PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000494318	[[76320148, 76320199], [76398019, 76398051], [76402323, 76402443], [76407639, 76407731], [76439194, 76439369]]	None
ENST00000396419	[[76320176, 76320199], [76402323, 76402443], [76459821, 76459916], [76463622, 76463729], [76465276, 76465341]]	None
ENST00000354370	[[76320270, 76320397], [76402323, 76402443], [76456045, 76456214], [76459821, 76459916], [76463622, 76463729], [76465276, 76465432], [76468216, 76468304], [76470752, 76470905], [76471035, 76471272], [76472578, 76472701], [76476209, 76476562]]	[[76456068, 76456214], [76459821, 76459916], [76463622, 76463729], [76465276, 76465432], [76468216, 76468304], [76470752, 76470905], [76471035, 76471272], [76472578, 76472701], [76476209, 76476331]]
ENST00000396423	[[76452103, 76452315], [76456045, 76456214], [76459821, 76459916], [76463622, 76463729], [76465276, 76465432], [76468216, 76468304], [76470752, 76470905], [76471035, 76471272], [76472578, 76472701], [76476209, 76479078]]	[[76452227, 76452315], [76456045, 76456214], [76459821, 76459916], [76463622, 76463729], [76465276, 76465432], [76468216, 76468304], [76470752, 76470905], [76471035, 76471272], [76472578, 76472701], [76476209, 76476331]]
NM_001330561	[[76319904, 76320199], [76398019, 76398051], [76402323, 76402443], [76456045, 76456214], [76459821, 76459916], [76463622, 76463729], [76465276, 76465432], [76468216, 76468304], [76470752, 76470905], [76471035, 76471272], [76472578, 76472701], [76476209, 76479078]]	[[76456068, 76456214], [76459821, 76459916], [76463622, 76463729], [76465276, 76465432], [76468216, 76468304], [76470752, 76470905], [76471035, 76471272], [76472578, 76472701], [76476209, 76476331]]
NM_004133	[[76452202, 76452315], [76456045, 76456214], [76459821, 76459916], [76463622, 76463729], [76465276, 76465432], [76468216, 76468304], [76470752, 76470905], [76471035, 76471272], [76472578, 76472701], [76476209, 76479069]]	[[76452227, 76452315], [76456045, 76456214], [76459821, 76459916], [76463622, 76463729], [76465276, 76465432], [76468216, 76468304], [76470752, 76470905], [76471035, 76471272], [76472578, 76472701], [76476209, 76476331]]

Promoter

Chrom	Start	End	Description
chr8	76319850	76319870	CAGE_peak_4_at_HNF4G_5end
chr8	76319876	76319926	CAGE_peak_1_at_HNF4G_5end
chr8	76452097	76452126	CAGE_peak_2_at_HNF4G_5end
chr8	76452129	76452159	CAGE_peak_5_at_HNF4G_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I075552	75552281	75555529	0.46	[{'connected_gene': 'HNF4G', 'score': 4.2}, {'connected_gene': 'GC08M075604', 'score': 0.23}, {'connected_gene': 'GC08P075474', 'score': 0.18}]
chr8	GH08I075575	75575120	75575916	0.31	[{'connected_gene': 'HNF4G', 'score': 4.26}, {'connected_gene': 'GC08M075604', 'score': 0.29}, {'connected_gene': 'GC08P075474', 'score': 0.15}]
chr8	GH08I075538	75538481	75543828	0.88	[{'connected_gene': 'HNF4G', 'score': 554.23}, {'connected_gene': 'GC08M075604', 'score': 0.21}, {'connected_gene': 'GC08P075474', 'score': 0.2}]
chr8	GH08I075425	75425676	75428459	0.4	[{'connected_gene': 'HNF4G', 'score': 4.45}, {'connected_gene': 'GC08M075436', 'score': 0.39}]
chr8	GH08I075402	75402146	75413626	1.9	[{'connected_gene': 'HNF4G', 'score': 557.28}, {'connected_gene': 'GC08M075436', 'score': 0.29}]
chr8	GH08I075418	75418419	75423346	0.92	[{'connected_gene': 'HNF4G', 'score': 5.19}, {'connected_gene': 'GC08M075436', 'score': 0.37}]
chr8	GH08I075483	75483297	75484873	0.69	[{'connected_gene': 'GC08P075474', 'score': 0.44}, {'connected_gene': 'HNF4G', 'score': 0.18}, {'connected_gene': 'GC08M075604', 'score': 0.13}]
chr8	GH08I075455	75455581	75462842	0.68	[{'connected_gene': 'GC08P075474', 'score': 0.37}, {'connected_gene': 'GC08M075436', 'score': 0.34}, {'connected_gene': 'HNF4G', 'score': 0.23}]
chr8	GH08I075475	75475185	75475726	0.31	[{'connected_gene': 'GC08P075474', 'score': 550.77}, {'connected_gene': 'HNF4G', 'score': 0.2}, {'connected_gene': 'GC08M075604', 'score': 0.12}]
chr8	GH08I075530	75530465	75530758	0.22	[{'connected_gene': 'GC08P075474', 'score': 0.22}, {'connected_gene': 'GC08M075604', 'score': 0.18}, {'connected_gene': 'HNF4G', 'score': 0.13}]
chr8	GH08I075502	75502772	75504296	0.49	[{'connected_gene': 'GC08P075474', 'score': 0.31}, {'connected_gene': 'HNF4G', 'score': 0.15}, {'connected_gene': 'GC08M075604', 'score': 0.15}]