PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000508956	[[134321979, 134323316], [134327490, 134327681], [134329036, 134329225], [134337989, 134338107], [134339590, 134339699], [134343894, 134343977], [134346597, 134346660], [134348462, 134348537], [134366276, 134366339], [134369666, 134369860]]	[[134322420, 134323316], [134327490, 134327681], [134329036, 134329225], [134337989, 134338107], [134339590, 134339699], [134343894, 134343977], [134346597, 134346660], [134348462, 134348537], [134366276, 134366339], [134369666, 134369802]]
ENST00000423778	[[134322123, 134323316], [134327490, 134327681], [134329036, 134329225], [134337989, 134338107], [134339590, 134339699], [134343894, 134343977], [134346597, 134346660], [134348462, 134348537], [134362157, 134362220], [134366276, 134366339], [134369666, 134369864]]	[[134322420, 134323316], [134327490, 134327681], [134329036, 134329225], [134337989, 134338107], [134339590, 134339699], [134343894, 134343977], [134346597, 134346660], [134348462, 134348537], [134362157, 134362220], [134366276, 134366339], [134369666, 134369802]]
ENST00000503669	[[134322273, 134323316], [134329036, 134329225], [134337989, 134338107], [134339590, 134339699], [134343894, 134343977], [134346597, 134346660], [134348462, 134348537], [134362157, 134362220], [134366276, 134366339], [134369666, 134369863]]	[[134323288, 134323316], [134329036, 134329225], [134337989, 134338107], [134339590, 134339699], [134343894, 134343977], [134346597, 134346660], [134348462, 134348537], [134362157, 134362220], [134366276, 134366339], [134369666, 134369802]]
ENST00000506319	[[134325842, 134327681], [134329036, 134329225], [134329363, 134329549], [134337989, 134338107], [134338791, 134338830], [134339590, 134339699], [134343894, 134343977], [134346597, 134346660], [134348245, 134348537], [134358666, 134358784], [134359996, 134360119], [134362157, 134362220], [134366276, 134366339], [134369720, 134370478]]	None
ENST00000508041	[[134331801, 134332038], [134337989, 134338107], [134339590, 134339699], [134343894, 134343977], [134346597, 134346660], [134346730, 134346845]]	None
NM_178554	[[134318764, 134323316], [134327490, 134327681], [134329036, 134329225], [134337989, 134338107], [134339590, 134339699], [134343894, 134343977], [134346597, 134346660], [134348462, 134348537], [134362157, 134362220], [134366276, 134366339], [134369666, 134369864]]	[[134322420, 134323316], [134327490, 134327681], [134329036, 134329225], [134337989, 134338107], [134339590, 134339699], [134343894, 134343977], [134346597, 134346660], [134348462, 134348537], [134362157, 134362220], [134366276, 134366339], [134369666, 134369802]]

Promoter

Chrom	Start	End	Description
chr3	134369853	134369872	CAGE_peak_1_at_KY_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I134677	134677145	134679878	0.52	[{'connected_gene': 'CEP63', 'score': 6.17}, {'connected_gene': 'KY', 'score': 0.31}, {'connected_gene': 'EPHB1', 'score': 0.18}, {'connected_gene': 'RNU6-1174P', 'score': 0.15}]
chr3	GH03I134681	134681713	134684014	0.31	[{'connected_gene': 'CEP63', 'score': 6.66}, {'connected_gene': 'KY', 'score': 0.29}, {'connected_gene': 'EPHB1', 'score': 0.17}, {'connected_gene': 'RNU6-1174P', 'score': 0.15}]
chr3	GH03I134650	134650266	134652358	1.72	[{'connected_gene': 'KY', 'score': 550.77}, {'connected_gene': 'ANAPC13', 'score': 23.9}, {'connected_gene': 'GC03M134600', 'score': 0.25}, {'connected_gene': 'EPHB1', 'score': 0.23}]
chr3	GH03I134685	134685692	134687063	0.51	[{'connected_gene': 'KY', 'score': 11.53}, {'connected_gene': 'EPHB1', 'score': 4.83}, {'connected_gene': 'CEP63', 'score': 4.23}, {'connected_gene': 'RNU6-1174P', 'score': 0.16}]
chr3	GH03I134680	134680259	134680408	0.4	[{'connected_gene': 'KY', 'score': 0.31}, {'connected_gene': 'EPHB1', 'score': 0.18}, {'connected_gene': 'RNU6-1174P', 'score': 0.15}]
chr3	GH03I134590	134590921	134591319	0.24	[{'connected_gene': 'ANAPC13', 'score': 65.81}, {'connected_gene': 'CEP63', 'score': 25.98}, {'connected_gene': 'KY', 'score': 10.7}, {'connected_gene': 'EPHB1', 'score': 0.44}, {'connected_gene': 'PIR32535', 'score': 0.31}, {'connected_gene': 'GC03P134564', 'score': 0.31}]
chr3	GH03I134644	134644226	134646340	0.43	[{'connected_gene': 'ANAPC13', 'score': 28.59}, {'connected_gene': 'CEP63', 'score': 12.89}, {'connected_gene': 'KY', 'score': 0.44}, {'connected_gene': 'GC03M134600', 'score': 0.26}, {'connected_gene': 'EPHB1', 'score': 0.25}]
chr3	GH03I134662	134662753	134665574	0.63	[{'connected_gene': 'ANAPC13', 'score': 16.34}, {'connected_gene': 'EPHB1', 'score': 10.81}, {'connected_gene': 'KY', 'score': 0.39}, {'connected_gene': 'RNU6-1174P', 'score': 0.13}]
chr3	GH03I134605	134605401	134607600	0.54	[{'connected_gene': 'ANAPC13', 'score': 54.22}, {'connected_gene': 'GC03M134600', 'score': 0.77}, {'connected_gene': 'EPHB1', 'score': 0.44}, {'connected_gene': 'KY', 'score': 0.25}]
chr3	GH03I134601	134601931	134602759	0.62	[{'connected_gene': 'GC03M134600', 'score': 550.77}, {'connected_gene': 'ANAPC13', 'score': 52.45}, {'connected_gene': 'EPHB1', 'score': 0.77}, {'connected_gene': 'KY', 'score': 0.25}]
chr3	GH03I134600	134600601	134601457	0.64	[{'connected_gene': 'GC03M134600', 'score': 550.77}, {'connected_gene': 'ANAPC13', 'score': 54.56}, {'connected_gene': 'EPHB1', 'score': 0.77}, {'connected_gene': 'KY', 'score': 0.23}]