC1	4	CREBBP	29	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Mayanil CS (2006), Chuang HC (2006), Chuang HC (2006)	3
HDAC1	4	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yao YL (2003), Yao YL (2003), Grozinger CM (1999), Tong JK (1998), Tong JK (1998), Humphrey GW (2001), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Zhang Y (1998), Terhune SS (2010), Polo SE (2010), Xue Y (1998), Xue Y (1998), Xue Y (1998), Kwintkiewicz J (2011), Cui S (2011), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Quan J (2014), Wan C (2015), Hein MY (2015), Weiss K (2016), Huttlin EL (2017)	28
WDR5	2	KMT2A	58	affinity chromatography technology, biochemical, affinity chromatography technology, pull down, x-ray crystallography, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method, unspecified method, unspecified method, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, biochemical, pull down, affinity chromatography technology	Yokoyama A (2004), Yokoyama A (2004), Yokoyama A (2004), Song JJ (2008), Avdic V (2011), Paggetti J (2010), Mak AB (2010), Dharmarajan V (2012), Dharmarajan V (2012), Zhang P (2012), Senisterra G (2013), Tang Z (2013), Shinsky SA (2014), Huttlin EL (2015), Huttlin EL (2017), Alicea-Velazquez NL (2016), Weirich S (2017), Weirich S (2017), Hauri S (2016)	19
SMAD2	5	CTNNB1	30	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Tian YC (2002), Dahle O (2010), Xi Y (2013)	3
SMAD2	5	KLF5	4	affinity chromatography technology, affinity chromatography technology	Brown KA (2008), Guo P (2009)	2
NCOR2	12	SIN3A	13	biochemical, pull down	Li J (2000), Huang EY (2000)	2
ZMYM2	5	PML	7	affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, affinity chromatography technology	Kunapuli P (2006), Kunapuli P (2006), Kunapuli P (2006), Guzzo CM (2014), Guzzo CM (2014)	5
RB1	2	MYC	2	two hybrid, fluorescent resonance energy transfe	Adnane J (1995), Ivanov AA (2017)	2
CSNK2A1	15	DAXX	5	enzymatic study	Chang CC (2011)	1
MBD2	1	GATAD2B	15	pull down, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Brackertz M (2002), Feng Q (2002), Feng Q (2002), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017)	6
RB1	2	CEBPD	0	affinity chromatography technology	Gery S (2005)	1
SMARCAD1	1	DDX17	2	affinity chromatography technology	Rowbotham SP (2011)	1
TAL1	0	KDM1A	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Hu X (2009), Hu X (2009), Hu X (2009), Hu X (2009)	4
HMG20A	0	RCOR3	0	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Huttlin EL (2017)	2
SMARCA4	19	STAT3	0	affinity chromatography technology, affinity chromatography technology, pull down	Giraud S (2004), Giraud S (2004), Giraud S (2004)	3
RCOR1	0	KDM5B	27	affinity chromatography technology	Banck MS (2009)	1
DNMT3L	2	MECP2	36	pull down	Pacaud R (2014)	1
DNMT1	5	DMAP1	2	two hybrid, pull down, pull down, affinity chromatography technology	Rountree MR (2000), Rountree MR (2000), Rountree MR (2000), Rountree MR (2000)	4
EZH2	4	PHB2	1	pull down	Hwang C (2008)	1
CREBBP	29	PARP1	3	enzymatic study, imaging technique	Hassa PO (2005), Chen H (2014)	2
HDAC2	1	H2AFY	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Chakravarthy S (2005), Wu C (2007), Wu C (2007)	3
PARK7	0	TRIM28	1	affinity chromatography technology	Malty RH (2017)	1
HDAC2	1	CCND1	1	affinity chromatography technology	Fu M (2005)	1
BRMS1L	1	SAP30	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Nikolaev AY (2004), Nikolaev AY (2004), Hein MY (2015)	3
EED	1	DNMT3A	17	affinity chromatography technology, imaging technique	Vire E (2006), Vire E (2006)	2
BCL6	6	YY1	7	affinity chromatography technology	Miles RR (2005)	1
BCL6	6	CTBP1	2	pull down, affinity chromatography technology, imaging technique	Mendez LM (2008), Mendez LM (2008), Mendez LM (2008)	3
CHD5	12	MTA2	1	affinity chromatography technology, affinity chromatography technology, biochemical	Quan J (2014), Quan J (2014), Wan C (2015)	3
CTNNB1	30	EP300	36	genetic interference, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study, affinity chromatography technology, genetic interference, affinity chromatography technology	Kennell JA (2003), Sun Y (2000), Sun Y (2000), Sun Y (2000), Saegusa M (2005), Daniels DL (2002), Levy L (2004), Labalette C (2004), Lee YH (2006), Zhao Y (2016)	10
PARP1	3	NFKB1	2	pull down, pull down, affinity chromatography technology, affinity chromatography technology, imaging technique	Hassa PO (2005), Hassa PO (2005), Amiri KI (2006), Amiri KI (2006), Amiri KI (2006)	5
CSNK2A1	15	DDX17	2	enzymatic study	Zhang M (2011)	1
CTNNB1	30	KMT2A	58	affinity chromatography technology, pull down, affinity chromatography technology, pull down	Sierra J (2006), Sierra J (2006), Gomes NP (2006), Gomes NP (2006)	4
MYC	2	PML	7	affinity chromatography technology, affinity chromatography technology, pull down	Cairo S (2005), Buschbeck M (2007), Buschbeck M (2007)	3
HIST1H3A	3	KMT2A	58	pull down, pull down, x-ray crystallography, enzymatic study, unspecified method, enzymatic study, enzymatic study	Chang PY (2010), Chang PY (2010), Wang Z (2010), Shinsky SA (2014), Shinsky SA (2014), Nakamura T (2002), Patel A (2014)	7
ESR1	0	TOP2A	2	affinity chromatography technology	Tarallo R (2011)	1
RBBP7	1	SAP30L	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	3
PML	7	PPARG	0	two hybrid	Ravasi T (2010)	1
TP73	2	DAXX	5	affinity chromatography technology, two hybrid, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology	Kim EJ (2003), Kim EJ (2003), Kim EJ (2003), Gostissa M (2004), Gostissa M (2004), Gostissa M (2004)	6
MBD3	4	HDAC1	4	affinity chromatography technology, biochemical, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Sakai H (2002), Zhang Y (1999), Zhang Y (1999), Saito M (2002), Noh EJ (2009), Noh EJ (2009), Le Guezennec X (2006), Humphrey GW (2001), Sun JM (2007), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hein MY (2015), Huttlin EL (2017)	16
RBBP7	1	SAP130	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
MBD2	1	DNMT1	5	affinity chromatography technology	Tatematsu KI (2000)	1
EZH2	4	EED	1	two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, two hybrid, pull down, pull down, affinity chromatography technology, biochemical, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, imaging technique, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	van Lohuizen M (1998), van Lohuizen M (1998), van Lohuizen M (1998), van der Vlag J (1999), van der Vlag J (1999), van der Vlag J (1999), Denisenko O (1998), Denisenko O (1998), Denisenko O (1998), Denisenko O (1998), Pasini D (2004), Cao R (2004), Su IH (2005), Hansen KH (2008), Margueron R (2008), Margueron R (2008), Shen X (2008), Shen X (2008), Hernandez-Munoz I (2005), Sarma K (2008), Sarma K (2008), Han Z (2007), Avdic V (2011), Kaneko S (2010), Kaneko S (2010), Yap DB (2011), Satijn DP (2001), Satijn DP (2001), Sewalt RG (1998), Sewalt RG (1998), Sewalt RG (1998), Sewalt RG (1998), Wang L (2013), Wu L (2013), Pasini D (2010), Cao Q (2014), Cao Q (2014), Cao Q (2014), Cao Q (2014), Cao Q (2014), Wan C (2015), Hein MY (2015), Hein MY (2015), Chan YS (2013), Zhang H (2016), Zhang H (2016), Wang X (2017), Hauri S (2016), Hauri S (2016)	49
MECP2	36	SPI1	1	affinity chromatography technology, pull down, pull down	Suzuki M (2003), Suzuki M (2003), Suzuki M (2006)	3
BAHD1	3	KDM1A	2	two hybrid	Weimann M (2013)	1
HIST1H2BA	0	BAHD1	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
HELLS	1	WDR5	2	biochemical	Wan C (2015)	1
EP300	36	WDR5	2	affinity chromatography technology	Tang Z (2013)	1
BANP	1	RELA	1	affinity chromatography technology	Singh K (2009)	1
TP53	0	TOP2A	2	affinity chromatography technology, pull down, genetic interference	Cowell IG (2000), Cowell IG (2000), Xie L (2013)	3
CHD5	12	MTA3	3	affinity chromatography technology	Quan J (2014)	1
HDAC1	4	GSE1	14	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	4
ESR1	0	ELMSAN1	4	affinity chromatography technology	Tarallo R (2011)	1
MBD3L1	0	ZBTB2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
HDAC1	4	RREB1	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	3
BRMS1	1	E2F1	0	two hybrid	Meehan WJ (2004)	1
NR0B2	1	HDAC1	4	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Gobinet J (2005), Gobinet J (2005), Kanamaluru D (2011), Miao J (2011), Sanyal S (2007), Sanyal S (2007)	6
SUDS3	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Fleischer TC (2003), Alland L (2002), Joshi P (2013), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	6
DDB1	6	ESR1	0	affinity chromatography technology	Ohtake F (2007)	1
CEBPA	0	NR3C1	2	pull down	Boruk M (1998)	1
GATAD1	0	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Huttlin EL (2015), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	5
MBD3	4	DDX5	2	affinity chromatography technology	Carter CL (2010)	1
CDK2AP1	1	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Spruijt CG (2010), Hein MY (2015), Hauri S (2016)	3
RCOR1	0	KDM1A	2	biochemical, affinity chromatography technology, affinity chromatography technology, pull down, pull down, x-ray crystallography, affinity chromatography technology, pull down, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, biochemical, affinity chromatography technology	Hakimi MA (2002), You A (2001), You A (2001), Gocke CB (2008), Chen Y (2006), Yang M (2006), Shi YJ (2005), Shi YJ (2005), Lee MG (2005), Lee MG (2005), Humphrey GW (2001), Humphrey GW (2001), Zibetti C (2010), Hwang S (2011), Lin Y (2010), Nicholson TB (2011), Nicholson TB (2011), Cui S (2011), Adamo A (2011), Adamo A (2011), Bantscheff M (2011), Mosammaparast N (2013), Lin Y (2010), Wan C (2015), Boldt K (2016)	25
PARK7	0	DAXX	5	two hybrid, affinity chromatography technology	Junn E (2005), Junn E (2005)	2
DAXX	5	MDM2	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method	Ivanchuk SM (2008), Ivanchuk SM (2008), Tang J (2006), Tang J (2006), Tang J (2006), Song MS (2008), Zhao LY (2004), Tang J (2013), Tang J (2013), Zhao LY (2004), Zhang H (2013), Zhang H (2013), Li Z (2017)	13
BCL6	6	BCL11A	14	affinity chromatography technology, pull down, affinity chromatography technology	Miles RR (2005), Liu H (2006), Liu H (2006)	3
SIN3A	13	STAT3	0	affinity chromatography technology, pull down	Icardi L (2012), Icardi L (2012)	2
MYC	2	TP53	0	affinity chromatography technology, fluorescent resonance energy transfe	Agrawal P (2010), Ivanov AA (2017)	2
MTA1	3	IKZF1	2	two hybrid, affinity chromatography technology	Rolland T (2014), Huttlin EL (2017)	2
SAP30	1	SIN3B	5	biochemical, affinity chromatography technology, affinity chromatography technology	Zhang Y (1999), Hein MY (2015), Hein MY (2015)	3
SINHCAF	0	SIN3B	5	affinity chromatography technology	Huttlin EL (2017)	1
DNMT3L	2	E2F4	0	pull down, imaging technique, affinity chromatography technology	Pacaud R (2014), Pacaud R (2014), Pacaud R (2014)	3
PHB2	1	CTNNB1	30	affinity chromatography technology	Ewing RM (2007)	1
KDM5B	27	MTA2	1	affinity chromatography technology	Li Q (2011)	1
MTA2	1	RBBP7	1	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Yao YL (2003), Zhang Y (1999), Feng Q (2001), Wang Y (2009), Fu J (2011), Havugimana PC (2012), Huttlin EL (2015), Huttlin EL (2017), Brasen C (2017), Brasen C (2017), Hauri S (2016)	11
NSD2	9	HIST1H4A	0	enzymatic study	Morishita M (2014)	1
TRIM28	1	TP53	0	enzymatic study, affinity chromatography technology, affinity chromatography technology	Doyle JM (2010), Gilmore-Hebert M (2010), Okamoto K (2006)	3
ING2	0	SUDS3	3	affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Huttlin EL (2017)	2
RBBP7	1	ARID4B	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
PADI4	1	TP53	0	affinity chromatography technology, pull down, pull down, affinity chromatography technology, imaging technique, affinity chromatography technology	Li P (2008), Li P (2008), Li P (2008), Li P (2008), Li P (2008), Li P (2010)	6
TRERF1	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	4
TXNIP	2	RELA	1	affinity chromatography technology	Kwon HJ (2010)	1
SAP30	1	PHF12	6	affinity chromatography technology	Yochum GS (2001)	1
ELMSAN1	4	TRERF1	1	affinity chromatography technology	Hein MY (2015)	1
PARP1	3	UHRF1	3	affinity chromatography technology, pull down	De Vos M (2014), De Vos M (2014)	2
CREBBP	29	AR	3	two hybrid, pull down, pull down, genetic interference, affinity chromatography technology, pull down	Kim J (2005), Fronsdal K (1998), Ishitani K (2003), Aarnisalo P (1998), Andersen RJ (2010), Fronsdal K (1998)	6
MYC	2	HIF1A	1	affinity chromatography technology, affinity chromatography technology, fluorescent resonance energy transfe	Koshiji M (2004), Koshiji M (2004), Ivanov AA (2017)	3
YY1	7	CREBBP	29	affinity chromatography technology, affinity chromatography technology	de Nigris F (2007), de Nigris F (2007)	2
PPARG	0	HDAC1	4	pull down, affinity chromatography technology, affinity chromatography technology	Yoo EJ (2006), Yoo EJ (2006), Pancione M (2010)	3
MTA1	3	EP300	36	affinity chromatography technology	Gururaj AE (2006)	1
CEBPA	0	ESR1	0	pull down	Boruk M (1998)	1
UHRF2	1	GATAD2B	15	affinity chromatography technology	Lai M (2016)	1
ESR1	0	RELA	1	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Olivier S (2006), Nettles KW (2008), Nettles KW (2008), Rubio MF (2006), Rubio MF (2006)	5
TGIF1	1	CTBP1	2	affinity chromatography technology, two hybrid, affinity chromatography technology, two hybrid	Melhuish TA (2000), Melhuish TA (2000), Merrill JC (2010), Rolland T (2014)	4
SIN3B	5	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Romm E (2005), Bantscheff M (2011)	2
UHRF1	3	EZH2	4	affinity chromatography technology, affinity chromatography technology	Babbio F (2012), Babbio F (2012)	2
CDKN1A	1	CEBPA	0	pull down, two hybrid	Timchenko NA (1997), Timchenko NA (1997)	2
HMG20B	2	KDM1A	2	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2002), Hakimi MA (2002), Hakimi MA (2002), Hakimi MA (2003), Shi YJ (2005), Lee MG (2005), Hakimi MA (2002), Bantscheff M (2011), Huttlin EL (2015), Huttlin EL (2017)	10
HIST1H2BA	0	DMAP1	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
HIF1A	1	RUVBL2	4	affinity chromatography technology	Lee JS (2010)	1
PPARD	4	MDM2	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
SINHCAF	0	ING1	2	affinity chromatography technology	Huttlin EL (2017)	1
CHFR	5	HDAC1	4	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study	Oh YM (2009), Oh YM (2009), Oh YM (2009), Oh YM (2009), Oh YM (2009)	5
CTBP1	2	NCOR2	12	affinity chromatography technology	Mendez LM (2008)	1
CTBP1	2	RUNX1	0	affinity chromatography technology	Nitta E (2005)	1
DNMT1	5	PARP1	3	affinity chromatography technology	Cai Y (2014)	1
SMARCA4	19	SMARCA2	17	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Reyes JC (1997), Pal S (2003), Ito T (2008), Ito T (2008), Havugimana PC (2012)	5
EP300	36	PPARG	0	pull down, fluorescent resonance energy transfe, affinity chromatography technology, pull down, two hybrid, fluorescent resonance energy transfe, affinity chromatography technology, pull down, affinity chromatography technology, unspecified method, unspecified method, affinity chromatography technology	Fajas L (2002), Iannone MA (2001), Gelman L (1999), Gelman L (1999), Gelman L (1999), Feige JN (2007), Feige JN (2007), Debril MB (2004), Subbaramaiah K (2012), Lee G (2002), Koppen A (2009), Wang C (2001)	12
BAHD1	3	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Lebreton A (2011), Lebreton A (2011)	2
SMARCA2	17	RBBP7	1	affinity chromatography technology	Nakamura T (2002)	1
TP53	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, imaging technique, affinity chromatography technology, affinity chromatography technology, imaging technique	Ito A (2002), Wang C (2005), Dohi Y (2008), Jin W (2008), Lei Q (2006), Wu Y (2001), Wu Y (2001), Luo J (2000), Juan LJ (2000), Juan LJ (2000), Juan LJ (2000), Murphy M (1999), Insinga A (2004), Sun JM (2007), Yu XY (2010), Sinha S (2010), Sinha S (2010), Li Y (2012), Di Agostino S (2006), Pavithra L (2009), Pavithra L (2009), Luo J (2000), Chen TC (2014), Park EK (2015), Park EK (2015), Park EK (2015)	26
ING1	2	TP53	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Leung KM (2002), Garkavtsev I (1998), Zhu Z (2009)	3
ELMSAN1	4	ZMYM3	0	affinity chromatography technology	Hein MY (2015)	1
SMARCA2	17	SFPQ	2	affinity chromatography technology	Ito T (2008)	1
HDAC2	1	PHB2	1	pull down	Kurtev V (2004)	1
AR	3	TP53	0	genetic interference	Shenk JL (2001)	1
SNAI1	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Peinado H (2004), Peinado H (2004), Lin T (2010), Tong ZT (2012), Tong ZT (2012), Wu ZQ (2012), Hsu DS (2014), Yuan K (2016), Yuan K (2016)	9
DNMT3B	3	CHD4	22	affinity chromatography technology, imaging technique	Cai Y (2014), Cai Y (2014)	2
ESR1	0	PHB2	1	two hybrid, pull down, affinity chromatography technology, pull down, pull down, imaging technique, imaging technique, affinity chromatography technology	Martini PG (2003), Kurtev V (2004), Kurtev V (2004), He B (2008), Martini PG (2000), Yoshimaru T (2013), Yoshimaru T (2013), Kim NH (2015)	8
CTBP1	2	RREB1	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kuppuswamy M (2008), Huttlin EL (2015), Huttlin EL (2017)	3
MTA3	3	MTA2	1	affinity chromatography technology, biochemical	Bantscheff M (2011), Wan C (2015)	2
CHD5	12	MBD3	4	affinity chromatography technology, affinity chromatography technology	Quan J (2014), Quan J (2014)	2
CDYL	1	SMARCA4	19	affinity chromatography technology	Mulligan P (2008)	1
SUDS3	3	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Fleischer TC (2003), Joshi P (2013)	2
PML	7	SMAD2	5	affinity chromatography technology	Lin HK (2004)	1
HELLS	1	DNMT3B	3	affinity chromatography technology, pull down	Myant K (2008), Myant K (2008)	2
MDM2	2	DDX5	2	affinity chromatography technology	Okoro DR (2013)	1
RCOR1	0	HDAC2	1	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2002), You A (2001), You A (2001), Battaglioli E (2002), Humphrey GW (2001), Humphrey GW (2001), Bantscheff M (2011), Joshi P (2013)	8
HDAC2	1	RBBP7	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2003), Adenuga D (2010), Xue Y (1998), Havugimana PC (2012), Bantscheff M (2011), Huttlin EL (2015), Wan C (2015), Huttlin EL (2017), Hauri S (2016)	9
SPI1	1	DNMT3B	3	affinity chromatography technology, pull down	Suzuki M (2006), Suzuki M (2006)	2
RUNX1	0	NCOR2	12	x-ray crystallography	Liu Y (2007)	1
DDB1	6	DNMT1	5	pull down	Yang Y (2015)	1
SINHCAF	0	ARID4A	3	affinity chromatography technology	Huttlin EL (2017)	1
TP53	0	RBBP4	3	affinity chromatography technology	Fogeron ML (2013)	1
GATAD1	0	SUDS3	3	affinity chromatography technology	Varier RA (2016)	1
CUL4B	8	SAP30	1	affinity chromatography technology, affinity chromatography technology	Ji Q (2014), Ji Q (2014)	2
KMT2A	58	HDAC2	1	affinity chromatography technology	Nakamura T (2002)	1
STAT3	0	CDKN1A	1	affinity chromatography technology, imaging technique	Coqueret O (2000), Chen TC (2014)	2
MBD3	4	MTA2	1	affinity chromatography technology, biochemical, pull down, pull down, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical	Sakai H (2002), Zhang Y (1999), Zhang Y (1999), Saito M (2002), Feng Q (2001), Wang Y (2009), Havugimana PC (2012), Wan C (2015)	8
HDAC9	7	PARP1	3	affinity chromatography technology	Hang CT (2010)	1
TP53	0	WDR5	2	pull down, pull down	Dou Y (2005), Tang Z (2013)	2
CHFR	5	PARP1	3	affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology	Kashima L (2012), Kashima L (2012), Ahel I (2008), Oh YM (2009), Liu C (2013), Brodie SA (2015), Brodie SA (2015)	7
EP300	36	RELA	1	enzymatic study, two hybrid, affinity chromatography technology, genetic interference, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kiernan R (2003), Gerritsen ME (1997), Gerritsen ME (1997), Gerritsen ME (1997), Gerritsen ME (1997), Hiroi M (2003), Nicot C (2001), Kim RH (2001), Hassa PO (2008), Hassa PO (2008), Hu J (2004), Naeaer AM (1999), Lee IT (2010), Nehra R (2010), Hsu HC (2007), Hsu HC (2007), Saha RN (2007), Saha RN (2007), Hassa PO (2003), Hassa PO (2003), Mendonca DB (2011), Chen W (2008), Chen LF (2002), OHara A (2014), Lu Y (2013), Lu Y (2013), Ren YB (2015), Chen LF (2005), Chen LF (2005), Chen LF (2005), Deng WG (2003)	31
PCNA	0	HDAC1	4	affinity chromatography technology, pull down, affinity chromatography technology	Milutinovic S (2002), Milutinovic S (2002), Naryzhny SN (2004)	3
CHD5	12	GATAD2A	3	affinity chromatography technology, affinity chromatography technology	Quan J (2014), Huttlin EL (2017)	2
BCL11A	14	MTA2	1	affinity chromatography technology	Cismasiu VB (2005)	1
SIN3A	13	NR0B2	1	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Farhana L (2007), Kemper JK (2004), Kemper JK (2004), Miao J (2011)	4
ING2	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Huttlin EL (2017)	2
CHD4	22	KDM1A	2	affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011)	2
CREBBP	29	SP3	4	affinity chromatography technology	Goto T (2006)	1
STAT3	0	SYK	3	two hybrid, two hybrid	Rolland T (2014), Yu H (2011)	2
GATAD2A	3	MTA1	3	biochemical, affinity chromatography technology	Wan C (2015), Huttlin EL (2017)	2
TAL1	0	RUNX1	0	affinity chromatography technology	Hu X (2009)	1
HDAC1	4	SMARCA4	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, genetic interference	Qiu Z (2008), Battaglioli E (2002), Hang CT (2010), DiRenzo J (2000)	4
E2F1	0	CREBBP	29	two hybrid, pull down	Giangrande PH (2003), Trouche D (1996)	2
NSD2	9	TRIM28	1	affinity chromatography technology	Min DJ (2013)	1
RUNX1T1	1	DNMT1	5	affinity chromatography technology, affinity chromatography technology, imaging technique, two hybrid	Liu S (2005), Liu S (2005), Liu S (2005), Liu S (2005)	4
MYOD1	0	NR2F2	4	pull down	Bailey P (1998)	1
SIN3A	13	RBBP4	3	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hassig CA (1997), Zhang Y (1998), Nakamura T (2002), Pflum MK (2001), Pflum MK (2001), Skowyra D (2001), Bantscheff M (2011), Hauri S (2016)	8
PHF21A	4	RCOR1	0	biochemical, pull down, affinity chromatography technology	Hakimi MA (2002), Iwase S (2004), Boldt K (2016)	3
ZMYM2	5	UBTF	8	affinity chromatography technology	Kasyapa CS (2005)	1
TRIM28	1	MTA2	1	biochemical	Kristensen AR (2012)	1
TP73	2	HIF1A	1	affinity chromatography technology	Amelio I (2015)	1
EP300	36	CCND1	1	pull down, affinity chromatography technology, affinity chromatography technology	Ratineau C (2002), Fu M (2005), Fu M (2005)	3
SINHCAF	0	RBBP4	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Hauri S (2016)	2
UHRF2	1	CTNNB1	30	far western blotting	Mori T (2011)	1
EHMT2	4	WDR5	2	affinity chromatography technology	Hauri S (2016)	1
APPL1	1	HDAC1	4	affinity chromatography technology, pull down, imaging technique	Banach-Orlowska M (2009), Banach-Orlowska M (2009), Chen TC (2014)	3
FOXK2	9	KDM5A	6	affinity chromatography technology	Li X (2015)	1
EED	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	van der Vlag J (1999), van der Vlag J (1999), van der Vlag J (1999), Hein MY (2015)	4
CDKN1A	1	RBBP4	3	two hybrid	Vinayagam A (2011)	1
ZBTB16	4	EZH2	4	affinity chromatography technology, affinity chromatography technology	Vasanthakumar A (2017), Vasanthakumar A (2017)	2
TP53	0	HDAC2	1	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Li P (2010), Insinga A (2004), Sun JM (2007), Tian B (2011), Adenuga D (2010), Brandl A (2012)	6
MDM2	2	SFPQ	2	affinity chromatography technology	Okoro DR (2013)	1
BRMS1L	1	BRMS1	1	affinity chromatography technology	Nikolaev AY (2004)	1
SMARCAD1	1	SIN3A	13	affinity chromatography technology	Rowbotham SP (2011)	1
BCL6	6	SIN3A	13	pull down, affinity chromatography technology, pull down, two hybrid, affinity chromatography technology	Wong CW (1998), Dhordain P (1998), Dhordain P (1998), Dhordain P (1998), Miles RR (2005)	5
ZMYND8	5	MTA1	3	affinity chromatography technology	Hein MY (2015)	1
CSNK2A1	15	KMT2A	58	affinity chromatography technology	Hauri S (2016)	1
KMT2A	58	HDAC1	4	pull down, affinity chromatography technology, affinity chromatography technology	Xia ZB (2003), Xia ZB (2003), Nakamura T (2002)	3
SMARCAD1	1	DDX5	2	affinity chromatography technology	Rowbotham SP (2011)	1
DAXX	5	TOP2B	9	affinity chromatography technology	Hein MY (2015)	1
SFPQ	2	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Tyson-Capper AJ (2009), Dong L (2011), Liu L (2011), Zhong N (2006), Zhong N (2006)	5
NONO	3	PARK7	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang C (2008), Xu J (2005), Xu J (2005)	3
MBD3L1	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
SATB1	1	CHD3	19	affinity chromatography technology, biochemical	Yasui D (2002), Yasui D (2002)	2
PADI4	1	HDAC2	1	affinity chromatography technology, pull down, pull down	Li P (2010), Li P (2010), Li P (2010)	3
MYC	2	KDM5B	27	affinity chromatography technology, affinity chromatography technology	Wong PP (2012), Wong PP (2012)	2
AR	3	KDM1A	2	affinity chromatography technology, bioid	Choi H (2016), Lempiaeinen JK (2017)	2
PHB	0	TP53	0	imaging technique, affinity chromatography technology, pull down	Fusaro G (2003), Fusaro G (2003), Fusaro G (2003)	3
PML	7	CHD4	22	affinity chromatography technology	Morey L (2008)	1
CHD5	12	HDAC1	4	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Quan J (2014), Quan J (2014), Wan C (2015), Huttlin EL (2017)	4
SMARCAD1	1	CHD4	22	affinity chromatography technology	Rowbotham SP (2011)	1
BCL11A	14	NR2F2	4	two hybrid, two hybrid, pull down, affinity chromatography technology	Chan CM (2013), Chan CM (2013), Chan CM (2013), Chan CM (2013)	4
RELA	1	CCND1	1	affinity chromatography technology	Veena MS (2014)	1
PARP1	3	HIF1A	1	affinity chromatography technology	Elser M (2008)	1
HDAC1	4	CHD3	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Tong JK (1998), Tong JK (1998), Kuzmichev A (2002), Sun JM (2007), Terhune SS (2010), Xue Y (1998), Xue Y (1998), Xue Y (1998), Havugimana PC (2012), Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	12
SMARCAD1	1	HELLS	1	affinity chromatography technology	Rowbotham SP (2011)	1
TP53	0	E4F1	3	affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology	Rizos H (2003), Sandy P (2000), Sandy P (2000), Sandy P (2000), Paul C (2006)	5
CUL4B	8	SAP130	2	affinity chromatography technology, affinity chromatography technology, biochemical	Ji Q (2014), Ji Q (2014), Ji Q (2014)	3
DDB1	6	SIN3A	13	affinity chromatography technology, affinity chromatography technology, pull down	Ji Q (2014), Ji Q (2014), Ji Q (2014)	3
CDK2AP1	1	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Spruijt CG (2010), Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Hein MY (2015), Huttlin EL (2017)	6
HIF1A	1	CEBPA	0	imaging technique, imaging technique, pull down, pull down, affinity chromatography technology, affinity chromatography technology	Zhao XY (2011), Zhao XY (2011), Yang L (2008), Yang L (2008), Yang L (2008), Yang L (2008)	6
CUL4B	8	ARID4B	1	affinity chromatography technology, affinity chromatography technology	Ji Q (2014), Ji Q (2014)	2
PML	7	SAP130	2	affinity chromatography technology	McNamara S (2008)	1
MYC	2	CEBPA	0	affinity chromatography technology	Tinel M (2003)	1
CCND1	1	PCNA	0	pull down, affinity chromatography technology, affinity chromatography technology	Matsuoka S (1994), Xiong Y (1993), Zhang H (1993)	3
MBD3L1	0	MBD3	4	two hybrid, two hybrid, pull down, affinity chromatography technology	Jiang CL (2004), Jiang CL (2004), Jiang CL (2004), Jiang CL (2004)	4
HDAC2	1	CHD3	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Hakimi MA (2003), Tong JK (1998), Tong JK (1998), Hakimi MA (2002), Sun JM (2007), Xue Y (1998), Xue Y (1998), Xue Y (1998), Havugimana PC (2012), Joshi P (2013)	10
HDAC2	1	BCL11A	14	affinity chromatography technology	Joshi P (2013)	1
MTA2	1	ESR1	0	pull down, pull down, affinity chromatography technology	Cui Y (2006), Cui Y (2006), Cui Y (2006)	3
PPARD	4	EP300	36	pull down, two hybrid	Cho MC (2006), Mochizuki K (2008)	2
ESR1	0	MDM2	2	pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, two hybrid, pull down	Liu G (2000), Kinyamu HK (2003), Duong V (2007), Duong V (2007), Duong V (2007), Duong V (2007), Saji S (2001), Saji S (2001)	8
CDK2AP1	1	MTA2	1	affinity chromatography technology	Hein MY (2015)	1
HDAC1	4	MYOD1	0	pull down, affinity chromatography technology, pull down, affinity chromatography technology	Puri PL (2001), Puri PL (2001), Mal A (2001), Bruscoli S (2010)	4
MBD3L1	0	MTA3	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
TAL1	0	CHD4	22	affinity chromatography technology	Hu X (2009)	1
PARP1	3	HDAC2	1	affinity chromatography technology, pull down, affinity chromatography technology	Hassa PO (2005), Hassa PO (2005), Hang CT (2010)	3
MBD3L1	0	CDK2AP1	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
DCAF1	5	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Romani B (2016), Romani B (2016)	2
SMARCA4	19	PML	7	imaging technique	Chuang YS (2011)	1
ESR1	0	SERPINB5	0	two hybrid	Arroyo R (2015)	1
HDAC2	1	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical	Hakimi MA (2003), Schmidt DR (1999), Schmidt DR (1999), Tong JK (1998), Tong JK (1998), Tong JK (1998), ONeill DW (2000), Zhang Y (1998), Zhang Y (1998), Xue Y (1998), Xue Y (1998), Xue Y (1998), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015)	17
CUL4B	8	TP53	0	affinity chromatography technology	Thirunavukarasou A (2014)	1
HDAC1	4	2436	0	affinity chromatography technology, affinity chromatography technology, pull down	Li Z (2010), Li Z (2010), Li Z (2010)	3
TP53	0	BCL6	6	pull down	Kotlyar M (2015)	1
HMG20B	2	HMG20A	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid	Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017), Ceballos-Chavez M (2012), Ceballos-Chavez M (2012)	5
MORF4L1	1	RB1	2	pull down, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Leung JK (2001), Leung JK (2001), Pardo PS (2002), Pardo PS (2002), Pardo PS (2002)	5
CTBP1	2	SP1	0	affinity chromatography technology, affinity chromatography technology	Glasspool RM (2005), Glasspool RM (2005)	2
RCOR1	0	HIST1H3A	3	affinity chromatography technology	Lee MG (2005)	1
EED	1	DNMT3B	3	affinity chromatography technology, imaging technique, affinity chromatography technology	Vire E (2006), Vire E (2006), OHagan HM (2011)	3
HDAC1	4	EMSY	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	4
BRMS1	1	ARID4A	3	affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology	Hurst DR (2008), Hurst DR (2006), Meehan WJ (2004), Meehan WJ (2004)	4
EP300	36	SP3	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Goto T (2006), Choi HS (2002), Walker GE (2001)	3
E2F1	0	RBBP4	3	affinity chromatography technology	Nicolas E (2000)	1
EZH2	4	DDX5	2	affinity chromatography technology, affinity chromatography technology	Cao Q (2014), Zhang H (2016)	2
KLF5	4	PARP1	3	affinity chromatography technology, pull down, affinity chromatography technology	Suzuki T (2007), Suzuki T (2007), Suzuki T (2007)	3
EHMT2	4	NR0B2	1	affinity chromatography technology	Miao J (2011)	1
SMARCA4	19	NONO	3	affinity chromatography technology, pull down, affinity chromatography technology	Ito T (2008), Ito T (2008), Tando T (2010)	3
RUNX2	2	CREBBP	29	affinity chromatography technology	Makita N (2008)	1
DNTTIP1	0	KDM1A	2	two hybrid	Weimann M (2013)	1
GATAD1	0	PHF12	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Vermeulen M (2010), Hein MY (2015), Hein MY (2015), Varier RA (2016), Varier RA (2016)	5
DNMT1	5	HDAC1	4	biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Robertson KD (2000), Achour M (2008), Achour M (2008), Kimura H (2003), Zhang Q (2005), Myant K (2008), Schnekenburger M (2007), Kang KA (2012), Cui S (2011), Cui S (2011), Hervouet E (2010), Cai Y (2014), Cai Y (2014), Yuan K (2016), Yuan K (2016)	15
E2F4	0	RBL2	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Iavarone A (1999), Litovchick L (2007), Schmit F (2007), Kong LJ (2006), Farkas T (2002), Osterloh L (2007), Yakovlev VA (2013), Martin N (2012), Martin N (2012)	9
CREBBP	29	CREB1	1	affinity chromatography technology, two hybrid, pull down, x-ray crystallography, pull down, pull down, affinity chromatography technology, fluorescent resonance energy transfe, pull down, pull down, pull down, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, x-ray crystallography, affinity chromatography technology, two hybrid, affinity chromatography technology, far western blotting, pull down, far western blotting, pull down, far western blotting, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Shi Y (2004), Kim J (2005), Shimomura A (1996), Radhakrishnan I (1997), Radhakrishnan I (1997), Sano Y (1998), Sano Y (1998), Zor T (2002), Giebler HA (2000), Zhang Q (2000), Ernst P (2001), Ledo F (2002), Poon SL (2008), Best JL (2004), Best JL (2004), Chan EC (2010), Yang F (2006), Solomou EE (2001), Du K (1998), Venza I (2001), Lundblad JR (1995), Lundblad JR (1995), Arias J (1994), Chrivia JC (1993), Chrivia JC (1993), Shi Y (2004), Ramirez JA (2007), Sun HS (2003), Sun HS (2003), Wang Y (2016)	30
ING1	2	BRMS1	1	affinity chromatography technology	Nikolaev AY (2004)	1
NR3C1	2	RELA	1	affinity chromatography technology, pull down, pull down	Ray A (1994), Nissen RM (2000), Caldenhoven E (1995)	3
ING2	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Doyon Y (2006), Shi X (2006), Binda O (2008), Joshi P (2013), Huttlin EL (2017)	6
CCDC6	3	TRIM28	1	biochemical	Kristensen AR (2012)	1
RUNX1	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Kraemer OH (2008), Shia WJ (2012)	2
KDM1A	2	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Li Q (2011), Cui S (2011), Cui S (2011)	3
DDB1	6	DNMT3B	3	pull down	Yang Y (2015)	1
KDM5A	6	SIN3B	5	affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hein MY (2015)	2
ZNF217	3	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Thillainadesan G (2008), Kuppuswamy M (2008), Joshi P (2013)	3
EZH2	4	TRIM28	1	affinity chromatography technology	Cao Q (2014)	1
KMT2A	58	SAP30	1	affinity chromatography technology	Nakamura T (2002)	1
TP53	0	ING2	0	affinity chromatography technology	Pedeux R (2005)	1
SMARCA2	17	HDAC2	1	biochemical, affinity chromatography technology, affinity chromatography technology	Sif S (2001), Pal S (2003), Nakamura T (2002)	3
SMARCAD1	1	RUVBL2	4	affinity chromatography technology	Rowbotham SP (2011)	1
IKZF1	2	GATAD2A	3	affinity chromatography technology	Huttlin EL (2017)	1
E2F1	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Nicolas E (2000), Zhou F (2008), Peche LY (2015), Peche LY (2015)	4
APPL1	1	RBBP4	3	affinity chromatography technology	Banach-Orlowska M (2009)	1
DDB1	6	SAP130	2	affinity chromatography technology, affinity chromatography technology	Ji Q (2014), Ji Q (2014)	2
EP300	36	TRERF1	1	genetic interference, pull down, affinity chromatography technology	Gizard F (2001), Gizard F (2001), Gizard F (2001)	3
CREBBP	29	STAT3	0	affinity chromatography technology, enzymatic study	Sun Y (2001), Yuan ZL (2005)	2
RUNX2	2	TLE1	6	affinity chromatography technology, imaging technique	Ali SA (2010), Ali SA (2010)	2
HIST1H2BA	0	HMG20A	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CSNK2A1	15	MYC	2	enzymatic study	Channavajhala P (2002)	1
DNMT3B	3	HDAC2	1	affinity chromatography technology, pull down, affinity chromatography technology	Geiman TM (2004), Geiman TM (2004), Cai Y (2014)	3
ING2	0	SIN3A	13	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Doyon Y (2006), Shi X (2006), Huttlin EL (2017)	4
IKZF1	2	GATAD2B	15	affinity chromatography technology	Huttlin EL (2017)	1
MTA2	1	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical	Yao YL (2003), Yao YL (2003), Hakimi MA (2003), Zhang Y (1999), Banach-Orlowska M (2009), Feng Q (2001), Humphrey GW (2001), Humphrey GW (2001), Wang Y (2009), Fu J (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015)	14
MBD3L1	0	MTA1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
EP300	36	YY1	7	enzymatic study, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down	Yao YL (2001), Lee JS (1995), Lee JS (1995), Lee JS (1995), Lee JS (1995), Kadeppagari RK (2009), Kadeppagari RK (2009), Kadeppagari RK (2009), Sankar N (2008), Sankar N (2008), Sankar N (2008), Wang CC (2007), Wang CC (2007), Galvin KM (1997)	14
MYC	2	CHD4	22	affinity chromatography technology	Koch HB (2007)	1
KMT2A	58	HIST1H4A	0	pull down	Chang PY (2010)	1
DNMT3L	2	HDAC1	4	pull down, pull down, pull down, pull down, affinity chromatography technology	Aapola U (2002), Aapola U (2002), Deplus R (2002), Deplus R (2002), Deplus R (2002)	5
TAL1	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Goardon N (2006), Hu X (2009), Hu X (2009)	3
MBD3L1	0	GATAD2B	15	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
TXNIP	2	MTA1	3	affinity chromatography technology	Huttlin EL (2017)	1
E2F4	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ferreira R (1998), Iavarone A (1999), Chen L (2012)	3
PCGF6	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Huttlin EL (2017), Hauri S (2016)	3
CHD3	19	CSNK2A1	15	affinity chromatography technology	Sun JM (2007)	1
CHD5	12	RBBP4	3	affinity chromatography technology	Quan J (2014)	1
NR3C1	2	RCOR1	0	bioid	Lempiaeinen JK (2017)	1
ING2	0	SAP130	2	affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Huttlin EL (2017)	2
FOXK2	9	RCOR1	0	affinity chromatography technology, affinity chromatography technology, biochemical, pull down	Shan L (2016), Shan L (2016), Shan L (2016), Shan L (2016)	4
BANP	1	MDM2	2	pull down, affinity chromatography technology, affinity chromatography technology	Pavithra L (2009), Pavithra L (2009), Adhikary A (2014)	3
HDAC2	1	ELMSAN1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Joshi P (2013), Hein MY (2015)	3
ESR1	0	TOP2B	9	affinity chromatography technology, affinity chromatography technology	Ju BG (2006), Tarallo R (2011)	2
CTBP1	2	EP300	36	affinity chromatography technology, pull down, affinity chromatography technology, pull down	Senyuk V (2005), Kim JH (2005), Kim JH (2005), Kim JH (2005)	4
EED	1	CHD4	22	affinity chromatography technology	Cao Q (2014)	1
ZNF217	3	CTBP1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Banck MS (2009), Cowger JJ (2007), Thillainadesan G (2008), Kuppuswamy M (2008), Kuppuswamy M (2008), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	8
PHB	0	RB1	2	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Wang S (1999), Wang S (1999), Wang S (1999), Gamble SC (2007)	4
SP3	4	SP1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, pull down, affinity chromatography technology, affinity chromatography technology, pull down	Goto T (2006), Goto T (2006), Choi HS (2002), Choi HS (2002), Walker GE (2001), Walker GE (2001), Xu Q (2000), Tang S (2004), Kwon JH (2003), Syddall CM (2013), Syddall CM (2013), Syddall CM (2013)	12
YY1	7	RUVBL2	4	biochemical, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Wu S (2007), Wu S (2007), Wu S (2007), Cai Y (2007), Cai Y (2007), Vella P (2011), Huttlin EL (2017), Hauri S (2016)	8
BCL6	6	MTA3	3	affinity chromatography technology, affinity chromatography technology, pull down, pull down, imaging technique	Fujita N (2004), Fujita N (2004), Fujita N (2004), Fujita N (2004), Parekh S (2007)	5
SAP130	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Fleischer TC (2003), Xue Y (1998), Joshi P (2013)	3
RFX1	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Xu Y (2006), Wang KR (2007), Boldt K (2016)	3
STAT3	0	RELA	1	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yu Z (2002), Yu Z (2002), Yoshida Y (2004), Yoshida Y (2004), Dhar K (2013)	5
MTA2	1	RBBP4	3	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, biochemical, x-ray crystallography, affinity chromatography technology	Yao YL (2003), Zhang Y (1999), Banach-Orlowska M (2009), Pflum MK (2001), Feng Q (2001), Wang Y (2009), Cui S (2011), Havugimana PC (2012), Wan C (2015), Brasen C (2017), Brasen C (2017), Brasen C (2017), Hauri S (2016)	13
SMARCAD1	1	PCNA	0	pull down, fluorescent resonance energy transfe	Rowbotham SP (2011), Rowbotham SP (2011)	2
MDM2	2	SP1	0	affinity chromatography technology, affinity chromatography technology	Zerrouqi A (2012), Zerrouqi A (2012)	2
RB1	2	RBBP7	1	pull down, affinity chromatography technology, pull down, affinity chromatography technology, pull down	Yarden RI (1999), Qian YW (1995), Qian YW (1995), Lai A (2001), Huang S (1991)	5
GATAD1	0	SINHCAF	0	affinity chromatography technology	Varier RA (2016)	1
ESR1	0	STAT3	0	affinity chromatography technology	Wang LH (2001)	1
SAP30	1	HDAC2	1	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1998), Zhang Y (1999), Kuzmichev A (2002), Viiri KM (2006), Lai A (2001), Zhang Y (1998), Zhang Y (1998), Adenuga D (2010), Xue Y (1998), Bantscheff M (2011), Hein MY (2015)	11
SMARCA4	19	SIN3A	13	biochemical, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Sif S (2001), Sif S (2001), Kuzmichev A (2002), Kuzmichev A (2002), Qiu Z (2008), Xu Z (2006), Pal S (2003), Pal S (2003)	8
ING1	2	ESR1	0	pull down	Toyama T (2003)	1
BCL6	6	MBD3	4	affinity chromatography technology, affinity chromatography technology	Fujita N (2004), Fujita N (2004)	2
HDAC1	4	ARID5B	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	3
PPARD	4	RELA	1	affinity chromatography technology	Aarenstrup L (2008)	1
HDAC1	4	RBBP7	1	affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yao YL (2003), Ng HH (1999), Zhang Y (1999), Zhang Y (1997), Banach-Orlowska M (2009), Humphrey GW (2001), Zhang Y (1998), Zhang Y (1998), Xue Y (1998), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Huttlin EL (2015), Wan C (2015), Hein MY (2015), Yeh HH (2015), Yeh HH (2015), Huttlin EL (2017), Hauri S (2016)	19
RBL1	1	PHB	0	pull down, affinity chromatography technology	Wang S (1999), Wang S (1999)	2
AR	3	MDM2	2	affinity chromatography technology, affinity chromatography technology, imaging technique, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zoubeidi A (2007), Gaughan L (2005), Gaughan L (2005), Chymkowitch P (2011), Chymkowitch P (2011), Liu T (2012), Liu T (2012), Deep G (2008), Deep G (2008), Lin HK (2002), Lin HK (2002), Zhang A (2015), Kwegyir-Afful AK (2015), McClurg UL (2016), McClurg UL (2016), Liao Y (2017), Steely AM (2017), Zhai W (2016)	18
ESR1	0	DDX5	2	affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ambrosino C (2010), Ambrosino C (2010), Fujita T (2003), Mooney SM (2010), Tarallo R (2011), Mooney SM (2010)	6
CCDC6	3	HDAC1	4	affinity chromatography technology, pull down, imaging technique, biochemical	Leone V (2010), Leone V (2010), Leone V (2010), Kristensen AR (2012)	4
RBBP7	1	SINHCAF	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016)	3
CDYL	1	EHMT2	4	affinity chromatography technology, pull down, affinity chromatography technology	Mulligan P (2008), Mulligan P (2008), Bantscheff M (2011)	3
SMAD2	5	HDAC2	1	pull down	Miyamoto-Sato E (2010)	1
RBBP4	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (2003), Yao YL (2003), Nicolas E (2001), Nicolas E (2001), Grozinger CM (1999), You A (2001), Hassig CA (1997), Hassig CA (1997), Ng HH (1999), Zhang Y (1999), Zhang Y (2002), Hassig CA (1998), Zhang Y (1997), Banach-Orlowska M (2009), Pflum MK (2001), Pflum MK (2001), Skowyra D (2001), Humphrey GW (2001), Zhang Y (1998), Zhang Y (1998), Sun JM (2007), Sun JM (2007), Karwowska-Desaulniers P (2007), Terhune SS (2010), Xue Y (1998), Xue Y (1998), Cui S (2011), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hein MY (2015), Huttlin EL (2017), Hauri S (2016)	35
HDAC1	4	MTA2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yao YL (2003), Yao YL (2003), You A (2001), Zhang Y (1999), Zhang Y (1999), Yasui D (2002), Banach-Orlowska M (2009), Banach-Orlowska M (2009), Cui Y (2006), Pflum MK (2001), Feng Q (2001), Humphrey GW (2001), Humphrey GW (2001), Humphrey GW (2001), Zhang Y (1998), Terhune SS (2010), Opsahl JA (2010), Wang Y (2009), Cui S (2011), Havugimana PC (2012), Bantscheff M (2011), Joshi P (2013), Kristensen AR (2012), Wan C (2015), Hein MY (2015), Huttlin EL (2017), Boldt K (2016)	27
E2F1	0	SP3	4	affinity chromatography technology, pull down	Rotheneder H (1999), Rotheneder H (1999)	2
SYK	3	HDAC1	4	affinity chromatography technology, affinity chromatography technology, pull down	Wang L (2005), Wang L (2005), Wang L (2005)	3
MBD2	1	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Ng HH (1999), Feng Q (2001), Hauri S (2016)	3
H2AFY	1	HIST1H4A	0	affinity chromatography technology	Sarma K (2014)	1
NFKB1	2	PPARG	0	affinity chromatography technology, pull down	Perez A (2008), Perez A (2008)	2
SIN3A	13	SUDS3	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Fleischer TC (2003), Fleischer TC (2003), Fleischer TC (2003), Alland L (2002), Alland L (2002), Alland L (2002), Huttlin EL (2015), Huttlin EL (2017)	8
KMT2A	58	CHD3	19	affinity chromatography technology	Nakamura T (2002)	1
KLF5	4	CREBBP	29	pull down, two hybrid	Zhang Z (2003), Oishi Y (2008)	2
MORF4L1	1	PHF12	6	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kumar GS (2011), Hayakawa T (2007), Hayakawa T (2010), Sy SM (2009), Rolland T (2014), Huttlin EL (2015), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	9
ZBTB16	4	SIN3A	13	pull down, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, pull down, affinity chromatography technology	David G (1998), David G (1998), David G (1998), David G (1998), Ward JO (2001), Wong CW (1998), Choi WI (2014)	7
PHB	0	ESR1	0	pull down	He B (2008)	1
EP300	36	HIF1A	1	affinity chromatography technology, x-ray crystallography, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, unspecified method, affinity chromatography technology, fluorescent resonance energy transfe, pull down, affinity chromatography technology, affinity chromatography technology, pull down, unspecified method, pull down, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, pull down, pull down	Lando D (2002), Freedman SJ (2002), Lewis MD (2004), Matt T (2004), Sang N (2002), Luo W (2010), Freedman SJ (2003), Bodily JM (2011), Lee YM (2009), Lee YM (2009), Lee YM (2009), Kung AL (2004), Kung AL (2004), Kung AL (2004), Land SC (2007), Zhang Y (2010), Zhang Y (2010), Fath DM (2006), Fath DM (2006), Lee SJ (2013), Wang D (2014), Kaluz S (2006), Kaluz S (2006), Kaluz S (2006), Shin DH (2008), Shin DH (2008), Wang Y (2012), Huang C (2009), Hewitson KS (2002), Cook KM (2009), Cook KM (2009), Hubbi ME (2012), Kim SY (2014), Sang N (2003), Sang N (2003), Sang N (2003), Yasinska IM (2003), Na YR (2013), Na YR (2013), Mendonca DB (2011), Arany Z (1996), Arany Z (1996), Chen R (2012), Li SH (2008), Galbraith MD (2013), Chen Z (2014), Li Q (2012), Geng H (2012), Geng H (2012), Kato H (2004), Lim JH (2010), Kyle HF (2015), Kyle HF (2015), Rath S (2016), Kimura M (2008), Dubey R (2013)	56
PPARG	0	PHB2	1	unspecified method	Lee G (2002)	1
BCL6	6	ZBTB16	4	pull down, two hybrid	Dhordain P (2000), Dhordain P (2000)	2
MYC	2	KDM1A	2	two hybrid	Weimann M (2013)	1
ESR1	0	KDM1A	2	affinity chromatography technology, affinity chromatography technology	Garcia-Bassets I (2007), Garcia-Bassets I (2007)	2
SIN3A	13	PHF12	6	two hybrid, affinity chromatography technology, two hybrid, x-ray crystallography, pull down	Yochum GS (2001), Yochum GS (2001), Yochum GS (2001), Kumar GS (2011), Kumar GS (2011)	5
CDKN1A	1	DDB1	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Abbas T (2008), Abbas T (2008), Nishitani H (2008), Fogeron ML (2013)	4
HDAC1	4	NONO	3	imaging technique, affinity chromatography technology, affinity chromatography technology	Dong X (2007), Liu L (2011), Zhang C (2008)	3
RBBP7	1	CHD5	12	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Quan J (2014), Quan J (2014), Huttlin EL (2017)	4
EP300	36	HIST1H4A	0	enzymatic study, enzymatic study, enzymatic study, enzymatic study, pull down, enzymatic study, enzymatic study, pull down, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, pull down, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, affinity chromatography technology, enzymatic study	Brackertz M (2006), Faiola F (2005), Kalkhoven E (2002), Seo SB (2002), Kim JH (2005), Bordoli L (2001), Kim MY (2001), Kutney SN (2004), Deng L (2001), Wang F (2010), Ghizzoni M (2012), Loven MA (2004), Wong K (2005), Murakami M (2005), Ogryzko VV (1996), Yamaguchi Y (2004), Saha RN (2007), Furumatsu T (2005), An W (2002), Delvecchio M (2013), Dornan D (2003), Ji A (2003), Fu M (2005), Suganuma T (2002), Kim JH (2006), Lopes da Rosa J (2013), Wright DG (2016), Du C (2017), Yi P (2017)	29
FOXK2	9	TP53	0	affinity chromatography technology	Li X (2015)	1
ZBTB16	4	MTA2	1	affinity chromatography technology	Choi WI (2014)	1
BCL11B	3	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology	Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005), Marban C (2007), Joshi P (2013)	7
SP1	0	POU2F1	5	two hybrid, pull down, pull down, pull down, affinity chromatography technology	Stroem AC (1996), Stroem AC (1996), Gunther M (2000), Lim K (2009), Lim K (2009)	5
HDAC1	4	RBL1	1	affinity chromatography technology, affinity chromatography technology, pull down	Lai A (1999), Ferreira R (1998), Ferreira R (1998)	3
YY1	7	SAP30	1	two hybrid, pull down, affinity chromatography technology, affinity chromatography technology	Huang NE (2003), Huang NE (2003), Huang NE (2003), Huang NE (2003)	4
KMT2A	58	SIN3A	13	affinity chromatography technology, affinity chromatography technology	Yokoyama A (2010), Nakamura T (2002)	2
NR3C1	2	HDAC1	4	affinity chromatography technology, affinity chromatography technology, biochemical, fluorescent resonance energy transfe, pull down	Qiu Y (2006), Jee YK (2005), Kristensen AR (2012), Qiu Y (2011), Qiu Y (2011)	5
TP53	0	RBBP7	1	affinity chromatography technology	Fogeron ML (2013)	1
HIST1H2BA	0	CDYL	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
CDK2AP1	1	MBD3	4	affinity chromatography technology, affinity chromatography technology	Spruijt CG (2010), Hein MY (2015)	2
STAT3	0	EP300	36	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Nakashima K (1999), Nakashima K (1999), Ray S (2002), Ray S (2002), Yuan ZL (2005), Yuan ZL (2005), Gupta M (2011), Wang R (2005), Gray MJ (2005), Hou T (2008), Kotla S (2015)	11
HDAC1	4	IKZF1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Koipally J (1999), Koipally J (2002), Kim J (1999), Kim J (1999), Joshi P (2013)	5
POU2F1	5	NR3C1	2	pull down, pull down, pull down, affinity chromatography technology	Prefontaine GG (1999), Wang JM (1999), Prefontaine GG (1998), Prefontaine GG (1998)	4
RUNX2	2	HDAC1	4	affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, genetic interference	Lee HW (2006), Zhang Z (2012), Ali SA (2012), Ali SA (2012), Ali SA (2012)	5
CHD3	19	MBD3	4	biochemical	Havugimana PC (2012)	1
PPARG	0	SFPQ	2	pull down, affinity chromatography technology, two hybrid	Tsukahara T (2013), Tsukahara T (2013), Tsukahara T (2013)	3
SP1	0	NFKB1	2	pull down, affinity chromatography technology, affinity chromatography technology	Sif S (1994), Dhar SK (2006), Liu S (2008)	3
RBBP7	1	FOXK2	9	affinity chromatography technology, affinity chromatography technology, pull down	Huttlin EL (2015), Huttlin EL (2017), Shan L (2016)	3
MYC	2	CDYL	1	affinity chromatography technology	Agrawal P (2010)	1
EHMT2	4	UHRF1	3	imaging technique, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jin W (2010), Kim JK (2009), Kim JK (2009), Zhang J (2011)	4
CREB1	1	HIST1H2BA	0	affinity chromatography technology	Li X (2015)	1
MTA2	1	GATAD2A	3	biochemical, biochemical, affinity chromatography technology	Havugimana PC (2012), Wan C (2015), Huttlin EL (2017)	3
MYOD1	0	SMARCA4	19	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Philipot O (2010), de la Serna IL (2005), Forcales SV (2012)	3
PHF21A	4	KDM1A	2	biochemical, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2002), Iwase S (2004), Hakimi MA (2003), Shi YJ (2005), Lee MG (2005), Boldt K (2016)	6
ARID4A	3	RB1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Lai A (1999), Lai A (1999), Lai A (2001), Lai A (2001), Suryadinata R (2011), Suryadinata R (2011)	6
EED	1	GATAD2B	15	affinity chromatography technology	Cao Q (2014)	1
ESR1	0	MBD2	1	imaging technique	Chatagnon A (2010)	1
NR0B2	1	ESR1	0	two hybrid, pull down, pull down	Seol W (1998), Seol W (1998), Klinge CM (2002)	3
SP1	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Di Padova M (2003), Singh J (2002), Zhang Y (2002), Sun JM (2002), Gao J (2009), Shon JK (2009), Mottet D (2009), Goto T (2006), Hung JJ (2006), Lagger G (2003), Choi HS (2002), Choi HS (2002), Kang JE (2005), Kang JE (2005), Kang JE (2005), Gan Y (2005), Gan Y (2005), Duan H (2005), Varshochi R (2005), Varshochi R (2005), Plaisance V (2005), Walker GE (2001), Walker GE (2001), Ammanamanchi S (2004), Doetzlhofer A (1999), Sekhavat A (2007), Liu T (2007), Enya K (2008), Liu S (2010), Leclerc GJ (2010), Leclerc GJ (2010), Wong CY (2011), Schnur N (2007)	33
TAL1	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Goardon N (2006), Hu X (2009), Hu X (2009)	3
NR2C1	0	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011), Cui S (2011)	3
CREBBP	29	HIST1H4A	0	enzymatic study, enzymatic study, enzymatic study	Perissi V (1999), Pasheva E (2004), Yasuda J (2004)	3
MTA3	3	HDAC2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Fujita N (2003), Bantscheff M (2011), Bantscheff M (2011), Joshi P (2013), Wan C (2015)	5
KDM5A	6	EZH2	4	affinity chromatography technology, affinity chromatography technology	Pasini D (2008), Pasini D (2008)	2
DNMT3L	2	YY1	7	pull down	Pacaud R (2014)	1
EP300	36	ZBTB16	4	affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology	Guidez F (2005), Guidez F (2005), Choi WI (2014), Choi WI (2014)	4
KDM1A	2	ZMYM2	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2003), Gocke CB (2008), Shi YJ (2005), Lee MG (2005)	4
ING2	0	ARID4A	3	affinity chromatography technology, affinity chromatography technology	Doyon Y (2006), Huttlin EL (2017)	2
TRIM28	1	E2F1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Wang C (2007), Hu C (2012), Hu C (2012)	3
CEBPD	0	HDAC1	4	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Lai PH (2008), Turgeon N (2008), Turgeon N (2008), Turgeon N (2008)	4
MBD4	1	UHRF1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down	Meng H (2014), Meng H (2014), Meng H (2014), Meng H (2014), Meng H (2014)	5
GATAD1	0	ARID4B	1	affinity chromatography technology	Varier RA (2016)	1
ESR1	0	NCOR2	12	pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, two hybrid	Smith CL (1997), Fleming FJ (2004), Karmakar S (2010), Karmakar S (2010), Fujita T (2003), Fujita T (2003)	6
GATAD1	0	SAP30L	0	affinity chromatography technology	Varier RA (2016)	1
PARK7	0	CHD4	22	affinity chromatography technology	Opsahl JA (2010)	1
ESR1	0	SIN3B	5	affinity chromatography technology	Zhu P (2006)	1
MBD3	4	GATAD2A	3	pull down, pull down, biochemical, biochemical, affinity chromatography technology	Brackertz M (2002), Gong Z (2006), Havugimana PC (2012), Wan C (2015), Huttlin EL (2017)	5
CREBBP	29	KMT2A	58	pull down, x-ray crystallography, pull down, pull down, affinity chromatography technology, two hybrid, x-ray crystallography, pull down	Goto NK (2002), Goto NK (2002), Ernst P (2001), Ernst P (2001), Ernst P (2001), Ernst P (2001), Yang F (2006), Ramirez JA (2007)	8
H2AFY	1	PARP1	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, imaging technique, affinity chromatography technology, affinity chromatography technology, pull down	Ouararhni K (2006), Nusinow DA (2007), Nusinow DA (2007), Nusinow DA (2007), Chen H (2014), Sarma K (2014), Sarma K (2014), Forst AH (2013)	8
SMARCA2	17	ESR1	0	two hybrid	Ichinose H (1997)	1
NCOR2	12	SAP30	1	biochemical	Underhill C (2000)	1
UBTF	8	TLE1	6	affinity chromatography technology	Ali SA (2010)	1
RELA	1	POU2F1	5	pull down, affinity chromatography technology	van Heel DA (2002), van Heel DA (2002)	2
NR2C1	0	ESR1	0	affinity chromatography technology, pull down	Hu YC (2002), Hu YC (2002)	2
MYC	2	DDB1	6	affinity chromatography technology	Choi SH (2010)	1
OVOL1	2	HDAC1	4	affinity chromatography technology, affinity chromatography technology, imaging technique	Nair M (2007), Nair M (2007), Nair M (2007)	3
MBD3L1	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jiang CL (2004), Huttlin EL (2015), Huttlin EL (2017)	3
MBD2	1	MTA1	3	biochemical	Wan C (2015)	1
RELA	1	SMARCA2	17	imaging technique	Ishizaka A (2012)	1
PCNA	0	MDM2	2	affinity chromatography technology, affinity chromatography technology	Groehler AL (2010), Banks D (2006)	2
UHRF1	3	PML	7	affinity chromatography technology, affinity chromatography technology	Guan D (2012), Guan D (2012)	2
SIN3A	13	ESR1	0	affinity chromatography technology, affinity chromatography technology	Ellison-Zelski SJ (2009), Zhu P (2006)	2
GATAD2B	15	HDAC1	4	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Feng Q (2002), Gong Z (2006), Bantscheff M (2011), Joshi P (2013), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017)	7
ARID4A	3	RBL1	1	affinity chromatography technology	Lai A (1999)	1
NCOR2	12	RELA	1	two hybrid, affinity chromatography technology, two hybrid, two hybrid, pull down, pull down, pull down	Espinosa L (2003), Espinosa L (2003), Lee SK (2000), Lee SK (2000), Lee SK (2000), Lee SK (2000), Hoberg JE (2006)	7
PPARG	0	KLF5	4	affinity chromatography technology, imaging technique, two hybrid	Oishi Y (2008), Oishi Y (2008), Oishi Y (2008)	3
KDM1A	2	GSE1	14	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2003), Lee MG (2005), Bantscheff M (2011)	3
CUL4B	8	DNMT1	5	affinity chromatography technology, affinity chromatography technology, pull down	Yang Y (2015), Yang Y (2015), Yang Y (2015)	3
DDX17	2	EP300	36	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, enzymatic study, affinity chromatography technology	Shin S (2007), Shin S (2007), Shin S (2007), Mooney SM (2010), Mooney SM (2010), Mooney SM (2010)	6
AR	3	SIN3A	13	affinity chromatography technology	Zhu P (2006)	1
SNAI2	0	KDM1A	2	affinity chromatography technology	Wu ZQ (2012)	1
SP1	0	MECP2	36	affinity chromatography technology, affinity chromatography technology	Koch C (2004), Hwang CK (2010)	2
SIN3A	13	SAP130	2	affinity chromatography technology, affinity chromatography technology, biochemical	Fleischer TC (2003), Fleischer TC (2003), Wan C (2015)	3
CTNNB1	30	NONO	3	affinity chromatography technology, affinity chromatography technology	Sato S (2005), Sato S (2005)	2
HDAC1	4	CCND1	1	affinity chromatography technology, imaging technique, affinity chromatography technology	Fu M (2005), Fu M (2005), Batra S (2010)	3
RB1	2	SPI1	1	pull down	Hagemeier C (1993)	1
SAP30	1	SINHCAF	0	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Huttlin EL (2017)	2
MTA2	1	SIN3A	13	affinity chromatography technology, affinity chromatography technology	Yao YL (2003), Pflum MK (2001)	2
SP1	0	MYC	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Gartel AL (2001), Liu T (2007), Gordan JD (2007), Gordan JD (2007), Koshiji M (2005), Koshiji M (2005)	6
E4F1	3	CSNK2A1	15	affinity chromatography technology	Huttlin EL (2017)	1
NR3C1	2	PPARG	0	affinity chromatography technology	Nie M (2005)	1
ZMYND8	5	CHD4	22	affinity chromatography technology	Hein MY (2015)	1
EED	1	SIN3A	13	affinity chromatography technology	Cao Q (2014)	1
MDM2	2	RUVBL2	4	unspecified method	Nicholson J (2014)	1
MTA3	3	HMG20B	2	affinity chromatography technology	Bantscheff M (2011)	1
EP300	36	RUVBL2	4	pull down	Karmakar S (2010)	1
RUNX1	0	EP300	36	affinity chromatography technology, enzymatic study	Aikawa Y (2006), Yamaguchi Y (2004)	2
CDKN1A	1	RBL2	5	affinity chromatography technology	Fogeron ML (2013)	1
BCL3	2	EP300	36	two hybrid, pull down	Na SY (1999), Na SY (1999)	2
CDK2AP1	1	ZBTB2	1	affinity chromatography technology	Hein MY (2015)	1
HDAC2	1	MIER1	2	affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Joshi P (2013)	2
HIST1H3A	3	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method	Wysocka J (2006), Nishioka K (2002), Tagami H (2004), Foltz DR (2009), Millard CJ (2016)	5
E2F1	0	NFKB1	2	pull down	Kundu M (1997)	1
MDM2	2	DDX17	2	affinity chromatography technology	Shin S (2007)	1
MECP2	36	SIN3A	13	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Jones PL (1998), Jones PL (1998), Nan X (1998), Nan X (1998), Yu F (2000), Martinowich K (2003), Klose RJ (2004), Gonzales ML (2012)	8
RERE	9	EHMT2	4	affinity chromatography technology, pull down	Wang L (2008), Wang L (2008)	2
HDAC1	4	HMG20A	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Bantscheff M (2011), Joshi P (2013), Hein MY (2015), Hein MY (2015), Huttlin EL (2017)	5
SNAI1	1	CREBBP	29	affinity chromatography technology, affinity chromatography technology	Hsu DS (2014), Hsu DS (2014)	2
SAP30	1	ING1	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kuzmichev A (2002), Kuzmichev A (2002), Kuzmichev A (2002), Kuzmichev A (2002), Kuzmichev A (2002), Skowyra D (2001), Nikolaev AY (2004), Nikolaev AY (2004), Hein MY (2015)	9
PHB	0	SMARCA2	17	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Wang S (2002), Wang S (2002), Wang S (2004), Wang S (2004)	4
HDAC2	1	SMAD7	1	affinity chromatography technology, affinity chromatography technology	Simonsson M (2005), Laganiere J (2005)	2
KDM1A	2	EP300	36	affinity chromatography technology	Garcia-Bassets I (2007)	1
CDK2AP1	1	HMG20A	0	affinity chromatography technology	Hein MY (2015)	1
HIST1H3A	3	HDAC1	4	affinity chromatography technology, pull down, affinity chromatography technology	Nishioka K (2002), Li X (2014), Hein MY (2015)	3
ZMYND8	5	RBBP7	1	affinity chromatography technology	Hein MY (2015)	1
DDB1	6	DCAF1	5	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, x-ray crystallography, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Jin J (2006), Jin J (2006), Ahn J (2010), Maddika S (2009), Maddika S (2009), McCall CM (2008), McCall CM (2008), Hrecka K (2007), Hrecka K (2007), Le Rouzic E (2007), Le Rouzic E (2007), Olma MH (2009), Pham TN (2011), Gerard FC (2014), Nakagawa T (2015), Wan C (2015), Kyei GB (2015), Cassiday PA (2015), Gao J (2015), Gao J (2015), Wu Y (2016), Wu Y (2016), Wang H (2017), Zhou X (2016), Zhou X (2016), Wang X (2017)	26
GATAD1	0	MTA2	1	affinity chromatography technology	Hein MY (2015)	1
ESR1	0	CDKN1A	1	pull down, pull down, pull down, affinity chromatography technology	Fritah A (2005), Maynadier M (2008), Maynadier M (2008), Kinyamu HK (2003)	4
UHRF2	1	CCND1	1	far western blotting, affinity chromatography technology, affinity chromatography technology, pull down, enzymatic study	Mori T (2011), Mori T (2011), Mori T (2011), Mori T (2011), Mori T (2011)	5
SP1	0	SIN3A	13	affinity chromatography technology	Plaisance V (2005)	1
CDK2AP1	1	GATAD2A	3	affinity chromatography technology, affinity chromatography technology	Hein MY (2015), Huttlin EL (2017)	2
WDR5	2	MYC	2	affinity chromatography technology	Carugo A (2016)	1
PHF21A	4	BANP	1	two hybrid	Rolland T (2014)	1
DNMT3A	17	RB1	2	pull down	Fuks F (2001)	1
PCGF6	0	WDR5	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Gao Z (2012), Gao Z (2012), Huttlin EL (2015), Huttlin EL (2017), Hauri S (2016), Hauri S (2016)	6
KLF5	4	CTNNB1	30	affinity chromatography technology, affinity chromatography technology	McConnell BB (2009), McConnell BB (2009)	2
MYOD1	0	PHB	0	affinity chromatography technology	Philipot O (2010)	1
MORF4L1	1	SIN3B	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2010), Sy SM (2009), Huttlin EL (2015), Huttlin EL (2017)	5
SPI1	1	DNMT3A	17	affinity chromatography technology, pull down	Suzuki M (2006), Suzuki M (2006)	2
NR3C1	2	SMARCA4	19	affinity chromatography technology, pull down, biochemical, affinity chromatography technology, bioid	Hsiao PW (2003), Wallberg AE (2000), Reyes JC (1997), Xu R (2007), Lempiaeinen JK (2017)	5
PCGF6	0	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2017), Hauri S (2016)	2
CREBBP	29	MYC	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, pull down, enzymatic study	de Nigris F (2007), de Nigris F (2007), Vervoorts J (2003), Vervoorts J (2003), Vervoorts J (2003), Vervoorts J (2003), Vervoorts J (2003)	7
MORF4L1	1	KDM5A	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hayakawa T (2007), Hayakawa T (2007), Hayakawa T (2007), Huttlin EL (2015), Huttlin EL (2017)	5
FOXK2	9	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical	Ji Z (2014), Huttlin EL (2017), Shan L (2016), Shan L (2016), Shan L (2016)	5
DDX5	2	HDAC2	1	affinity chromatography technology, affinity chromatography technology	Mooney SM (2010), Mooney SM (2010)	2
EP300	36	MDM2	2	pull down, affinity chromatography technology, biochemical, pull down, pull down, enzymatic study, affinity chromatography technology, biochemical, enzymatic study	Grossman SR (1998), Grossman SR (1998), Grossman SR (1998), Grossman SR (1998), Matt T (2004), Wang X (2004), Gillotin S (2010), Kobet E (2000), Nihira NT (2017)	9
MBD3	4	RBBP4	3	pull down, affinity chromatography technology, biochemical, affinity chromatography technology	Zhang Y (1999), Cui S (2011), Havugimana PC (2012), Hauri S (2016)	4
BCL3	2	KDM1A	2	affinity chromatography technology	Keutgens A (2010)	1
SMARCA4	19	CHFR	5	affinity chromatography technology, affinity chromatography technology, enzymatic study	Jung I (2012), Jung I (2012), Jung I (2012)	3
GATAD2B	15	CHD5	12	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Quan J (2014), Huttlin EL (2017)	3
CREBBP	29	CREM	1	pull down	Laurance ME (1997)	1
TRIM28	1	HIST1H3A	3	imaging technique	Li X (2010)	1
MYOD1	0	RB1	2	pull down, pull down, affinity chromatography technology	Mal A (2001), Gu W (1993), Gu W (1993)	3
NR2C1	0	KDM1A	2	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cui S (2011), Cui S (2011), Cui S (2011)	3
DDX17	2	DDX5	2	affinity chromatography technology, affinity chromatography technology, biochemical, two hybrid, two hybrid, biochemical, affinity chromatography technology	Mooney SM (2010), Mooney SM (2010), Havugimana PC (2012), Hegele A (2012), Hegele A (2012), Kristensen AR (2012), Huttlin EL (2017)	7
PPARD	4	NCOR2	12	two hybrid, affinity chromatography technology, pull down	Shi Y (2002), Shi Y (2002), Lim HJ (2004)	3
DNMT1	5	RBBP7	1	affinity chromatography technology, affinity chromatography technology	Marin TL (2017), Marin TL (2017)	2
FOXK2	9	SUDS3	3	affinity chromatography technology	Li X (2015)	1
ESR1	0	SMAD2	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Matsuda T (2001), Ito I (2010), Ito I (2010), Ito I (2010)	4
PHF12	6	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yochum GS (2001), Joshi P (2013), Hein MY (2015), Hein MY (2015), Varier RA (2016), Huttlin EL (2017)	6
MTA3	3	MBD2	1	affinity chromatography technology, biochemical	Bantscheff M (2011), Wan C (2015)	2
PARK7	0	RBBP7	1	affinity chromatography technology	Opsahl JA (2010)	1
BCL11A	14	CHD4	22	affinity chromatography technology	Cismasiu VB (2005)	1
EHMT2	4	DNMT1	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Esteve PO (2006), Esteve PO (2006), Cai Y (2014)	3
BCL6	6	NCOR2	12	two hybrid, pull down, pull down, pull down, x-ray crystallography, two hybrid, imaging technique, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, imaging technique, pull down, imaging technique, imaging technique, affinity chromatography technology	Huynh KD (2000), Wong CW (1998), Deltour S (1999), Ahmad KF (2003), Ahmad KF (2003), Ahmad KF (2003), Ahmad KF (2003), Melnick A (2002), Polo JM (2004), Fujita N (2004), Miles RR (2005), Dhordain P (1997), Dhordain P (1997), Dhordain P (1997), Hatzi K (2013), Hatzi K (2013), Xu F (2016), Xu F (2016)	18
HDAC1	4	TCP1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Terhune SS (2010), Hein MY (2015), Huttlin EL (2017)	3
RELA	1	SP3	4	affinity chromatography technology	Beauchef G (2012)	1
BCL11B	3	MBD3	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down	Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005)	4
ESR1	0	NONO	3	pull down	Nalvarte I (2010)	1
TRIM28	1	SMARCA4	19	affinity chromatography technology	Seki Y (2010)	1
RB1	2	SMARCA4	19	affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology	Dunaief JL (1994), Reyes JC (1997), Qiu Z (2008), Dasgupta P (2004), Zhang HS (2000), Zhang HS (2000), Napolitano MA (2007), Dunaief JL (2002), Tu Z (2013)	9
HDAC2	1	SIN3A	13	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology	Zhang Y (2003), Fleischer TC (2003), Fleischer TC (2003), Hakimi MA (2003), Yang L (2003), Laherty CD (1997), Zhang Y (2002), Tong JK (1998), Zhang Y (2005), Nakamura T (2002), Sekhavat A (2007), Zou J (2004), Sun JM (2007), Xue Y (1998), Tsai SC (2002), Brandl A (2012), Bantscheff M (2011), Joshi P (2013), Wan C (2015), Hsu DS (2014)	20
UHRF1	3	DNMT3A	17	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Meilinger D (2009), Meilinger D (2009), Felle M (2011), Zhang J (2011)	4
BCL11B	3	CHD4	22	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Cismasiu VB (2005), Cismasiu VB (2005), Cismasiu VB (2005)	3
UHRF1	3	HIST1H3A	3	unspecified method, enzymatic study, bioid	Zhang J (2011), Karagianni P (2008), Lambert JP (2015)	3
EZH2	4	AR	3	affinity chromatography technology	Cao Q (2014)	1
RUNX1	0	SPI1	1	pull down	Mao S (1999)	1
SMAD7	1	MYC	2	affinity chromatography technology, affinity chromatography technology	Kim TA (2013), Kim TA (2013)	2
BRMS1	1	SIN3B	5	affinity chromatography technology, affinity chromatography technology	Meehan WJ (2004), Meehan WJ (2004)	2
EZH2	4	CHD4	22	biochemical	Wan C (2015)	1
RB1	2	RBBP4	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology	Nicolas E (2001), Qian YW (1995), Nicolas E (2000), Nicolas E (2000), Lai A (2001), OConnor MD (2011), Qian YW (1993), Qian YW (1993), Qian YW (1993)	9
NKX3-2	1	SIN3A	13	affinity chromatography technology	Kim DW (2003)	1
RB1	2	E2F1	0	affinity chromatography technology, affinity chromatography technology, pull down, two hybrid, pull down, affinity chromatography technology, pull down, two hybrid, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, pull down, affinity chromatography technology, pull down, affinity chromatography technology, x-ray crystallography, pull down, two hybrid, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, pull down, pull down, pull down, affinity chromatography technology, affinity chromatography technology	Nicolas E (2001), Pardo PS (2002), Choubey D (1996), Fajas L (2000), Dyson N (1993), Dyson N (1993), Wu CL (1995), Taniura H (1998), Dai Y (2003), Fedele M (2006), Fedele M (2006), Brown VD (2002), De Blasio A (2005), Chau CM (2008), Dasgupta P (2004), Yang L (2011), Kruetzfeldt M (2005), Harbour JW (1999), Lee SJ (1998), Gao D (2009), Delston RB (2011), Gupta K (2000), Sdek P (2004), Flemington EK (1993), Chang YH (2012), Inoue Y (2007), Inoue Y (2007), Inoue Y (2007), Liu X (2006), Moberg K (1996), Knudsen ES (1996), Brown VD (1999), Brown VD (1999), Whitaker LL (1998), Whitaker LL (1998), Hagemeier C (1993), Bhat UG (1999), Xiao B (2003), Xiao B (2003), Vidal M (1996), Markham D (2006), Markham D (2006), Ianari A (2009), Ianari A (2009), Dhillon NK (2002), Knudsen ES (1997), Knudsen ES (1997), Gery S (2004), Gery S (2004), Kashuba E (2008), Kashuba E (2008), Pearson A (1997), Ginsberg D (1994), Welch PJ (1995), Wang J (2009), Aoki I (2012), Trimarchi JM (1998), Kumari A (2015), Gamell C (2017), Chen TT (2000), Chen TT (2000), Chen TT (2000), Chen TT (2000)	63
STAT3	0	RUNX2	2	affinity chromatography technology	Fan D (2007)	1
RBBP7	1	KDM5A	6	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
E2F1	0	CDKN1A	1	imaging technique	Devgan V (2005)	1
SFPQ	2	SP1	0	affinity chromatography technology	Tyson-Capper AJ (2009)	1
AR	3	SFPQ	2	affinity chromatography technology, pull down	Dong X (2007), Dong X (2007)	2
STAT3	0	HDAC1	4	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique	Zhang Q (2005), Yuan ZL (2005), Gupta M (2011), Zhi Y (2012), Zhi Y (2012)	5
E2F1	0	SP1	0	affinity chromatography technology, pull down, affinity chromatography technology, pull down, pull down, pull down, pull down	Lin SY (1996), Lin SY (1996), Rotheneder H (1999), Rotheneder H (1999), Karlseder J (1996), Karlseder J (1996), Doetzlhofer A (1999)	7
TP73	2	RB1	2	affinity chromatography technology	Ozaki T (2003)	1
SMAD7	1	MYOD1	0	two hybrid	Colland F (2004)	1
SP1	0	HIF1A	1	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, pull down, imaging technique	To KK (2006), To KK (2006), Sanchez-Elsner T (2002), Sanchez-Elsner T (2002), Koshiji M (2005), Koshiji M (2005)	6
CCND1	1	TP73	2	pull down	Gaiddon C (2003)	1
SMARCA4	19	ESR1	0	two hybrid, pull down	Ichinose H (1997), DiRenzo J (2000)	2
HDAC2	1	GSE1	14	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hakimi MA (2003), Bantscheff M (2011), Joshi P (2013)	3
NR2F2	4	HDAC1	4	pull down, pull down, genetic interference	Smirnov DA (2000), Smirnov DA (2000), Smirnov DA (2000)	3
PML	7	CSNK2A1	15	affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, enzymatic study	Rabellino A (2012), Stehmeier P (2009), Hung MS (2010), Hung MS (2010), Scaglioni PP (2006)	5
CREB1	1	CREM	1	affinity chromatography technology, affinity chromatography technology	Srivastava V (2012), Li X (2015)	2
HDAC1	4	ZNF217	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Joshi P (2013), Hein MY (2015), Huttlin EL (2017)	3
MYC	2	TCP1	0	affinity chromatography technology	Koch HB (2007)	1
SINHCAF	0	SAP30L	0	affinity chromatography technology	Huttlin EL (2017)	1
HMG20A	0	MBD2	1	affinity chromatography technology	Hein MY (2015)	1
SAP30	1	RBBP4	3	affinity chromatography technology, pull down, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Zhang Y (1998), Zhang Y (1998), Zhang Y (1999), Kuzmichev A (2002), Lai A (2001), Zhang Y (1998), Zhang Y (1998), Hauri S (2016)	8
TAL1	0	RBBP7	1	affinity chromatography technology	Hu X (2009)	1
MBD3L1	0	GATAD2A	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
TP73	2	KDM1A	2	affinity chromatography technology	Tsai WW (2008)	1
CHD5	12	MTA1	3	affinity chromatography technology, biochemical	Quan J (2014), Wan C (2015)	2
KMT2A	58	RBBP7	1	affinity chromatography technology	Nakamura T (2002)	1
CEBPA	0	HDAC2	1	affinity chromatography technology	Duan H (2005)	1