PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000375026	[[123753632, 123754059], [123754781, 123754916], [123755196, 123755343], [123755951, 123756349]]	[[123753844, 123754059], [123754781, 123754916], [123755196, 123755343], [123755951, 123756132]]
ENST00000528595	[[123753921, 123754059], [123754781, 123754916], [123755196, 123755343], [123756101, 123756340]]	[[123753921, 123754059], [123754781, 123754916], [123755196, 123755343], [123756101, 123756132]]
NM_001013743	[[123753632, 123754059], [123754781, 123754916], [123755196, 123755343], [123755951, 123756349]]	[[123753844, 123754059], [123754781, 123754916], [123755196, 123755343], [123755951, 123756132]]

Promoter

Chrom	Start	End	Description
chr11	123756334	123756379	CAGE_peak_1_at_TMEM225_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I123740	123740154	123743992	2.29	[{'connected_gene': 'ZNF202', 'score': 594.72}, {'connected_gene': 'CLMP', 'score': 12.14}, {'connected_gene': 'OR6X1', 'score': 10.37}, {'connected_gene': 'OR10G7', 'score': 9.76}, {'connected_gene': 'OR6M1', 'score': 8.28}, {'connected_gene': 'OR10G4', 'score': 8.23}, {'connected_gene': 'OR8G2P', 'score': 6.79}, {'connected_gene': 'OR4D5', 'score': 6.56}, {'connected_gene': 'TMEM225', 'score': 5.88}, {'connected_gene': 'OR6T1', 'score': 5.33}, {'connected_gene': 'OR8D4', 'score': 2.95}, {'connected_gene': 'OR10S1', 'score': 1.43}]
chr11	GH11I123773	123773930	123778508	0.79	[{'connected_gene': 'ZNF202', 'score': 22.35}, {'connected_gene': 'OR6X1', 'score': 11.06}, {'connected_gene': 'OR6M1', 'score': 10.96}, {'connected_gene': 'TMEM225', 'score': 10.32}, {'connected_gene': 'OR8D4', 'score': 9.66}, {'connected_gene': 'RNU1-21P', 'score': 0.39}, {'connected_gene': 'LOC105369544', 'score': 0.34}]
chr11	GH11I123799	123799061	123802186	0.52	[{'connected_gene': 'ZNF202', 'score': 11.85}, {'connected_gene': 'TMEM225', 'score': 7.89}, {'connected_gene': 'LOC105369544', 'score': 0.77}, {'connected_gene': 'OR6M1', 'score': 0.44}]
chr11	GH11I123774	123773193	123773342	0.2	[{'connected_gene': 'OR6M1', 'score': 10.66}, {'connected_gene': 'ZNF202', 'score': 10.35}, {'connected_gene': 'TMEM225', 'score': 10.31}, {'connected_gene': 'OR8D4', 'score': 9.66}, {'connected_gene': 'RNU1-21P', 'score': 0.44}, {'connected_gene': 'LOC105369544', 'score': 0.34}]
chr11	GH11I123885	123885648	123885707	0.61	[{'connected_gene': 'TMEM225', 'score': 550.77}, {'connected_gene': 'OR8D4', 'score': 0.37}]
chr11	GH11I124241	124241180	124241298	0.37	[{'connected_gene': 'OR8G5', 'score': 550.77}, {'connected_gene': 'OR8G1', 'score': 550.77}, {'connected_gene': 'TMEM225', 'score': 79.33}, {'connected_gene': 'SPA17', 'score': 15.37}, {'connected_gene': 'VWA5A', 'score': 9.71}, {'connected_gene': 'GC11P124250', 'score': 0.44}]
chr11	GH11I124086	124086647	124086833	0.44	[{'connected_gene': 'LOC105369545', 'score': 550.77}, {'connected_gene': 'VWA5A', 'score': 12.35}, {'connected_gene': 'TMEM225', 'score': 3.56}, {'connected_gene': 'SCN3B', 'score': 2.47}, {'connected_gene': 'OR6M1', 'score': 1.93}, {'connected_gene': 'OR8D1', 'score': 1.55}, {'connected_gene': 'OR10D4P', 'score': 0.44}]
chr11	GH11I123821	123821865	123823382	0.43	[{'connected_gene': 'GC11M123818', 'score': 550.77}, {'connected_gene': 'TMEM225', 'score': 9.78}, {'connected_gene': 'OR6M1', 'score': 0.37}]