PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000334549	[[118956999, 118957222], [118960669, 118960798], [118969007, 118969810]]	[[118956999, 118957222], [118960669, 118960798], [118969007, 118969810]]
NM_181840	[[118956999, 118957222], [118960669, 118960798], [118969007, 118969810]]	[[118956999, 118957222], [118960669, 118960798], [118969007, 118969810]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I117259	117259834	117259883	0.22	[{'connected_gene': 'SLC18A2', 'score': 7.38}, {'connected_gene': 'KCNK18', 'score': 1.79}, {'connected_gene': 'ENSG00000277879', 'score': 0.44}, {'connected_gene': 'LOC105378500', 'score': 0.37}]
chr10	GH10I116984	116984325	116984469	0.69	[{'connected_gene': 'SHTN1', 'score': 4.35}, {'connected_gene': 'KCNK18', 'score': 2.51}, {'connected_gene': 'HSPA12A', 'score': 1.76}, {'connected_gene': 'PNLIP', 'score': 1.72}, {'connected_gene': 'PNLIPRP2', 'score': 1.64}, {'connected_gene': 'PNLIPRP1', 'score': 1.62}, {'connected_gene': 'VAX1', 'score': 1.37}, {'connected_gene': 'ENSG00000235742', 'score': 0.28}]
chr10	GH10I117070	117070311	117070391	0.22	[{'connected_gene': 'KCNK18', 'score': 2.0}, {'connected_gene': 'SHTN1', 'score': 1.94}, {'connected_gene': 'C10orf82', 'score': 1.24}, {'connected_gene': 'ENSG00000235742', 'score': 0.25}]
chr10	GH10I117496	117496630	117496879	1.06	[{'connected_gene': 'KCNK18', 'score': 2.08}, {'connected_gene': 'EMX2', 'score': 1.93}, {'connected_gene': 'SHTN1', 'score': 1.53}, {'connected_gene': 'GC10P117520', 'score': 0.34}, {'connected_gene': 'EMX2OS', 'score': 0.25}, {'connected_gene': 'LOC105378502', 'score': 0.19}]
chr10	GH10I117174	117174601	117176299	1.09	[{'connected_gene': 'VAX1', 'score': 11.86}, {'connected_gene': 'KCNK18', 'score': 11.85}, {'connected_gene': 'RPL12P26', 'score': 11.85}, {'connected_gene': 'MIR3663HG', 'score': 11.04}, {'connected_gene': 'RAB11FIP2', 'score': 10.52}, {'connected_gene': 'SLC18A2', 'score': 10.31}, {'connected_gene': 'LOC105378500', 'score': 10.31}, {'connected_gene': 'GC10M117197', 'score': 0.34}]
chr10	GH10I117166	117166496	117166636	0.41	[{'connected_gene': 'MIR3663', 'score': 550.77}, {'connected_gene': 'VAX1', 'score': 17.76}, {'connected_gene': 'KCNK18', 'score': 10.83}, {'connected_gene': 'RPL12P26', 'score': 10.83}, {'connected_gene': 'MIR3663HG', 'score': 0.77}]
chr10	GH10I117165	117165850	117166039	0.73	[{'connected_gene': 'MIR3663', 'score': 550.77}, {'connected_gene': 'VAX1', 'score': 11.89}, {'connected_gene': 'KCNK18', 'score': 10.83}, {'connected_gene': 'RPL12P26', 'score': 10.83}, {'connected_gene': 'MIR3663HG', 'score': 0.77}]
chr10	GH10I117168	117168190	117168379	0.84	[{'connected_gene': 'MIR3663', 'score': 550.77}, {'connected_gene': 'MIR3663HG', 'score': 550.77}, {'connected_gene': 'VAX1', 'score': 11.89}, {'connected_gene': 'KCNK18', 'score': 10.85}, {'connected_gene': 'RPL12P26', 'score': 10.85}]
chr10	GH10I117167	117167124	117167252	0.33	[{'connected_gene': 'MIR3663', 'score': 550.77}, {'connected_gene': 'MIR3663HG', 'score': 550.77}, {'connected_gene': 'VAX1', 'score': 14.47}, {'connected_gene': 'RPL12P26', 'score': 10.85}, {'connected_gene': 'KCNK18', 'score': 10.83}, {'connected_gene': 'C10orf82', 'score': 1.35}]