PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000526767	[[70894129, 70894233], [70896444, 70896508], [70897695, 70897716], [70897794, 70897824], [70898883, 70898970], [70901983, 70902255]]	[[70896457, 70896508], [70897695, 70897716], [70897794, 70897824], [70898883, 70898937]]
ENST00000530128	[[70894171, 70894233], [70896444, 70896508], [70897695, 70897716], [70897794, 70897824], [70898883, 70898970], [70899618, 70900129]]	[[70896457, 70896508], [70897695, 70897716], [70897794, 70897824], [70898883, 70898937]]
ENST00000528003	[[70894175, 70894233], [70896444, 70897125]]	None
ENST00000529625	[[70894175, 70894233], [70896444, 70896508], [70897695, 70897824], [70898883, 70899263]]	None
ENST00000533547	[[70894175, 70894233], [70896444, 70896508], [70897695, 70897824], [70898883, 70898970], [70901983, 70902244]]	None
ENST00000381057	[[70894175, 70894233], [70896444, 70896508], [70897695, 70897716], [70898883, 70898970], [70901983, 70902246]]	[[70896457, 70896508], [70897695, 70897716], [70898883, 70898937]]
NM_000200	[[70894129, 70894233], [70896444, 70896508], [70897695, 70897716], [70897794, 70897824], [70898883, 70898970], [70901983, 70902255]]	[[70896457, 70896508], [70897695, 70897716], [70897794, 70897824], [70898883, 70898937]]

Promoter

Chrom	Start	End	Description
chr4	70893956	70893962	CAGE_peak_3_at_HTN3_5end
chr4	70894169	70894188	CAGE_peak_1_at_HTN3_5end
chr4	70896475	70896477	CAGE_peak_2_at_HTN3_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I069995	69995917	69995976	0.5	[{'connected_gene': 'STATH', 'score': 550.77}, {'connected_gene': 'HTN3', 'score': 0.29}]
chr4	GH04I070028	70028410	70028469	0.5	[{'connected_gene': 'HTN3', 'score': 550.77}, {'connected_gene': 'GC04P070037', 'score': 0.44}]