PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000371483	[[95326421, 95327044], [95335847, 95335976], [95338915, 95338963], [95346976, 95349829]]	[[95326477, 95327044], [95335847, 95335976], [95338915, 95338963], [95346976, 95347366]]
ENST00000371481	[[95326421, 95327044], [95335847, 95335976], [95346976, 95349829]]	[[95326477, 95327044], [95335847, 95335976], [95346976, 95347366]]
ENST00000604414	[[95326438, 95327044], [95335847, 95335976], [95363830, 95364237]]	[[95326477, 95327044], [95335847, 95335976], [95363830, 95363845]]
NM_001195755	[[95326421, 95327044], [95335847, 95335976], [95346976, 95349829]]	[[95326477, 95327044], [95335847, 95335976], [95346976, 95347366]]
NM_181745	[[95326421, 95327044], [95335847, 95335976], [95338915, 95338963], [95346976, 95349829]]	[[95326477, 95327044], [95335847, 95335976], [95338915, 95338963], [95346976, 95347366]]

Promoter

Chrom	Start	End	Description
chr10	95326416	95326454	CAGE_peak_1_at_O3FAR1_5end
chr10	95326623	95326652	CAGE_peak_3_at_O3FAR1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I093514	93514602	93516800	0.6	[{'connected_gene': 'CEP55', 'score': 19.2}, {'connected_gene': 'FFAR4', 'score': 10.88}, {'connected_gene': 'CYP26A1', 'score': 10.43}, {'connected_gene': 'RNA5SP323', 'score': 0.44}, {'connected_gene': 'GC10M093511', 'score': 0.44}, {'connected_gene': 'GC10M093549', 'score': 0.28}]
chr10	GH10I093591	93591196	93592361	0.54	[{'connected_gene': 'PDE6C', 'score': 12.49}, {'connected_gene': 'FFAR4', 'score': 12.17}, {'connected_gene': 'RBP4', 'score': 7.15}, {'connected_gene': 'GC10P093599', 'score': 0.44}, {'connected_gene': 'GC10P093568', 'score': 0.34}]
chr10	GH10I093321	93321400	93321437	0.22	[{'connected_gene': 'FFAR4', 'score': 4.25}, {'connected_gene': 'RPL17P34', 'score': 0.28}, {'connected_gene': 'GC10P093383', 'score': 0.21}, {'connected_gene': 'MYOF', 'score': 0.1}]
chr10	GH10I093572	93572801	93574000	0.38	[{'connected_gene': 'FFAR4', 'score': 10.75}, {'connected_gene': 'RBP4', 'score': 5.88}, {'connected_gene': 'GC10P093568', 'score': 0.44}, {'connected_gene': 'GC10P093599', 'score': 0.31}]
chr10	GH10I093566	93566201	93567492	1.29	[{'connected_gene': 'FFAR4', 'score': 550.77}, {'connected_gene': 'GC10P093568', 'score': 550.77}, {'connected_gene': 'RBP4', 'score': 5.66}]
chr10	GH10I093567	93567972	93568115	0.38	[{'connected_gene': 'FFAR4', 'score': 552.39}, {'connected_gene': 'GC10P093568', 'score': 550.77}]
chr10	GH10I093601	93601225	93601284	1.15	[{'connected_gene': 'GC10P093601', 'score': 550.77}, {'connected_gene': 'GC10P093599', 'score': 550.77}, {'connected_gene': 'RBP4', 'score': 550.77}, {'connected_gene': 'FFAR4', 'score': 0.28}]
chr10	GH10I093550	93550744	93550893	0.31	[{'connected_gene': 'GC10M093549', 'score': 550.77}, {'connected_gene': 'FFAR4', 'score': 6.99}, {'connected_gene': 'RNA5SP323', 'score': 0.26}, {'connected_gene': 'GC10M093511', 'score': 0.26}]