Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000504557 [[54388678, 54388800], [54396213, 54396672]] None
ENST00000508190 [[54389292, 54389333], [54393915, 54394510], [54396213, 54397082]] [[54393972, 54394510], [54396213, 54396458]]
ENST00000303450 [[54393902, 54394510], [54396213, 54397121]] [[54393972, 54394510], [54396213, 54396458]]
NM_006897 [[54393902, 54394510], [54396213, 54397121]] [[54393972, 54394510], [54396213, 54396458]]
Promoter
Chrom Start End Description
chr12 54393880 54393962 CAGE_peak_1_at_HOXC9_5end
chr12 54394059 54394088 CAGE_peak_3_at_HOXC9_5end
chr12 54394309 54394336 CAGE_peak_2_at_HOXC9_5end
chr12 54394416 54394467 CAGE_peak_5_at_HOXC9_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr12 GH12I053250 53250571 53253530 2.06 [{'connected_gene': 'MFSD5', 'score': 556.02}, {'connected_gene': 'PIR31799', 'score': 550.77}, {'connected_gene': 'PIR41879', 'score': 550.77}, {'connected_gene': 'ZNF740', 'score': 23.64}, {'connected_gene': 'AAAS', 'score': 22.57}, {'connected_gene': 'ATF7', 'score': 21.8}, {'connected_gene': 'LOC100652999', 'score': 18.47}, {'connected_gene': 'PCBP2', 'score': 14.98}, {'connected_gene': 'SP1', 'score': 14.67}, {'connected_gene': 'HOXC5', 'score': 12.54}, {'connected_gene': 'CSAD', 'score': 12.14}, {'connected_gene': 'HOXC8', 'score': 10.81}, {'connected_gene': 'HOXC9', 'score': 10.16}, {'connected_gene': 'PFDN5', 'score': 10.14}, {'connected_gene': 'ENSG00000257808', 'score': 10.0}, {'connected_gene': 'PRR13', 'score': 8.69}]
chr12 GH12I053078 53078474 53081499 2.24 [{'connected_gene': 'SPRYD3', 'score': 555.04}, {'connected_gene': 'SOAT2', 'score': 17.6}, {'connected_gene': 'ZNF740', 'score': 16.53}, {'connected_gene': 'EIF4B', 'score': 12.47}, {'connected_gene': 'ENSG00000270175', 'score': 12.4}, {'connected_gene': 'RNU6-333P', 'score': 10.72}, {'connected_gene': 'HOXC6', 'score': 10.65}, {'connected_gene': 'CSAD', 'score': 10.63}, {'connected_gene': 'HOXC4', 'score': 10.57}, {'connected_gene': 'HOXC9', 'score': 10.55}, {'connected_gene': 'HOXC8', 'score': 10.16}, {'connected_gene': 'ATF7', 'score': 9.78}, {'connected_gene': 'PFDN5', 'score': 9.53}, {'connected_gene': 'C12orf10', 'score': 9.53}, {'connected_gene': 'LOC283335', 'score': 6.6}, {'connected_gene': 'IGFBP6', 'score': 0.37}]
chr12 GH12I054067 54067783 54068235 0.38 [{'connected_gene': 'MIR615', 'score': 11.5}, {'connected_gene': 'HOXC5', 'score': 11.44}, {'connected_gene': 'HOXC4', 'score': 11.44}, {'connected_gene': 'HOXC6', 'score': 11.39}, {'connected_gene': 'SMUG1', 'score': 10.97}, {'connected_gene': 'HOXC11', 'score': 10.92}, {'connected_gene': 'HOTAIR', 'score': 10.92}, {'connected_gene': 'HOXC8', 'score': 10.9}, {'connected_gene': 'HOXC-AS1', 'score': 10.88}, {'connected_gene': 'HOXC9', 'score': 10.87}, {'connected_gene': 'HOXC-AS2', 'score': 10.87}, {'connected_gene': 'FLJ12825', 'score': 0.44}, {'connected_gene': 'GC12P054090', 'score': 0.39}]
chr12 GH12I054076 54076137 54076306 0.46 [{'connected_gene': 'MIR615', 'score': 11.56}, {'connected_gene': 'HOXC5', 'score': 11.52}, {'connected_gene': 'HOXC4', 'score': 11.52}, {'connected_gene': 'HOXC6', 'score': 11.46}, {'connected_gene': 'LOC102724030', 'score': 11.42}, {'connected_gene': 'SMUG1', 'score': 11.36}, {'connected_gene': 'MIR196A2', 'score': 10.95}, {'connected_gene': 'HOXC-AS3', 'score': 10.93}, {'connected_gene': 'HOXC10', 'score': 10.93}, {'connected_gene': 'HOTAIR', 'score': 10.79}, {'connected_gene': 'HOXC11', 'score': 10.79}, {'connected_gene': 'HOXC8', 'score': 10.56}, {'connected_gene': 'HOXC-AS2', 'score': 10.43}, {'connected_gene': 'HOXC-AS1', 'score': 10.43}, {'connected_gene': 'HOXC9', 'score': 10.43}, {'connected_gene': 'GC12P054090', 'score': 0.77}, {'connected_gene': 'FLJ12825', 'score': 0.37}]
chr12 GH12I054215 54215801 54218400 1.43 [{'connected_gene': 'GPR84', 'score': 12.03}, {'connected_gene': 'HOXC8', 'score': 12.0}, {'connected_gene': 'HOXC-AS1', 'score': 11.74}, {'connected_gene': 'HOXC6', 'score': 11.74}, {'connected_gene': 'HOXC9', 'score': 11.74}, {'connected_gene': 'HOXC-AS2', 'score': 11.74}, {'connected_gene': 'HOXC5', 'score': 11.2}, {'connected_gene': 'HOXC4', 'score': 11.2}, {'connected_gene': 'ENSG00000257534', 'score': 5.53}, {'connected_gene': 'FLJ12825', 'score': 4.83}, {'connected_gene': 'MIR3198-2', 'score': 0.39}, {'connected_gene': 'GC12P054193', 'score': 0.34}]
chr12 GH12I054227 54227601 54228400 0.52 [{'connected_gene': 'GPR84', 'score': 11.89}, {'connected_gene': 'CBX5', 'score': 10.97}, {'connected_gene': 'COPZ1', 'score': 10.95}, {'connected_gene': 'MIR148B', 'score': 10.94}, {'connected_gene': 'RNU6-950P', 'score': 10.92}, {'connected_gene': 'HOXC8', 'score': 10.03}, {'connected_gene': 'HOXC-AS1', 'score': 9.99}, {'connected_gene': 'ZNF385A', 'score': 9.99}, {'connected_gene': 'HOXC9', 'score': 9.99}, {'connected_gene': 'HOXC-AS2', 'score': 9.99}, {'connected_gene': 'HOXC6', 'score': 9.99}, {'connected_gene': 'MIR615', 'score': 9.7}, {'connected_gene': 'HOXC5', 'score': 9.69}, {'connected_gene': 'HOXC4', 'score': 9.69}, {'connected_gene': 'MIR3198-2', 'score': 0.77}, {'connected_gene': 'GC12P054193', 'score': 0.29}]
chr12 GH12I054219 54219655 54220826 1.07 [{'connected_gene': 'GPR84', 'score': 11.53}, {'connected_gene': 'COPZ1', 'score': 11.22}, {'connected_gene': 'RNU6-950P', 'score': 11.19}, {'connected_gene': 'CBX5', 'score': 11.15}, {'connected_gene': 'MIR148B', 'score': 11.02}, {'connected_gene': 'HOXC8', 'score': 10.61}, {'connected_gene': 'HOXC9', 'score': 10.21}, {'connected_gene': 'HOXC6', 'score': 10.21}, {'connected_gene': 'HOXC-AS2', 'score': 10.21}, {'connected_gene': 'HOXC-AS1', 'score': 10.21}, {'connected_gene': 'GTSF1', 'score': 9.27}, {'connected_gene': 'ENSG00000257534', 'score': 5.14}, {'connected_gene': 'FLJ12825', 'score': 5.06}, {'connected_gene': 'MIR3198-2', 'score': 0.39}, {'connected_gene': 'GC12P054193', 'score': 0.31}]
chr12 GH12I054221 54221738 54223443 0.68 [{'connected_gene': 'GPR84', 'score': 11.39}, {'connected_gene': 'COPZ1', 'score': 11.02}, {'connected_gene': 'RNU6-950P', 'score': 10.99}, {'connected_gene': 'CBX5', 'score': 10.9}, {'connected_gene': 'HOXC8', 'score': 10.61}, {'connected_gene': 'HOXC9', 'score': 10.21}, {'connected_gene': 'HOXC-AS2', 'score': 10.21}, {'connected_gene': 'HOXC-AS1', 'score': 10.21}, {'connected_gene': 'HOXC6', 'score': 10.2}, {'connected_gene': 'GTSF1', 'score': 9.27}, {'connected_gene': 'ENSG00000257534', 'score': 5.17}, {'connected_gene': 'MIR3198-2', 'score': 0.44}, {'connected_gene': 'GC12P054193', 'score': 0.31}]
chr12 GH12I054130 54130615 54138911 1.04 [{'connected_gene': 'FLJ12825', 'score': 40.0}, {'connected_gene': 'TARBP2', 'score': 21.03}, {'connected_gene': 'SMUG1', 'score': 11.77}, {'connected_gene': 'MIR615', 'score': 11.54}, {'connected_gene': 'HOXC5', 'score': 11.51}, {'connected_gene': 'HOXC4', 'score': 11.51}, {'connected_gene': 'HOXC6', 'score': 11.5}, {'connected_gene': 'ENSG00000260470', 'score': 11.15}, {'connected_gene': 'HOXC8', 'score': 11.02}, {'connected_gene': 'HOXC9', 'score': 10.97}, {'connected_gene': 'HOXC-AS2', 'score': 10.97}, {'connected_gene': 'HOXC-AS1', 'score': 10.97}, {'connected_gene': 'HOXC-AS3', 'score': 10.86}, {'connected_gene': 'HOXC10', 'score': 10.86}, {'connected_gene': 'MIR196A2', 'score': 10.86}, {'connected_gene': 'ZNF740', 'score': 10.45}, {'connected_gene': 'HOTAIR', 'score': 10.27}, {'connected_gene': 'HOXC11', 'score': 10.27}, {'connected_gene': 'ENSG00000257596', 'score': 9.85}, {'connected_gene': 'SMUG1-AS1', 'score': 0.44}, {'connected_gene': 'LINC02381', 'score': 0.44}, {'connected_gene': 'GC12M054122', 'score': 0.26}]
chr12 GH12I053807 53806040 53806376 0.58 [{'connected_gene': 'HOXC13', 'score': 10.67}, {'connected_gene': 'HOXC13-AS', 'score': 10.67}, {'connected_gene': 'HOXC6', 'score': 10.12}, {'connected_gene': 'HOXC9', 'score': 10.12}, {'connected_gene': 'HOXC-AS1', 'score': 10.12}, {'connected_gene': 'HOXC-AS2', 'score': 10.12}, {'connected_gene': 'HOXC8', 'score': 10.12}, {'connected_gene': 'RN7SKP289', 'score': 0.44}, {'connected_gene': 'GC12M053768', 'score': 0.28}]
chr12 GH12I053806 53806412 53807156 0.77 [{'connected_gene': 'HOXC13', 'score': 10.67}, {'connected_gene': 'HOXC13-AS', 'score': 10.67}, {'connected_gene': 'HOXC6', 'score': 10.12}, {'connected_gene': 'HOXC9', 'score': 10.12}, {'connected_gene': 'HOXC-AS1', 'score': 10.12}, {'connected_gene': 'HOXC-AS2', 'score': 10.12}, {'connected_gene': 'HOXC8', 'score': 10.12}, {'connected_gene': 'RN7SKP289', 'score': 0.44}, {'connected_gene': 'GC12M053768', 'score': 0.28}]
chr12 GH12I053971 53971821 54008664 2.82 [{'connected_gene': 'HOXC11', 'score': 559.87}, {'connected_gene': 'HOXC9', 'score': 555.62}, {'connected_gene': 'HOXC6', 'score': 555.15}, {'connected_gene': 'HOXC10', 'score': 553.5}, {'connected_gene': 'GC12P054010', 'score': 550.77}, {'connected_gene': 'GC12P054044', 'score': 550.77}, {'connected_gene': 'MIR196A2', 'score': 550.77}, {'connected_gene': 'HNRNPA1', 'score': 65.29}, {'connected_gene': 'ZNF740', 'score': 61.89}, {'connected_gene': 'ENSG00000258344', 'score': 51.35}, {'connected_gene': 'ATF7', 'score': 48.41}, {'connected_gene': 'PCBP2', 'score': 44.23}, {'connected_gene': 'MAP3K12', 'score': 41.97}, {'connected_gene': 'LOC100652999', 'score': 40.66}, {'connected_gene': 'SP1', 'score': 36.3}, {'connected_gene': 'CALCOCO1', 'score': 30.73}, {'connected_gene': 'AAAS', 'score': 29.63}, {'connected_gene': 'HOTAIR', 'score': 21.61}, {'connected_gene': 'HOXC4', 'score': 20.46}, {'connected_gene': 'CBX5', 'score': 19.84}, {'connected_gene': 'HOXC8', 'score': 17.52}, {'connected_gene': 'HOXC12', 'score': 15.13}, {'connected_gene': 'HOXC-AS1', 'score': 15.08}, {'connected_gene': 'HOXC13', 'score': 13.58}, {'connected_gene': 'EIF4B', 'score': 13.2}, {'connected_gene': 'RARG', 'score': 11.97}, {'connected_gene': 'HOXC13-AS', 'score': 11.72}, {'connected_gene': 'IGFBP6', 'score': 11.27}, {'connected_gene': 'HOXC5', 'score': 11.22}, {'connected_gene': 'MIR615', 'score': 11.17}, {'connected_gene': 'CSAD', 'score': 10.36}, {'connected_gene': 'NPFF', 'score': 10.31}, {'connected_gene': 'ENSG00000257808', 'score': 9.82}, {'connected_gene': 'TARBP2', 'score': 9.76}, {'connected_gene': 'PFDN5', 'score': 9.7}, {'connected_gene': 'ENSG00000270175', 'score': 5.5}, {'connected_gene': 'ATP5MC2', 'score': 2.67}, {'connected_gene': 'PIR41189', 'score': 0.77}, {'connected_gene': 'ENSG00000273049', 'score': 0.77}, {'connected_gene': 'HOXC-AS3', 'score': 0.77}, {'connected_gene': 'GC12P054094', 'score': 0.77}, {'connected_gene': 'GC12P053988', 'score': 0.77}, {'connected_gene': 'HOXC-AS2', 'score': 0.44}, {'connected_gene': 'GC12P054014', 'score': 0.39}, {'connected_gene': 'GC12P054099', 'score': 0.39}, {'connected_gene': 'GC12P054098', 'score': 0.39}, {'connected_gene': 'GC12P053975', 'score': 0.37}]
chr12 GH12I054191 54191275 54192200 1.11 [{'connected_gene': 'HOXC8', 'score': 12.06}, {'connected_gene': 'HOXC-AS2', 'score': 12.05}, {'connected_gene': 'HOXC-AS1', 'score': 12.05}, {'connected_gene': 'HOXC9', 'score': 12.05}, {'connected_gene': 'HOXC6', 'score': 12.05}, {'connected_gene': 'MIR615', 'score': 11.65}, {'connected_gene': 'HOXC5', 'score': 11.64}, {'connected_gene': 'HOXC4', 'score': 11.64}, {'connected_gene': 'MAP3K12', 'score': 11.62}, {'connected_gene': 'LOC102724030', 'score': 11.59}, {'connected_gene': 'MIR196A2', 'score': 11.29}, {'connected_gene': 'HOXC-AS3', 'score': 11.29}, {'connected_gene': 'HOXC10', 'score': 11.29}, {'connected_gene': 'CBX5', 'score': 11.22}, {'connected_gene': 'HOTAIR', 'score': 10.65}, {'connected_gene': 'HOXC11', 'score': 10.65}, {'connected_gene': 'GC12P054193', 'score': 0.77}, {'connected_gene': 'LOC105369777', 'score': 0.77}]
chr12 GH12I054195 54195144 54198207 1.33 [{'connected_gene': 'HOXC8', 'score': 12.61}, {'connected_gene': 'HOXC-AS2', 'score': 12.6}, {'connected_gene': 'HOXC-AS1', 'score': 12.6}, {'connected_gene': 'HOXC9', 'score': 12.6}, {'connected_gene': 'HOXC6', 'score': 12.6}, {'connected_gene': 'MIR196A2', 'score': 11.8}, {'connected_gene': 'MIR615', 'score': 11.79}, {'connected_gene': 'HOXC5', 'score': 11.79}, {'connected_gene': 'HOXC4', 'score': 11.79}, {'connected_gene': 'LOC102724030', 'score': 11.58}, {'connected_gene': 'HOXC-AS3', 'score': 11.5}, {'connected_gene': 'HOXC10', 'score': 11.5}, {'connected_gene': 'HOTAIR', 'score': 10.65}, {'connected_gene': 'HOXC11', 'score': 10.65}, {'connected_gene': 'HOXC13', 'score': 10.54}, {'connected_gene': 'HOXC13-AS', 'score': 10.54}, {'connected_gene': 'FLJ12825', 'score': 9.13}, {'connected_gene': 'CALCOCO1', 'score': 2.14}, {'connected_gene': 'GPR84', 'score': 1.39}, {'connected_gene': 'NCKAP1L', 'score': 1.33}, {'connected_gene': 'GC12P054193', 'score': 0.77}, {'connected_gene': 'LOC105369777', 'score': 0.44}, {'connected_gene': 'MIR3198-2', 'score': 0.29}]
chr12 GH12I054201 54201437 54201586 0.8 [{'connected_gene': 'HOXC8', 'score': 12.61}, {'connected_gene': 'HOXC-AS2', 'score': 12.6}, {'connected_gene': 'HOXC-AS1', 'score': 12.6}, {'connected_gene': 'HOXC9', 'score': 12.6}, {'connected_gene': 'HOXC6', 'score': 12.6}, {'connected_gene': 'MIR196A2', 'score': 11.8}, {'connected_gene': 'MIR615', 'score': 11.8}, {'connected_gene': 'HOXC5', 'score': 11.78}, {'connected_gene': 'HOXC4', 'score': 11.78}, {'connected_gene': 'HOXC-AS3', 'score': 11.5}, {'connected_gene': 'HOXC10', 'score': 11.5}, {'connected_gene': 'LOC102724030', 'score': 11.31}, {'connected_gene': 'HOXC13', 'score': 10.54}, {'connected_gene': 'HOXC13-AS', 'score': 10.54}, {'connected_gene': 'HOTAIR', 'score': 10.39}, {'connected_gene': 'HOXC11', 'score': 10.39}, {'connected_gene': 'GC12P054193', 'score': 0.44}, {'connected_gene': 'LOC105369777', 'score': 0.39}, {'connected_gene': 'MIR3198-2', 'score': 0.31}]
chr12 GH12I054051 54051141 54055893 2.01 [{'connected_gene': 'HOXC4', 'score': 561.51}, {'connected_gene': 'AAAS', 'score': 31.14}, {'connected_gene': 'ATF7', 'score': 28.82}, {'connected_gene': 'RARG', 'score': 22.78}, {'connected_gene': 'HNRNPA1', 'score': 19.48}, {'connected_gene': 'ENSG00000260470', 'score': 18.41}, {'connected_gene': 'PCBP2', 'score': 14.92}, {'connected_gene': 'HOTAIR', 'score': 14.57}, {'connected_gene': 'SP1', 'score': 14.57}, {'connected_gene': 'IGFBP6', 'score': 13.28}, {'connected_gene': 'ENSG00000258344', 'score': 12.27}, {'connected_gene': 'HOXC5', 'score': 11.51}, {'connected_gene': 'HOXC6', 'score': 11.45}, {'connected_gene': 'PFDN5', 'score': 11.25}, {'connected_gene': 'MIR196A2', 'score': 11.23}, {'connected_gene': 'HOXC-AS3', 'score': 11.23}, {'connected_gene': 'HOXC10', 'score': 11.23}, {'connected_gene': 'HOXC8', 'score': 11.16}, {'connected_gene': 'HOXC-AS1', 'score': 11.01}, {'connected_gene': 'HOXC-AS2', 'score': 11.0}, {'connected_gene': 'HOXC9', 'score': 11.0}, {'connected_gene': 'LOC102724030', 'score': 10.94}, {'connected_gene': 'SMUG1', 'score': 10.9}, {'connected_gene': 'CBX5', 'score': 10.52}, {'connected_gene': 'LOC100652999', 'score': 10.43}, {'connected_gene': 'HOXC13', 'score': 10.42}, {'connected_gene': 'HOXC13-AS', 'score': 10.42}, {'connected_gene': 'HOXC11', 'score': 10.22}, {'connected_gene': 'ZNF740', 'score': 10.21}, {'connected_gene': 'FLJ12825', 'score': 7.19}, {'connected_gene': 'GC12P054078', 'score': 0.39}, {'connected_gene': 'PIR31123', 'score': 0.39}]
chr12 GH12I054009 54009200 54034991 3.17 [{'connected_gene': 'HOXC4', 'score': 558.95}, {'connected_gene': 'HOXC6', 'score': 555.05}, {'connected_gene': 'HOXC5', 'score': 552.94}, {'connected_gene': 'PIR59985', 'score': 550.77}, {'connected_gene': 'GC12P054093', 'score': 550.77}, {'connected_gene': 'PIR46464', 'score': 550.77}, {'connected_gene': 'PIR59725', 'score': 550.77}, {'connected_gene': 'PIR53546', 'score': 550.77}, {'connected_gene': 'GC12P054071', 'score': 550.77}, {'connected_gene': 'AAAS', 'score': 31.93}, {'connected_gene': 'ATF7', 'score': 29.85}, {'connected_gene': 'HNRNPA1', 'score': 26.25}, {'connected_gene': 'RARG', 'score': 22.78}, {'connected_gene': 'ENSG00000260470', 'score': 18.38}, {'connected_gene': 'ZNF740', 'score': 16.54}, {'connected_gene': 'HOXC8', 'score': 15.25}, {'connected_gene': 'SMUG1', 'score': 14.63}, {'connected_gene': 'PCBP2', 'score': 13.83}, {'connected_gene': 'IGFBP6', 'score': 13.28}, {'connected_gene': 'SP1', 'score': 13.16}, {'connected_gene': 'HOXC-AS1', 'score': 12.94}, {'connected_gene': 'CBX5', 'score': 12.87}, {'connected_gene': 'ENSG00000258344', 'score': 12.83}, {'connected_gene': 'ENSG00000270175', 'score': 12.05}, {'connected_gene': 'CSAD', 'score': 12.01}, {'connected_gene': 'COPZ1', 'score': 11.45}, {'connected_gene': 'PFDN5', 'score': 11.25}, {'connected_gene': 'MAP3K12', 'score': 10.91}, {'connected_gene': 'FLJ12825', 'score': 7.56}, {'connected_gene': 'HOXC9', 'score': 6.88}, {'connected_gene': 'LINC02381', 'score': 5.62}, {'connected_gene': 'ATP5MC2', 'score': 2.82}, {'connected_gene': 'HOXC10', 'score': 2.25}, {'connected_gene': 'PIR45911', 'score': 0.77}, {'connected_gene': 'PIR33391', 'score': 0.77}, {'connected_gene': 'PIR50530', 'score': 0.77}, {'connected_gene': 'PIR57300', 'score': 0.77}, {'connected_gene': 'GC12M054068', 'score': 0.77}, {'connected_gene': 'PIR46275', 'score': 0.77}, {'connected_gene': 'GC12M054069', 'score': 0.77}, {'connected_gene': 'ENSG00000260597', 'score': 0.77}, {'connected_gene': 'PIR60886', 'score': 0.77}, {'connected_gene': 'ENSG00000273046', 'score': 0.77}, {'connected_gene': 'PIR54946', 'score': 0.77}, {'connected_gene': 'PIR48298', 'score': 0.44}, {'connected_gene': 'PIR34386', 'score': 0.44}, {'connected_gene': 'GC12P054063', 'score': 0.44}, {'connected_gene': 'GC12M054067', 'score': 0.44}, {'connected_gene': 'GC12P054097', 'score': 0.44}, {'connected_gene': 'PIR34718', 'score': 0.44}, {'connected_gene': 'PIR54432', 'score': 0.44}, {'connected_gene': 'PIR33335', 'score': 0.44}, {'connected_gene': 'PIR59819', 'score': 0.44}, {'connected_gene': 'GC12P054054', 'score': 0.39}, {'connected_gene': 'GC12P054096', 'score': 0.39}, {'connected_gene': 'MIR615', 'score': 0.39}, {'connected_gene': 'GC12P054099', 'score': 0.37}, {'connected_gene': 'ENSG00000273049', 'score': 0.28}]
chr12 GH12I054188 54188000 54189626 1.97 [{'connected_gene': 'SMUG1', 'score': 550.77}, {'connected_gene': 'LOC105369777', 'score': 550.77}, {'connected_gene': 'FLJ12825', 'score': 28.48}, {'connected_gene': 'HOXC8', 'score': 12.06}, {'connected_gene': 'HOXC-AS1', 'score': 12.05}, {'connected_gene': 'HOXC9', 'score': 12.05}, {'connected_gene': 'HOXC-AS2', 'score': 12.05}, {'connected_gene': 'HOXC6', 'score': 12.05}, {'connected_gene': 'ENSG00000257605', 'score': 11.92}, {'connected_gene': 'MIR615', 'score': 11.65}, {'connected_gene': 'HOXC5', 'score': 11.64}, {'connected_gene': 'HOXC4', 'score': 11.64}, {'connected_gene': 'LOC102724030', 'score': 11.61}, {'connected_gene': 'MIR196A2', 'score': 11.29}, {'connected_gene': 'HOXC-AS3', 'score': 11.29}, {'connected_gene': 'HOXC10', 'score': 11.29}, {'connected_gene': 'HOXC11', 'score': 10.65}, {'connected_gene': 'HOTAIR', 'score': 10.65}, {'connected_gene': 'GC12M054122', 'score': 0.39}]
chr12 GH12I054277 54277514 54284616 2.32 [{'connected_gene': 'CBX5', 'score': 581.8}, {'connected_gene': 'HNRNPA1', 'score': 579.5}, {'connected_gene': 'SP1', 'score': 45.26}, {'connected_gene': 'PCBP2', 'score': 44.75}, {'connected_gene': 'MAP3K12', 'score': 32.59}, {'connected_gene': 'AAAS', 'score': 32.57}, {'connected_gene': 'ENSG00000258344', 'score': 30.79}, {'connected_gene': 'COPZ1', 'score': 23.77}, {'connected_gene': 'ATF7', 'score': 19.81}, {'connected_gene': 'TARBP2', 'score': 12.77}, {'connected_gene': 'GPR84', 'score': 12.29}, {'connected_gene': 'RNU6-950P', 'score': 12.09}, {'connected_gene': 'NPFF', 'score': 11.72}, {'connected_gene': 'HOXC6', 'score': 10.69}, {'connected_gene': 'HOXC4', 'score': 10.61}, {'connected_gene': 'HOXC9', 'score': 10.59}, {'connected_gene': 'HOXC8', 'score': 10.19}, {'connected_gene': 'LOC100652999', 'score': 9.74}, {'connected_gene': 'PFDN5', 'score': 9.7}, {'connected_gene': 'FLJ12825', 'score': 5.94}, {'connected_gene': 'GTSF1', 'score': 4.49}, {'connected_gene': 'ENSG00000257596', 'score': 0.37}, {'connected_gene': 'NFE2', 'score': 0.34}]
chr12 GH12I054323 54323730 54332044 2.3 [{'connected_gene': 'COPZ1', 'score': 550.31}, {'connected_gene': 'ENSG00000258344', 'score': 22.07}, {'connected_gene': 'SP1', 'score': 21.24}, {'connected_gene': 'PCBP2', 'score': 20.04}, {'connected_gene': 'ATF7', 'score': 19.54}, {'connected_gene': 'HOXC8', 'score': 19.28}, {'connected_gene': 'HOXC9', 'score': 19.03}, {'connected_gene': 'HNRNPA1', 'score': 18.75}, {'connected_gene': 'ENSG00000258086', 'score': 13.8}, {'connected_gene': 'TARBP2', 'score': 13.59}, {'connected_gene': 'HOXC5', 'score': 12.57}, {'connected_gene': 'GPR84', 'score': 12.44}, {'connected_gene': 'HOXC6', 'score': 10.68}, {'connected_gene': 'HOXC4', 'score': 10.6}, {'connected_gene': 'ITGA5', 'score': 10.19}, {'connected_gene': 'NPFF', 'score': 10.06}, {'connected_gene': 'LOC100652999', 'score': 9.92}, {'connected_gene': 'GC12P054329', 'score': 0.77}, {'connected_gene': 'GC12M054318', 'score': 0.39}, {'connected_gene': 'RNU6-950P', 'score': 0.39}]
chr12 GH12I053378 53378125 53383729 2.3 [{'connected_gene': 'SP1', 'score': 585.4}, {'connected_gene': 'PIR43704', 'score': 550.77}, {'connected_gene': 'PRR13', 'score': 22.75}, {'connected_gene': 'AAAS', 'score': 20.94}, {'connected_gene': 'HOXC8', 'score': 19.25}, {'connected_gene': 'HOXC9', 'score': 19.0}, {'connected_gene': 'ENSG00000258086', 'score': 13.52}, {'connected_gene': 'AMHR2', 'score': 12.92}, {'connected_gene': 'SP7', 'score': 12.88}, {'connected_gene': 'HOXC5', 'score': 12.54}, {'connected_gene': 'EIF4B', 'score': 12.33}, {'connected_gene': 'HOXC6', 'score': 10.65}, {'connected_gene': 'HOXC4', 'score': 10.58}, {'connected_gene': 'ATF7', 'score': 9.82}]
chr12 GH12I054354 54354713 54361290 1.9 [{'connected_gene': 'SP1', 'score': 52.63}, {'connected_gene': 'PCBP2', 'score': 45.37}, {'connected_gene': 'ENSG00000258344', 'score': 31.41}, {'connected_gene': 'CBX5', 'score': 30.99}, {'connected_gene': 'GPR84', 'score': 25.71}, {'connected_gene': 'ZNF385A', 'score': 25.18}, {'connected_gene': 'MAP3K12', 'score': 23.48}, {'connected_gene': 'ATF7', 'score': 22.11}, {'connected_gene': 'LOC100652999', 'score': 20.28}, {'connected_gene': 'HNRNPA1', 'score': 19.68}, {'connected_gene': 'ENSG00000258086', 'score': 14.26}, {'connected_gene': 'HOXC5', 'score': 12.57}, {'connected_gene': 'MIR148B', 'score': 12.43}, {'connected_gene': 'RNU6-950P', 'score': 11.94}, {'connected_gene': 'COPZ1', 'score': 11.9}, {'connected_gene': 'ITGA5', 'score': 11.63}, {'connected_gene': 'ENSG00000260470', 'score': 11.38}, {'connected_gene': 'HOXC8', 'score': 10.83}, {'connected_gene': 'HOXC4', 'score': 10.25}, {'connected_gene': 'HOXC9', 'score': 10.19}, {'connected_gene': 'GTSF1', 'score': 5.3}, {'connected_gene': 'NCKAP1L', 'score': 4.13}, {'connected_gene': 'LOC102724050', 'score': 0.77}]
chr12 GH12I053003 53003986 53009319 2.11 [{'connected_gene': 'EIF4B', 'score': 592.23}, {'connected_gene': 'ZNF740', 'score': 29.77}, {'connected_gene': 'AAAS', 'score': 23.23}, {'connected_gene': 'ATF7', 'score': 22.81}, {'connected_gene': 'CSAD', 'score': 22.28}, {'connected_gene': 'PCBP2', 'score': 13.85}, {'connected_gene': 'SP1', 'score': 13.18}, {'connected_gene': 'MAP3K12', 'score': 11.59}, {'connected_gene': 'HOXC9', 'score': 10.16}, {'connected_gene': 'ENSG00000257808', 'score': 9.95}, {'connected_gene': 'PFDN5', 'score': 9.94}, {'connected_gene': 'LOC100652999', 'score': 9.71}, {'connected_gene': 'ENSG00000257475', 'score': 0.44}]
chr12 GH12I053622 53622655 53627614 2.3 [{'connected_gene': 'ATF7', 'score': 571.51}, {'connected_gene': 'ENSG00000267281', 'score': 550.77}, {'connected_gene': 'SP1', 'score': 32.46}, {'connected_gene': 'EIF4B', 'score': 26.03}, {'connected_gene': 'ATP5MC2', 'score': 20.54}, {'connected_gene': 'PCBP2', 'score': 19.41}, {'connected_gene': 'AAAS', 'score': 18.79}, {'connected_gene': 'ITGB7', 'score': 15.63}, {'connected_gene': 'HNRNPA1', 'score': 15.59}, {'connected_gene': 'ENSG00000258344', 'score': 14.66}, {'connected_gene': 'ZNF740', 'score': 14.43}, {'connected_gene': 'LOC100652999', 'score': 12.16}, {'connected_gene': 'COPZ1', 'score': 11.75}, {'connected_gene': 'CALCOCO1', 'score': 10.87}, {'connected_gene': 'HOXC6', 'score': 10.68}, {'connected_gene': 'HOXC4', 'score': 10.6}, {'connected_gene': 'HOXC9', 'score': 10.58}, {'connected_gene': 'HOXC8', 'score': 10.18}, {'connected_gene': 'ENSG00000257808', 'score': 9.77}, {'connected_gene': 'PRR13', 'score': 5.22}, {'connected_gene': 'LOC100419830', 'score': 0.23}]
chr12 GH12I054140 54140452 54142890 0.86 [{'connected_gene': 'SMUG1-AS1', 'score': 550.77}, {'connected_gene': 'FLJ12825', 'score': 37.52}, {'connected_gene': 'SMUG1', 'score': 19.34}, {'connected_gene': 'HOXC5', 'score': 11.16}, {'connected_gene': 'MIR196A2', 'score': 11.15}, {'connected_gene': 'HOXC6', 'score': 11.14}, {'connected_gene': 'HOXC-AS3', 'score': 11.14}, {'connected_gene': 'HOXC10', 'score': 11.14}, {'connected_gene': 'MIR615', 'score': 11.06}, {'connected_gene': 'HOXC4', 'score': 11.04}, {'connected_gene': 'HOXC8', 'score': 10.8}, {'connected_gene': 'HOXC9', 'score': 10.79}, {'connected_gene': 'HOXC-AS2', 'score': 10.79}, {'connected_gene': 'HOXC-AS1', 'score': 10.79}, {'connected_gene': 'HOTAIR', 'score': 10.62}, {'connected_gene': 'HOXC11', 'score': 10.62}, {'connected_gene': 'ENSG00000260470', 'score': 10.39}, {'connected_gene': 'ITGA5', 'score': 4.83}, {'connected_gene': 'LINC02381', 'score': 0.37}, {'connected_gene': 'GC12M054122', 'score': 0.28}]
chr12 GH12I054987 54987579 54989859 1.3 [{'connected_gene': 'CDK2', 'score': 24.31}, {'connected_gene': 'MMP19', 'score': 21.56}, {'connected_gene': 'DNAJC14', 'score': 19.58}, {'connected_gene': 'ENSG00000258086', 'score': 13.52}, {'connected_gene': 'HOXC5', 'score': 12.54}, {'connected_gene': 'ENSG00000258344', 'score': 12.28}, {'connected_gene': 'LOC100131294', 'score': 11.07}, {'connected_gene': 'HOXC8', 'score': 10.81}, {'connected_gene': 'TMEM198B', 'score': 10.68}, {'connected_gene': 'HNRNPA1', 'score': 10.36}, {'connected_gene': 'NEUROD4', 'score': 10.3}, {'connected_gene': 'HOXC4', 'score': 10.23}, {'connected_gene': 'HOXC9', 'score': 10.16}, {'connected_gene': 'ITGA5', 'score': 10.06}, {'connected_gene': 'TESPA1', 'score': 6.41}, {'connected_gene': 'GC12M054982', 'score': 0.39}, {'connected_gene': 'GC12P054960', 'score': 0.31}]
chr12 GH12I053960 53960917 53961066 0.38 [{'connected_gene': 'HOXC-AS3', 'score': 12.62}, {'connected_gene': 'HOXC10', 'score': 12.62}, {'connected_gene': 'HOXC6', 'score': 12.59}, {'connected_gene': 'MIR196A2', 'score': 12.57}, {'connected_gene': 'HOXC5', 'score': 12.5}, {'connected_gene': 'HOXC13', 'score': 11.86}, {'connected_gene': 'HOXC13-AS', 'score': 11.86}, {'connected_gene': 'HOXC9', 'score': 11.72}, {'connected_gene': 'HOXC-AS2', 'score': 11.71}, {'connected_gene': 'HOXC-AS1', 'score': 11.71}, {'connected_gene': 'HOXC8', 'score': 11.68}, {'connected_gene': 'HOXC4', 'score': 11.43}, {'connected_gene': 'LOC105369775', 'score': 0.77}, {'connected_gene': 'ENSG00000275589', 'score': 0.77}]
chr12 GH12I054228 54228653 54230946 1.07 [{'connected_gene': 'MIR3198-2', 'score': 550.77}, {'connected_gene': 'GPR84', 'score': 11.89}, {'connected_gene': 'CBX5', 'score': 10.97}, {'connected_gene': 'COPZ1', 'score': 10.95}, {'connected_gene': 'MIR148B', 'score': 10.94}, {'connected_gene': 'RNU6-950P', 'score': 10.92}, {'connected_gene': 'HOXC8', 'score': 10.02}, {'connected_gene': 'HOXC-AS1', 'score': 9.99}, {'connected_gene': 'ZNF385A', 'score': 9.99}, {'connected_gene': 'HOXC9', 'score': 9.99}, {'connected_gene': 'HOXC-AS2', 'score': 9.99}, {'connected_gene': 'HOXC6', 'score': 9.99}, {'connected_gene': 'MIR615', 'score': 9.69}, {'connected_gene': 'HOXC5', 'score': 9.69}, {'connected_gene': 'HOXC4', 'score': 9.69}, {'connected_gene': 'FLJ12825', 'score': 5.36}, {'connected_gene': 'GC12P054193', 'score': 0.28}]
chr12 GH12I054079 54079004 54083573 1.44 [{'connected_gene': 'LOC100240734', 'score': 550.77}, {'connected_gene': 'LOC100240735', 'score': 550.77}, {'connected_gene': 'SMUG1', 'score': 17.78}, {'connected_gene': 'FLJ12825', 'score': 13.64}, {'connected_gene': 'CBX5', 'score': 10.88}, {'connected_gene': 'MIR615', 'score': 10.72}, {'connected_gene': 'HOXC5', 'score': 10.68}, {'connected_gene': 'HOXC4', 'score': 10.68}, {'connected_gene': 'HOXC6', 'score': 10.63}, {'connected_gene': 'HOXC8', 'score': 10.47}, {'connected_gene': 'HOXC-AS2', 'score': 10.45}, {'connected_gene': 'HOXC-AS1', 'score': 10.45}, {'connected_gene': 'HOXC9', 'score': 10.45}, {'connected_gene': 'HOTAIR', 'score': 10.37}, {'connected_gene': 'HOXC11', 'score': 10.37}, {'connected_gene': 'MAP3K12', 'score': 10.16}, {'connected_gene': 'MIR196A2', 'score': 10.07}, {'connected_gene': 'HOXC-AS3', 'score': 10.06}, {'connected_gene': 'HOXC10', 'score': 10.06}, {'connected_gene': 'GC12P054090', 'score': 0.77}]
chr12 GH12I054377 54377974 54380386 1.72 [{'connected_gene': 'ENSG00000258086', 'score': 13.8}, {'connected_gene': 'HOXC5', 'score': 12.57}, {'connected_gene': 'MIR148B', 'score': 12.0}, {'connected_gene': 'RNU6-950P', 'score': 11.12}, {'connected_gene': 'COPZ1', 'score': 11.09}, {'connected_gene': 'HOXC8', 'score': 10.83}, {'connected_gene': 'ITGA5', 'score': 10.3}, {'connected_gene': 'HOXC9', 'score': 10.18}, {'connected_gene': 'HOXC12', 'score': 6.02}, {'connected_gene': 'ZNF385A', 'score': 4.77}, {'connected_gene': 'GPR84', 'score': 0.39}, {'connected_gene': 'LOC102724050', 'score': 0.31}]
chr12 GH12I054077 54077305 54078341 0.43 [{'connected_gene': 'GC12P054090', 'score': 550.77}, {'connected_gene': 'SMUG1', 'score': 16.54}, {'connected_gene': 'MIR615', 'score': 11.56}, {'connected_gene': 'HOXC5', 'score': 11.51}, {'connected_gene': 'HOXC4', 'score': 11.51}, {'connected_gene': 'HOXC6', 'score': 11.46}, {'connected_gene': 'LOC102724030', 'score': 11.42}, {'connected_gene': 'MIR196A2', 'score': 10.94}, {'connected_gene': 'HOXC-AS3', 'score': 10.93}, {'connected_gene': 'HOXC10', 'score': 10.93}, {'connected_gene': 'HOTAIR', 'score': 10.79}, {'connected_gene': 'HOXC11', 'score': 10.79}, {'connected_gene': 'HOXC8', 'score': 10.56}, {'connected_gene': 'HOXC-AS1', 'score': 10.43}, {'connected_gene': 'HOXC9', 'score': 10.43}, {'connected_gene': 'HOXC-AS2', 'score': 10.43}, {'connected_gene': 'FLJ12825', 'score': 5.74}, {'connected_gene': 'LOC100240735', 'score': 0.77}]
chr12 GH12I053961 53961757 53961906 0.38 [{'connected_gene': 'ENSG00000275589', 'score': 550.77}, {'connected_gene': 'HOXC-AS3', 'score': 12.62}, {'connected_gene': 'HOXC10', 'score': 12.62}, {'connected_gene': 'MIR196A2', 'score': 12.59}, {'connected_gene': 'HOXC6', 'score': 12.59}, {'connected_gene': 'HOXC5', 'score': 12.5}, {'connected_gene': 'HOXC13', 'score': 11.86}, {'connected_gene': 'HOXC13-AS', 'score': 11.86}, {'connected_gene': 'HOXC9', 'score': 11.72}, {'connected_gene': 'HOXC-AS2', 'score': 11.72}, {'connected_gene': 'HOXC-AS1', 'score': 11.71}, {'connected_gene': 'HOXC8', 'score': 11.68}, {'connected_gene': 'HOXC4', 'score': 11.43}, {'connected_gene': 'LOC105369775', 'score': 0.44}]
chr12 GH12I053768 53768782 53772130 0.57 [{'connected_gene': 'GC12M053768', 'score': 550.77}, {'connected_gene': 'HOXC-AS3', 'score': 10.46}, {'connected_gene': 'HOXC10', 'score': 10.46}, {'connected_gene': 'HOXC6', 'score': 10.46}, {'connected_gene': 'MIR196A2', 'score': 10.46}, {'connected_gene': 'HOXC5', 'score': 10.45}, {'connected_gene': 'HOXC-AS2', 'score': 10.25}, {'connected_gene': 'HOXC-AS1', 'score': 10.25}, {'connected_gene': 'HOXC9', 'score': 10.25}, {'connected_gene': 'HOXC8', 'score': 10.24}, {'connected_gene': 'HOTAIR', 'score': 9.84}, {'connected_gene': 'HOXC11', 'score': 9.84}, {'connected_gene': 'HOXC4', 'score': 9.47}, {'connected_gene': 'MIR615', 'score': 9.47}, {'connected_gene': 'CISTR', 'score': 4.95}, {'connected_gene': 'RN7SKP289', 'score': 0.25}]
chr12 GH12I053962 53962947 53970409 1.13 [{'connected_gene': 'ENSG00000277994', 'score': 550.77}, {'connected_gene': 'ENSG00000277129', 'score': 550.77}, {'connected_gene': 'ENSG00000274817', 'score': 550.77}, {'connected_gene': 'HOTAIR', 'score': 23.9}, {'connected_gene': 'MAP3K12', 'score': 16.82}, {'connected_gene': 'HOXC6', 'score': 12.62}, {'connected_gene': 'MIR196A2', 'score': 12.59}, {'connected_gene': 'HOXC5', 'score': 12.51}, {'connected_gene': 'HOXC13', 'score': 11.84}, {'connected_gene': 'HOXC13-AS', 'score': 11.84}, {'connected_gene': 'HOXC9', 'score': 11.74}, {'connected_gene': 'HOXC-AS2', 'score': 11.72}, {'connected_gene': 'HOXC-AS1', 'score': 11.72}, {'connected_gene': 'HOXC8', 'score': 11.69}, {'connected_gene': 'HOXC4', 'score': 11.44}, {'connected_gene': 'AAAS', 'score': 11.16}, {'connected_gene': 'SOAT2', 'score': 4.49}, {'connected_gene': 'ENSG00000275589', 'score': 0.77}]

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