Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000546500 [[54673976, 54674606], [54675169, 54675286], [54675578, 54675725], [54675873, 54676084], [54676177, 54676270], [54676356, 54676449], [54676583, 54676658], [54677595, 54677751], [54678041, 54678101], [54678332, 54680871]] [[54674591, 54674606], [54675169, 54675286], [54675578, 54675725], [54675873, 54676084], [54676177, 54676270], [54676356, 54676449], [54676583, 54676658], [54677595, 54677751], [54678041, 54678097]]
ENST00000547708 [[54674531, 54674606], [54675169, 54675286], [54675578, 54675725], [54675873, 54675922], [54676583, 54676658], [54677595, 54677662]] [[54674591, 54674606], [54675169, 54675286], [54675578, 54675725], [54675873, 54675922], [54676583, 54676658], [54677595, 54677662]]
ENST00000547566 [[54674531, 54674606], [54675169, 54675286], [54675578, 54675725], [54675873, 54676084], [54676177, 54676270], [54676356, 54676449], [54676583, 54676658], [54677595, 54677751], [54678041, 54678101], [54680445, 54680516], [54680736, 54680872]] [[54674591, 54674606], [54675169, 54675286], [54675578, 54675725], [54675873, 54676084], [54676177, 54676270], [54676356, 54676449], [54676583, 54676658], [54677595, 54677751], [54678041, 54678097]]
ENST00000547870 [[54674532, 54674606], [54675169, 54675725], [54675873, 54676084], [54676177, 54676256]] None
ENST00000340913 [[54674538, 54674606], [54675169, 54675286], [54675578, 54675725], [54675873, 54676084], [54676177, 54676270], [54676356, 54676449], [54676583, 54676658], [54676862, 54677018], [54677595, 54677751], [54678041, 54678101], [54678332, 54678998]] [[54674591, 54674606], [54675169, 54675286], [54675578, 54675725], [54675873, 54676084], [54676177, 54676270], [54676356, 54676449], [54676583, 54676658], [54676862, 54677018], [54677595, 54677751], [54678041, 54678097]]
ENST00000551702 [[54674546, 54674606], [54675169, 54675286], [54675873, 54676084], [54676177, 54676270]] [[54674591, 54674606], [54675169, 54675286], [54675873, 54676084], [54676177, 54676270]]
ENST00000330752 [[54674558, 54674606], [54675169, 54675286], [54675578, 54675725], [54675873, 54676084], [54676177, 54676270], [54676356, 54676453], [54676626, 54676658], [54677595, 54677751], [54678041, 54678101], [54678332, 54678665]] [[54674591, 54674606], [54675169, 54675286], [54675578, 54675725], [54675873, 54676084], [54676177, 54676270], [54676356, 54676453], [54676626, 54676658], [54677595, 54677751], [54678041, 54678097]]
ENST00000547276 [[54674563, 54674606], [54675169, 54675286], [54675578, 54675725], [54675873, 54676084], [54676177, 54676270], [54676356, 54676380], [54677610, 54677751], [54678041, 54678101], [54678332, 54679035]] [[54674591, 54674606], [54675169, 54675286], [54675578, 54675725], [54675873, 54676084], [54676177, 54676270], [54676356, 54676380], [54677610, 54677751], [54678041, 54678097]]
ENST00000548688 [[54674789, 54674878], [54675169, 54675286], [54675578, 54675725], [54675873, 54676084], [54676177, 54676270], [54676356, 54676410]] [[54674806, 54674878], [54675169, 54675286], [54675578, 54675725], [54675873, 54676084], [54676177, 54676270], [54676356, 54676410]]
ENST00000550994 [[54674969, 54675079], [54675169, 54675286], [54675578, 54675725], [54675873, 54676068]] [[54675581, 54675725], [54675873, 54676068]]
ENST00000550482 [[54675981, 54676084], [54676177, 54676270], [54676356, 54676449], [54676583, 54676658], [54677595, 54677751], [54678041, 54678353]] [[54675981, 54676084], [54676177, 54676270], [54676356, 54676449], [54676583, 54676658], [54677595, 54677751], [54678041, 54678097]]
ENST00000551679 [[54677506, 54677751], [54678041, 54678155]] None
ENST00000551665 [[54679690, 54680516], [54680736, 54680835]] None
ENST00000551803 [[54679730, 54679896], [54680445, 54680516], [54680736, 54680871]] None
NM_002136 [[54674473, 54674606], [54675169, 54675286], [54675578, 54675725], [54675873, 54676084], [54676177, 54676270], [54676356, 54676449], [54676583, 54676658], [54677595, 54677751], [54678041, 54678101], [54678332, 54679030]] [[54674591, 54674606], [54675169, 54675286], [54675578, 54675725], [54675873, 54676084], [54676177, 54676270], [54676356, 54676449], [54676583, 54676658], [54677595, 54677751], [54678041, 54678097]]
NM_031157 [[54674473, 54674606], [54675169, 54675286], [54675578, 54675725], [54675873, 54676084], [54676177, 54676270], [54676356, 54676449], [54676583, 54676658], [54676862, 54677018], [54677595, 54677751], [54678041, 54678101], [54678332, 54679030]] [[54674591, 54674606], [54675169, 54675286], [54675578, 54675725], [54675873, 54676084], [54676177, 54676270], [54676356, 54676449], [54676583, 54676658], [54676862, 54677018], [54677595, 54677751], [54678041, 54678097]]
NR_135167 [[54674473, 54674606], [54675169, 54675286], [54675578, 54675725], [54675873, 54676084], [54676177, 54676270], [54676356, 54676449], [54676583, 54676658], [54677595, 54677751], [54678041, 54678101], [54680445, 54680516], [54680736, 54680872]] None
Promoter
Chrom Start End Description
chr12 54674482 54674520 CAGE_peak_1_at_HNRNPA1_5end
chr12 54679672 54679702 CAGE_peak_2_at_HNRNPA1_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr12 GH12I053320 53320232 53322543 2.12 [{'connected_gene': 'AAAS', 'score': 596.07}, {'connected_gene': 'PIR33338', 'score': 550.77}, {'connected_gene': 'GC12M053328', 'score': 550.77}, {'connected_gene': 'GC12M053329', 'score': 550.77}, {'connected_gene': 'PIR38393', 'score': 550.77}, {'connected_gene': 'ESPL1', 'score': 32.16}, {'connected_gene': 'SP1', 'score': 25.07}, {'connected_gene': 'PCBP2', 'score': 22.4}, {'connected_gene': 'MAP3K12', 'score': 20.26}, {'connected_gene': 'ENSG00000258344', 'score': 19.08}, {'connected_gene': 'ZNF740', 'score': 18.83}, {'connected_gene': 'HNRNPA1', 'score': 13.85}, {'connected_gene': 'C12orf10', 'score': 12.42}, {'connected_gene': 'PFDN5', 'score': 12.39}, {'connected_gene': 'SP7', 'score': 12.29}, {'connected_gene': 'RARG', 'score': 11.29}, {'connected_gene': 'ENSG00000257808', 'score': 11.03}, {'connected_gene': 'AMHR2', 'score': 10.85}, {'connected_gene': 'ITGB7', 'score': 10.84}, {'connected_gene': 'CBX5', 'score': 10.82}, {'connected_gene': 'MFSD5', 'score': 10.55}, {'connected_gene': 'TARBP2', 'score': 10.13}, {'connected_gene': 'NPFF', 'score': 10.12}, {'connected_gene': 'LOC100652999', 'score': 9.8}, {'connected_gene': 'SOAT2', 'score': 9.78}, {'connected_gene': 'IGFBP6', 'score': 9.68}, {'connected_gene': 'ATP5MC2', 'score': 5.76}, {'connected_gene': 'GC12M053303', 'score': 0.77}, {'connected_gene': 'PIR50020', 'score': 0.39}]
chr12 GH12I053824 53824773 53826426 1.17 [{'connected_gene': 'AAAS', 'score': 26.0}, {'connected_gene': 'ZNF740', 'score': 24.37}, {'connected_gene': 'TARBP2', 'score': 23.89}, {'connected_gene': 'HNRNPA1', 'score': 21.79}, {'connected_gene': 'CSAD', 'score': 20.4}, {'connected_gene': 'MAP3K12', 'score': 14.91}, {'connected_gene': 'ENSG00000258344', 'score': 13.33}, {'connected_gene': 'SP1', 'score': 11.82}, {'connected_gene': 'ATF7', 'score': 11.55}, {'connected_gene': 'ENSG00000257808', 'score': 11.49}, {'connected_gene': 'PCBP2', 'score': 11.28}, {'connected_gene': 'CBX5', 'score': 11.16}, {'connected_gene': 'ENSG00000257596', 'score': 10.54}, {'connected_gene': 'NPFF', 'score': 10.09}, {'connected_gene': 'LOC100652999', 'score': 9.95}, {'connected_gene': 'LOC100240735', 'score': 4.36}, {'connected_gene': 'RN7SKP289', 'score': 0.44}, {'connected_gene': 'GC12P053834', 'score': 0.44}]
chr12 GH12I053498 53498110 53503102 2.31 [{'connected_gene': 'MAP3K12', 'score': 572.18}, {'connected_gene': 'TARBP2', 'score': 550.77}, {'connected_gene': 'ENSG00000270175', 'score': 550.77}, {'connected_gene': 'ATF7', 'score': 54.76}, {'connected_gene': 'HNRNPA1', 'score': 50.22}, {'connected_gene': 'ZNF740', 'score': 48.42}, {'connected_gene': 'PCBP2', 'score': 40.85}, {'connected_gene': 'SP1', 'score': 38.51}, {'connected_gene': 'ENSG00000258344', 'score': 32.58}, {'connected_gene': 'AAAS', 'score': 30.21}, {'connected_gene': 'CBX5', 'score': 22.14}, {'connected_gene': 'LOC100652999', 'score': 21.76}, {'connected_gene': 'PRR13', 'score': 21.35}, {'connected_gene': 'CSAD', 'score': 21.07}, {'connected_gene': 'CALCOCO1', 'score': 20.5}, {'connected_gene': 'ATP5MC2', 'score': 17.46}, {'connected_gene': 'RARG', 'score': 14.3}, {'connected_gene': 'SPRYD3', 'score': 13.96}, {'connected_gene': 'IGFBP6', 'score': 13.31}, {'connected_gene': 'ENSG00000257605', 'score': 11.97}, {'connected_gene': 'COPZ1', 'score': 11.64}, {'connected_gene': 'EIF4B', 'score': 11.62}, {'connected_gene': 'PFDN5', 'score': 11.3}, {'connected_gene': 'TNS2', 'score': 11.08}, {'connected_gene': 'ENSG00000260470', 'score': 9.7}]
chr12 GH12I054392 54392664 54394706 1.48 [{'connected_gene': 'GPR84', 'score': 15.88}, {'connected_gene': 'GTSF1', 'score': 14.18}, {'connected_gene': 'ITGA5', 'score': 13.5}, {'connected_gene': 'ZNF385A', 'score': 12.01}, {'connected_gene': 'MIR148B', 'score': 10.98}, {'connected_gene': 'HNRNPA1', 'score': 10.87}, {'connected_gene': 'RNU6-950P', 'score': 10.74}, {'connected_gene': 'COPZ1', 'score': 10.71}, {'connected_gene': 'TARBP2', 'score': 10.39}, {'connected_gene': 'NCKAP1L', 'score': 4.72}, {'connected_gene': 'GC12P054401', 'score': 0.44}, {'connected_gene': 'ENSG00000258086', 'score': 0.28}, {'connected_gene': 'LOC102724050', 'score': 0.26}]
chr12 GH12I053294 53294424 53300934 2.3 [{'connected_gene': 'PFDN5', 'score': 550.77}, {'connected_gene': 'PIR44034', 'score': 550.77}, {'connected_gene': 'PIR39957', 'score': 550.77}, {'connected_gene': 'C12orf10', 'score': 550.77}, {'connected_gene': 'ESPL1', 'score': 48.18}, {'connected_gene': 'AAAS', 'score': 32.97}, {'connected_gene': 'ZNF740', 'score': 21.32}, {'connected_gene': 'ATP5MC2', 'score': 12.98}, {'connected_gene': 'ENSG00000257605', 'score': 12.66}, {'connected_gene': 'MFSD5', 'score': 11.47}, {'connected_gene': 'SP1', 'score': 11.36}, {'connected_gene': 'ITGB7', 'score': 11.23}, {'connected_gene': 'ENSG00000257808', 'score': 11.06}, {'connected_gene': 'HNRNPA1', 'score': 10.76}, {'connected_gene': 'PCBP2', 'score': 10.6}, {'connected_gene': 'TARBP2', 'score': 10.45}, {'connected_gene': 'ENSG00000258344', 'score': 10.32}, {'connected_gene': 'SOAT2', 'score': 10.32}, {'connected_gene': 'AMHR2', 'score': 9.6}, {'connected_gene': 'IGFBP6', 'score': 9.42}]
chr12 GH12I053674 53674796 53680173 2.62 [{'connected_gene': 'ATP5MC2', 'score': 591.57}, {'connected_gene': 'GC12P053677', 'score': 550.77}, {'connected_gene': 'SP1', 'score': 28.86}, {'connected_gene': 'ATF7', 'score': 20.58}, {'connected_gene': 'AAAS', 'score': 18.55}, {'connected_gene': 'ENSG00000257808', 'score': 10.97}, {'connected_gene': 'PCBP2', 'score': 10.58}, {'connected_gene': 'ZNF740', 'score': 10.39}, {'connected_gene': 'ENSG00000258344', 'score': 10.32}, {'connected_gene': 'RARG', 'score': 10.31}, {'connected_gene': 'ENSG00000260470', 'score': 10.3}, {'connected_gene': 'HNRNPA1', 'score': 10.28}, {'connected_gene': 'EIF4B', 'score': 9.79}, {'connected_gene': 'MAP3K12', 'score': 1.46}, {'connected_gene': 'CALCOCO1', 'score': 1.37}, {'connected_gene': 'CSAD', 'score': 1.2}, {'connected_gene': 'GC12M053723', 'score': 0.25}]
chr12 GH12I054549 54549001 54550596 1.58 [{'connected_gene': 'PDE1B', 'score': 555.18}, {'connected_gene': 'ENSG00000258344', 'score': 14.8}, {'connected_gene': 'ATF7', 'score': 11.56}, {'connected_gene': 'PPP1R1A', 'score': 10.9}, {'connected_gene': 'HNRNPA1', 'score': 10.01}, {'connected_gene': 'ENSG00000257596', 'score': 9.79}, {'connected_gene': 'GTSF1', 'score': 9.43}]
chr12 GH12I053452 53451377 53454486 2.14 [{'connected_gene': 'PCBP2', 'score': 596.82}, {'connected_gene': 'SP1', 'score': 44.53}, {'connected_gene': 'AAAS', 'score': 42.79}, {'connected_gene': 'ZNF740', 'score': 33.53}, {'connected_gene': 'ENSG00000258344', 'score': 31.76}, {'connected_gene': 'C12orf10', 'score': 30.33}, {'connected_gene': 'MAP3K12', 'score': 28.45}, {'connected_gene': 'HNRNPA1', 'score': 26.81}, {'connected_gene': 'ATF7', 'score': 20.79}, {'connected_gene': 'CBX5', 'score': 16.29}, {'connected_gene': 'AMHR2', 'score': 13.1}, {'connected_gene': 'CSAD', 'score': 12.05}, {'connected_gene': 'TARBP2', 'score': 11.67}, {'connected_gene': 'COPZ1', 'score': 11.64}, {'connected_gene': 'EIF4B', 'score': 11.62}, {'connected_gene': 'NPFF', 'score': 11.16}, {'connected_gene': 'ENSG00000257808', 'score': 11.0}, {'connected_gene': 'PRR13', 'score': 10.72}, {'connected_gene': 'LOC100652999', 'score': 10.61}, {'connected_gene': 'PFDN5', 'score': 10.07}, {'connected_gene': 'ENSG00000257379', 'score': 0.39}, {'connected_gene': 'PCBP2-OT1', 'score': 0.39}]
chr12 GH12I054291 54291189 54303034 2.71 [{'connected_gene': 'NFE2', 'score': 552.92}, {'connected_gene': 'HNRNPA1', 'score': 26.95}, {'connected_gene': 'RNU6-950P', 'score': 14.07}, {'connected_gene': 'MIR148B', 'score': 12.68}, {'connected_gene': 'GPR84', 'score': 12.46}, {'connected_gene': 'ZNF385A', 'score': 10.95}, {'connected_gene': 'FLJ12825', 'score': 7.32}, {'connected_gene': 'GTSF1', 'score': 6.67}, {'connected_gene': 'AAAS', 'score': 4.92}, {'connected_gene': 'COPZ1', 'score': 0.77}, {'connected_gene': 'ENSG00000258344', 'score': 0.34}]
chr12 GH12I054367 54367908 54372770 1.41 [{'connected_gene': 'MIR148B', 'score': 11.97}, {'connected_gene': 'MAP3K12', 'score': 11.62}, {'connected_gene': 'ENSG00000260470', 'score': 11.38}, {'connected_gene': 'CBX5', 'score': 11.21}, {'connected_gene': 'ITGA5', 'score': 10.95}, {'connected_gene': 'GPR84', 'score': 6.43}, {'connected_gene': 'FLJ12825', 'score': 5.64}, {'connected_gene': 'ZNF385A', 'score': 5.27}, {'connected_gene': 'HNRNPA1', 'score': 5.08}, {'connected_gene': 'ENSG00000258086', 'score': 0.37}, {'connected_gene': 'LOC102724050', 'score': 0.37}]
chr12 GH12I054373 54373145 54377699 1.16 [{'connected_gene': 'MIR148B', 'score': 12.02}, {'connected_gene': 'RNU6-950P', 'score': 11.13}, {'connected_gene': 'COPZ1', 'score': 11.1}, {'connected_gene': 'ITGA5', 'score': 10.96}, {'connected_gene': 'ZNF385A', 'score': 6.7}, {'connected_gene': 'HOXC12', 'score': 5.9}, {'connected_gene': 'HNRNPA1', 'score': 5.13}, {'connected_gene': 'GPR84', 'score': 0.39}, {'connected_gene': 'ENSG00000258086', 'score': 0.34}, {'connected_gene': 'LOC102724050', 'score': 0.34}]
chr12 GH12I053971 53971821 54008664 2.82 [{'connected_gene': 'HOXC11', 'score': 559.87}, {'connected_gene': 'HOXC9', 'score': 555.62}, {'connected_gene': 'HOXC6', 'score': 555.15}, {'connected_gene': 'HOXC10', 'score': 553.5}, {'connected_gene': 'GC12P054010', 'score': 550.77}, {'connected_gene': 'GC12P054044', 'score': 550.77}, {'connected_gene': 'MIR196A2', 'score': 550.77}, {'connected_gene': 'HNRNPA1', 'score': 65.29}, {'connected_gene': 'ZNF740', 'score': 61.89}, {'connected_gene': 'ENSG00000258344', 'score': 51.35}, {'connected_gene': 'ATF7', 'score': 48.41}, {'connected_gene': 'PCBP2', 'score': 44.23}, {'connected_gene': 'MAP3K12', 'score': 41.97}, {'connected_gene': 'LOC100652999', 'score': 40.66}, {'connected_gene': 'SP1', 'score': 36.3}, {'connected_gene': 'CALCOCO1', 'score': 30.73}, {'connected_gene': 'AAAS', 'score': 29.63}, {'connected_gene': 'HOTAIR', 'score': 21.61}, {'connected_gene': 'HOXC4', 'score': 20.46}, {'connected_gene': 'CBX5', 'score': 19.84}, {'connected_gene': 'HOXC8', 'score': 17.52}, {'connected_gene': 'HOXC12', 'score': 15.13}, {'connected_gene': 'HOXC-AS1', 'score': 15.08}, {'connected_gene': 'HOXC13', 'score': 13.58}, {'connected_gene': 'EIF4B', 'score': 13.2}, {'connected_gene': 'RARG', 'score': 11.97}, {'connected_gene': 'HOXC13-AS', 'score': 11.72}, {'connected_gene': 'IGFBP6', 'score': 11.27}, {'connected_gene': 'HOXC5', 'score': 11.22}, {'connected_gene': 'MIR615', 'score': 11.17}, {'connected_gene': 'CSAD', 'score': 10.36}, {'connected_gene': 'NPFF', 'score': 10.31}, {'connected_gene': 'ENSG00000257808', 'score': 9.82}, {'connected_gene': 'TARBP2', 'score': 9.76}, {'connected_gene': 'PFDN5', 'score': 9.7}, {'connected_gene': 'ENSG00000270175', 'score': 5.5}, {'connected_gene': 'ATP5MC2', 'score': 2.67}, {'connected_gene': 'PIR41189', 'score': 0.77}, {'connected_gene': 'ENSG00000273049', 'score': 0.77}, {'connected_gene': 'HOXC-AS3', 'score': 0.77}, {'connected_gene': 'GC12P054094', 'score': 0.77}, {'connected_gene': 'GC12P053988', 'score': 0.77}, {'connected_gene': 'HOXC-AS2', 'score': 0.44}, {'connected_gene': 'GC12P054014', 'score': 0.39}, {'connected_gene': 'GC12P054099', 'score': 0.39}, {'connected_gene': 'GC12P054098', 'score': 0.39}, {'connected_gene': 'GC12P053975', 'score': 0.37}]
chr12 GH12I054051 54051141 54055893 2.01 [{'connected_gene': 'HOXC4', 'score': 561.51}, {'connected_gene': 'AAAS', 'score': 31.14}, {'connected_gene': 'ATF7', 'score': 28.82}, {'connected_gene': 'RARG', 'score': 22.78}, {'connected_gene': 'HNRNPA1', 'score': 19.48}, {'connected_gene': 'ENSG00000260470', 'score': 18.41}, {'connected_gene': 'PCBP2', 'score': 14.92}, {'connected_gene': 'HOTAIR', 'score': 14.57}, {'connected_gene': 'SP1', 'score': 14.57}, {'connected_gene': 'IGFBP6', 'score': 13.28}, {'connected_gene': 'ENSG00000258344', 'score': 12.27}, {'connected_gene': 'HOXC5', 'score': 11.51}, {'connected_gene': 'HOXC6', 'score': 11.45}, {'connected_gene': 'PFDN5', 'score': 11.25}, {'connected_gene': 'MIR196A2', 'score': 11.23}, {'connected_gene': 'HOXC-AS3', 'score': 11.23}, {'connected_gene': 'HOXC10', 'score': 11.23}, {'connected_gene': 'HOXC8', 'score': 11.16}, {'connected_gene': 'HOXC-AS1', 'score': 11.01}, {'connected_gene': 'HOXC-AS2', 'score': 11.0}, {'connected_gene': 'HOXC9', 'score': 11.0}, {'connected_gene': 'LOC102724030', 'score': 10.94}, {'connected_gene': 'SMUG1', 'score': 10.9}, {'connected_gene': 'CBX5', 'score': 10.52}, {'connected_gene': 'LOC100652999', 'score': 10.43}, {'connected_gene': 'HOXC13', 'score': 10.42}, {'connected_gene': 'HOXC13-AS', 'score': 10.42}, {'connected_gene': 'HOXC11', 'score': 10.22}, {'connected_gene': 'ZNF740', 'score': 10.21}, {'connected_gene': 'FLJ12825', 'score': 7.19}, {'connected_gene': 'GC12P054078', 'score': 0.39}, {'connected_gene': 'PIR31123', 'score': 0.39}]
chr12 GH12I054009 54009200 54034991 3.17 [{'connected_gene': 'HOXC4', 'score': 558.95}, {'connected_gene': 'HOXC6', 'score': 555.05}, {'connected_gene': 'HOXC5', 'score': 552.94}, {'connected_gene': 'PIR59985', 'score': 550.77}, {'connected_gene': 'GC12P054093', 'score': 550.77}, {'connected_gene': 'PIR46464', 'score': 550.77}, {'connected_gene': 'PIR59725', 'score': 550.77}, {'connected_gene': 'PIR53546', 'score': 550.77}, {'connected_gene': 'GC12P054071', 'score': 550.77}, {'connected_gene': 'AAAS', 'score': 31.93}, {'connected_gene': 'ATF7', 'score': 29.85}, {'connected_gene': 'HNRNPA1', 'score': 26.25}, {'connected_gene': 'RARG', 'score': 22.78}, {'connected_gene': 'ENSG00000260470', 'score': 18.38}, {'connected_gene': 'ZNF740', 'score': 16.54}, {'connected_gene': 'HOXC8', 'score': 15.25}, {'connected_gene': 'SMUG1', 'score': 14.63}, {'connected_gene': 'PCBP2', 'score': 13.83}, {'connected_gene': 'IGFBP6', 'score': 13.28}, {'connected_gene': 'SP1', 'score': 13.16}, {'connected_gene': 'HOXC-AS1', 'score': 12.94}, {'connected_gene': 'CBX5', 'score': 12.87}, {'connected_gene': 'ENSG00000258344', 'score': 12.83}, {'connected_gene': 'ENSG00000270175', 'score': 12.05}, {'connected_gene': 'CSAD', 'score': 12.01}, {'connected_gene': 'COPZ1', 'score': 11.45}, {'connected_gene': 'PFDN5', 'score': 11.25}, {'connected_gene': 'MAP3K12', 'score': 10.91}, {'connected_gene': 'FLJ12825', 'score': 7.56}, {'connected_gene': 'HOXC9', 'score': 6.88}, {'connected_gene': 'LINC02381', 'score': 5.62}, {'connected_gene': 'ATP5MC2', 'score': 2.82}, {'connected_gene': 'HOXC10', 'score': 2.25}, {'connected_gene': 'PIR45911', 'score': 0.77}, {'connected_gene': 'PIR33391', 'score': 0.77}, {'connected_gene': 'PIR50530', 'score': 0.77}, {'connected_gene': 'PIR57300', 'score': 0.77}, {'connected_gene': 'GC12M054068', 'score': 0.77}, {'connected_gene': 'PIR46275', 'score': 0.77}, {'connected_gene': 'GC12M054069', 'score': 0.77}, {'connected_gene': 'ENSG00000260597', 'score': 0.77}, {'connected_gene': 'PIR60886', 'score': 0.77}, {'connected_gene': 'ENSG00000273046', 'score': 0.77}, {'connected_gene': 'PIR54946', 'score': 0.77}, {'connected_gene': 'PIR48298', 'score': 0.44}, {'connected_gene': 'PIR34386', 'score': 0.44}, {'connected_gene': 'GC12P054063', 'score': 0.44}, {'connected_gene': 'GC12M054067', 'score': 0.44}, {'connected_gene': 'GC12P054097', 'score': 0.44}, {'connected_gene': 'PIR34718', 'score': 0.44}, {'connected_gene': 'PIR54432', 'score': 0.44}, {'connected_gene': 'PIR33335', 'score': 0.44}, {'connected_gene': 'PIR59819', 'score': 0.44}, {'connected_gene': 'GC12P054054', 'score': 0.39}, {'connected_gene': 'GC12P054096', 'score': 0.39}, {'connected_gene': 'MIR615', 'score': 0.39}, {'connected_gene': 'GC12P054099', 'score': 0.37}, {'connected_gene': 'ENSG00000273049', 'score': 0.28}]
chr12 GH12I053664 53664314 53665072 0.84 [{'connected_gene': 'HNRNPA1', 'score': 95.32}, {'connected_gene': 'ZNF740', 'score': 93.51}, {'connected_gene': 'AAAS', 'score': 80.36}, {'connected_gene': 'ATF7', 'score': 79.73}, {'connected_gene': 'TARBP2', 'score': 49.66}, {'connected_gene': 'ENSG00000258344', 'score': 43.29}, {'connected_gene': 'CSAD', 'score': 37.99}, {'connected_gene': 'SP1', 'score': 33.58}, {'connected_gene': 'ATP5MC2', 'score': 32.41}, {'connected_gene': 'PCBP2', 'score': 32.12}, {'connected_gene': 'CBX5', 'score': 30.88}, {'connected_gene': 'LOC100652999', 'score': 30.58}, {'connected_gene': 'ENSG00000257808', 'score': 27.75}, {'connected_gene': 'RARG', 'score': 22.8}, {'connected_gene': 'IGFBP6', 'score': 21.4}, {'connected_gene': 'PFDN5', 'score': 21.24}, {'connected_gene': 'CALCOCO1', 'score': 19.81}, {'connected_gene': 'NPFF', 'score': 18.73}, {'connected_gene': 'ENSG00000260470', 'score': 18.3}, {'connected_gene': 'MAP3K12', 'score': 14.95}, {'connected_gene': 'TNS2', 'score': 11.06}, {'connected_gene': 'ENSG00000257596', 'score': 10.53}, {'connected_gene': 'EIF4B', 'score': 9.79}, {'connected_gene': 'GC12P053677', 'score': 0.39}, {'connected_gene': 'GC12P053639', 'score': 0.31}]
chr12 GH12I054160 54160549 54162428 0.94 [{'connected_gene': 'ZNF740', 'score': 45.18}, {'connected_gene': 'ATF7', 'score': 40.58}, {'connected_gene': 'HNRNPA1', 'score': 37.2}, {'connected_gene': 'PCBP2', 'score': 32.02}, {'connected_gene': 'ENSG00000258344', 'score': 30.07}, {'connected_gene': 'LOC100652999', 'score': 27.91}, {'connected_gene': 'MAP3K12', 'score': 24.84}, {'connected_gene': 'AAAS', 'score': 21.65}, {'connected_gene': 'TARBP2', 'score': 21.35}, {'connected_gene': 'CALCOCO1', 'score': 20.61}, {'connected_gene': 'RARG', 'score': 20.52}, {'connected_gene': 'CBX5', 'score': 19.57}, {'connected_gene': 'SP1', 'score': 14.57}, {'connected_gene': 'ENSG00000260470', 'score': 10.65}, {'connected_gene': 'ENSG00000257596', 'score': 9.87}, {'connected_gene': 'PFDN5', 'score': 9.7}, {'connected_gene': 'SMUG1', 'score': 8.12}, {'connected_gene': 'ENSG00000257534', 'score': 0.77}, {'connected_gene': 'GC12P054155', 'score': 0.44}, {'connected_gene': 'LOC102724030', 'score': 0.39}, {'connected_gene': 'GC12M054122', 'score': 0.37}]
chr12 GH12I054256 54256778 54263698 2.02 [{'connected_gene': 'CBX5', 'score': 550.37}, {'connected_gene': 'GPR84', 'score': 11.35}, {'connected_gene': 'COPZ1', 'score': 11.28}, {'connected_gene': 'RNU6-950P', 'score': 11.24}, {'connected_gene': 'MIR148B', 'score': 10.69}, {'connected_gene': 'HNRNPA1', 'score': 5.24}, {'connected_gene': 'ENSG00000257534', 'score': 4.84}, {'connected_gene': 'FLJ12825', 'score': 4.4}, {'connected_gene': 'SMUG1', 'score': 4.25}, {'connected_gene': 'RN7SL390P', 'score': 0.77}, {'connected_gene': 'ENSG00000257596', 'score': 0.77}]
chr12 GH12I054277 54277514 54284616 2.32 [{'connected_gene': 'CBX5', 'score': 581.8}, {'connected_gene': 'HNRNPA1', 'score': 579.5}, {'connected_gene': 'SP1', 'score': 45.26}, {'connected_gene': 'PCBP2', 'score': 44.75}, {'connected_gene': 'MAP3K12', 'score': 32.59}, {'connected_gene': 'AAAS', 'score': 32.57}, {'connected_gene': 'ENSG00000258344', 'score': 30.79}, {'connected_gene': 'COPZ1', 'score': 23.77}, {'connected_gene': 'ATF7', 'score': 19.81}, {'connected_gene': 'TARBP2', 'score': 12.77}, {'connected_gene': 'GPR84', 'score': 12.29}, {'connected_gene': 'RNU6-950P', 'score': 12.09}, {'connected_gene': 'NPFF', 'score': 11.72}, {'connected_gene': 'HOXC6', 'score': 10.69}, {'connected_gene': 'HOXC4', 'score': 10.61}, {'connected_gene': 'HOXC9', 'score': 10.59}, {'connected_gene': 'HOXC8', 'score': 10.19}, {'connected_gene': 'LOC100652999', 'score': 9.74}, {'connected_gene': 'PFDN5', 'score': 9.7}, {'connected_gene': 'FLJ12825', 'score': 5.94}, {'connected_gene': 'GTSF1', 'score': 4.49}, {'connected_gene': 'ENSG00000257596', 'score': 0.37}, {'connected_gene': 'NFE2', 'score': 0.34}]
chr12 GH12I054323 54323730 54332044 2.3 [{'connected_gene': 'COPZ1', 'score': 550.31}, {'connected_gene': 'ENSG00000258344', 'score': 22.07}, {'connected_gene': 'SP1', 'score': 21.24}, {'connected_gene': 'PCBP2', 'score': 20.04}, {'connected_gene': 'ATF7', 'score': 19.54}, {'connected_gene': 'HOXC8', 'score': 19.28}, {'connected_gene': 'HOXC9', 'score': 19.03}, {'connected_gene': 'HNRNPA1', 'score': 18.75}, {'connected_gene': 'ENSG00000258086', 'score': 13.8}, {'connected_gene': 'TARBP2', 'score': 13.59}, {'connected_gene': 'HOXC5', 'score': 12.57}, {'connected_gene': 'GPR84', 'score': 12.44}, {'connected_gene': 'HOXC6', 'score': 10.68}, {'connected_gene': 'HOXC4', 'score': 10.6}, {'connected_gene': 'ITGA5', 'score': 10.19}, {'connected_gene': 'NPFF', 'score': 10.06}, {'connected_gene': 'LOC100652999', 'score': 9.92}, {'connected_gene': 'GC12P054329', 'score': 0.77}, {'connected_gene': 'GC12M054318', 'score': 0.39}, {'connected_gene': 'RNU6-950P', 'score': 0.39}]
chr12 GH12I053368 53368802 53374470 1.8 [{'connected_gene': 'SP1', 'score': 39.92}, {'connected_gene': 'AAAS', 'score': 26.86}, {'connected_gene': 'CSAD', 'score': 16.34}, {'connected_gene': 'TARBP2', 'score': 13.69}, {'connected_gene': 'ZNF740', 'score': 13.48}, {'connected_gene': 'ENSG00000258344', 'score': 13.3}, {'connected_gene': 'ENSG00000270175', 'score': 12.48}, {'connected_gene': 'HNRNPA1', 'score': 12.18}, {'connected_gene': 'ENSG00000257808', 'score': 11.53}, {'connected_gene': 'ATF7', 'score': 11.53}, {'connected_gene': 'PCBP2', 'score': 11.4}, {'connected_gene': 'NPFF', 'score': 10.15}, {'connected_gene': 'LOC100652999', 'score': 10.01}, {'connected_gene': 'PFDN5', 'score': 9.57}, {'connected_gene': 'PRR13', 'score': 9.37}, {'connected_gene': 'ITGB7', 'score': 1.82}, {'connected_gene': 'SP7', 'score': 0.31}]
chr12 GH12I054354 54354713 54361290 1.9 [{'connected_gene': 'SP1', 'score': 52.63}, {'connected_gene': 'PCBP2', 'score': 45.37}, {'connected_gene': 'ENSG00000258344', 'score': 31.41}, {'connected_gene': 'CBX5', 'score': 30.99}, {'connected_gene': 'GPR84', 'score': 25.71}, {'connected_gene': 'ZNF385A', 'score': 25.18}, {'connected_gene': 'MAP3K12', 'score': 23.48}, {'connected_gene': 'ATF7', 'score': 22.11}, {'connected_gene': 'LOC100652999', 'score': 20.28}, {'connected_gene': 'HNRNPA1', 'score': 19.68}, {'connected_gene': 'ENSG00000258086', 'score': 14.26}, {'connected_gene': 'HOXC5', 'score': 12.57}, {'connected_gene': 'MIR148B', 'score': 12.43}, {'connected_gene': 'RNU6-950P', 'score': 11.94}, {'connected_gene': 'COPZ1', 'score': 11.9}, {'connected_gene': 'ITGA5', 'score': 11.63}, {'connected_gene': 'ENSG00000260470', 'score': 11.38}, {'connected_gene': 'HOXC8', 'score': 10.83}, {'connected_gene': 'HOXC4', 'score': 10.25}, {'connected_gene': 'HOXC9', 'score': 10.19}, {'connected_gene': 'GTSF1', 'score': 5.3}, {'connected_gene': 'NCKAP1L', 'score': 4.13}, {'connected_gene': 'LOC102724050', 'score': 0.77}]
chr12 GH12I054285 54285195 54291145 1.41 [{'connected_gene': 'SP1', 'score': 18.96}, {'connected_gene': 'PCBP2', 'score': 17.28}, {'connected_gene': 'ATF7', 'score': 16.84}, {'connected_gene': 'RNU6-950P', 'score': 13.17}, {'connected_gene': 'GPR84', 'score': 12.44}, {'connected_gene': 'ENSG00000270175', 'score': 12.37}, {'connected_gene': 'MIR148B', 'score': 12.3}, {'connected_gene': 'CALCOCO1', 'score': 11.52}, {'connected_gene': 'HNRNPA1', 'score': 11.34}, {'connected_gene': 'HOXC4', 'score': 10.1}, {'connected_gene': 'ENSG00000258344', 'score': 10.05}, {'connected_gene': 'LOC100652999', 'score': 9.94}, {'connected_gene': 'GTSF1', 'score': 6.63}, {'connected_gene': 'FLJ12825', 'score': 4.91}, {'connected_gene': 'NFE2', 'score': 0.39}]
chr12 GH12I053344 53344388 53346622 1.69 [{'connected_gene': 'SP7', 'score': 567.47}, {'connected_gene': 'SP1', 'score': 34.68}, {'connected_gene': 'ZNF740', 'score': 23.08}, {'connected_gene': 'ESPL1', 'score': 19.84}, {'connected_gene': 'HNRNPA1', 'score': 19.65}, {'connected_gene': 'PCBP2', 'score': 19.4}, {'connected_gene': 'ENSG00000258344', 'score': 19.15}, {'connected_gene': 'ATF7', 'score': 15.22}, {'connected_gene': 'EIF4B', 'score': 13.23}, {'connected_gene': 'AAAS', 'score': 12.78}, {'connected_gene': 'CALCOCO1', 'score': 12.09}, {'connected_gene': 'RARG', 'score': 12.07}, {'connected_gene': 'IGFBP6', 'score': 11.31}, {'connected_gene': 'ENSG00000257808', 'score': 11.02}, {'connected_gene': 'C12orf10', 'score': 10.66}, {'connected_gene': 'PFDN5', 'score': 10.37}, {'connected_gene': 'LOC100652999', 'score': 9.87}, {'connected_gene': 'ATP5MC2', 'score': 6.58}]
chr12 GH12I053739 53739376 53739713 0.94 [{'connected_gene': 'ATF7', 'score': 23.19}, {'connected_gene': 'MAP3K12', 'score': 16.84}, {'connected_gene': 'SP1', 'score': 15.59}, {'connected_gene': 'ATP5MC2', 'score': 15.15}, {'connected_gene': 'PCBP2', 'score': 14.47}, {'connected_gene': 'ZNF740', 'score': 14.46}, {'connected_gene': 'ENSG00000258344', 'score': 13.8}, {'connected_gene': 'LOC100652999', 'score': 13.44}, {'connected_gene': 'AAAS', 'score': 12.27}, {'connected_gene': 'HNRNPA1', 'score': 11.84}, {'connected_gene': 'CALCOCO1', 'score': 11.04}, {'connected_gene': 'HOXC6', 'score': 10.73}, {'connected_gene': 'CSAD', 'score': 10.37}, {'connected_gene': 'NPFF', 'score': 10.34}, {'connected_gene': 'ENSG00000257808', 'score': 9.82}, {'connected_gene': 'LOC105378250', 'score': 0.39}]
chr12 GH12I053622 53622655 53627614 2.3 [{'connected_gene': 'ATF7', 'score': 571.51}, {'connected_gene': 'ENSG00000267281', 'score': 550.77}, {'connected_gene': 'SP1', 'score': 32.46}, {'connected_gene': 'EIF4B', 'score': 26.03}, {'connected_gene': 'ATP5MC2', 'score': 20.54}, {'connected_gene': 'PCBP2', 'score': 19.41}, {'connected_gene': 'AAAS', 'score': 18.79}, {'connected_gene': 'ITGB7', 'score': 15.63}, {'connected_gene': 'HNRNPA1', 'score': 15.59}, {'connected_gene': 'ENSG00000258344', 'score': 14.66}, {'connected_gene': 'ZNF740', 'score': 14.43}, {'connected_gene': 'LOC100652999', 'score': 12.16}, {'connected_gene': 'COPZ1', 'score': 11.75}, {'connected_gene': 'CALCOCO1', 'score': 10.87}, {'connected_gene': 'HOXC6', 'score': 10.68}, {'connected_gene': 'HOXC4', 'score': 10.6}, {'connected_gene': 'HOXC9', 'score': 10.58}, {'connected_gene': 'HOXC8', 'score': 10.18}, {'connected_gene': 'ENSG00000257808', 'score': 9.77}, {'connected_gene': 'PRR13', 'score': 5.22}, {'connected_gene': 'LOC100419830', 'score': 0.23}]
chr12 GH12I053725 53725339 53728418 2.06 [{'connected_gene': 'LOC105369774', 'score': 550.77}, {'connected_gene': 'CALCOCO1', 'score': 550.77}, {'connected_gene': 'HNRNPA1', 'score': 6.53}]
chr12 GH12I053756 53756480 53757817 1.03 [{'connected_gene': 'CISTR', 'score': 550.77}, {'connected_gene': 'PCBP2', 'score': 14.95}, {'connected_gene': 'SP1', 'score': 14.59}, {'connected_gene': 'ENSG00000258344', 'score': 12.23}, {'connected_gene': 'CALCOCO1', 'score': 11.54}, {'connected_gene': 'AAAS', 'score': 10.96}, {'connected_gene': 'HNRNPA1', 'score': 10.88}, {'connected_gene': 'ATF7', 'score': 10.8}, {'connected_gene': 'MIR196A2', 'score': 10.55}, {'connected_gene': 'LOC100652999', 'score': 10.47}, {'connected_gene': 'ATP5MC2', 'score': 10.28}, {'connected_gene': 'ZNF740', 'score': 10.21}, {'connected_gene': 'LOC105378250', 'score': 0.77}, {'connected_gene': 'GC12M053768', 'score': 0.39}]
chr12 GH12I054987 54987579 54989859 1.3 [{'connected_gene': 'CDK2', 'score': 24.31}, {'connected_gene': 'MMP19', 'score': 21.56}, {'connected_gene': 'DNAJC14', 'score': 19.58}, {'connected_gene': 'ENSG00000258086', 'score': 13.52}, {'connected_gene': 'HOXC5', 'score': 12.54}, {'connected_gene': 'ENSG00000258344', 'score': 12.28}, {'connected_gene': 'LOC100131294', 'score': 11.07}, {'connected_gene': 'HOXC8', 'score': 10.81}, {'connected_gene': 'TMEM198B', 'score': 10.68}, {'connected_gene': 'HNRNPA1', 'score': 10.36}, {'connected_gene': 'NEUROD4', 'score': 10.3}, {'connected_gene': 'HOXC4', 'score': 10.23}, {'connected_gene': 'HOXC9', 'score': 10.16}, {'connected_gene': 'ITGA5', 'score': 10.06}, {'connected_gene': 'TESPA1', 'score': 6.41}, {'connected_gene': 'GC12M054982', 'score': 0.39}, {'connected_gene': 'GC12P054960', 'score': 0.31}]
chr12 GH12I053938 53938001 53941000 1.69 [{'connected_gene': 'HOXC13-AS', 'score': 556.19}, {'connected_gene': 'HOXC13', 'score': 550.77}, {'connected_gene': 'HNRNPA1', 'score': 15.35}, {'connected_gene': 'ZNF740', 'score': 15.06}, {'connected_gene': 'AAAS', 'score': 13.25}, {'connected_gene': 'ATF7', 'score': 12.86}, {'connected_gene': 'ENSG00000258344', 'score': 12.3}, {'connected_gene': 'CSAD', 'score': 11.97}, {'connected_gene': 'CBX5', 'score': 10.49}, {'connected_gene': 'PFDN5', 'score': 9.91}, {'connected_gene': 'ENSG00000257808', 'score': 9.87}, {'connected_gene': 'LOC100652999', 'score': 9.72}, {'connected_gene': 'HOTAIR', 'score': 4.9}]
chr12 GH12I054163 54163908 54164820 0.64 [{'connected_gene': 'ENSG00000257534', 'score': 550.77}, {'connected_gene': 'SP1', 'score': 15.57}, {'connected_gene': 'ZNF740', 'score': 14.46}, {'connected_gene': 'PCBP2', 'score': 14.44}, {'connected_gene': 'ENSG00000258344', 'score': 13.91}, {'connected_gene': 'LOC100652999', 'score': 13.39}, {'connected_gene': 'ATF7', 'score': 13.09}, {'connected_gene': 'AAAS', 'score': 12.24}, {'connected_gene': 'HNRNPA1', 'score': 11.94}, {'connected_gene': 'CALCOCO1', 'score': 10.69}, {'connected_gene': 'CSAD', 'score': 10.36}, {'connected_gene': 'NPFF', 'score': 10.3}, {'connected_gene': 'GC12P054155', 'score': 0.44}, {'connected_gene': 'LOC102724030', 'score': 0.39}, {'connected_gene': 'GC12M054122', 'score': 0.39}, {'connected_gene': 'SMUG1', 'score': 0.34}]

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