PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000380916	[[14611068, 14619096], [14619636, 14619680], [14639893, 14640010], [14658746, 14658885], [14662212, 14662324], [14672827, 14672926], [14674184, 14674383], [14680030, 14680160], [14690334, 14690383], [14693226, 14693469]]	[[14618963, 14619096], [14619636, 14619680], [14639893, 14640010], [14658746, 14658885], [14662212, 14662324], [14672827, 14672926], [14674184, 14674338]]
ENST00000497966	[[14677363, 14677470], [14680030, 14680160], [14683568, 14683727], [14690334, 14690383], [14693226, 14693263]]	None
NM_178566	[[14611068, 14619096], [14619636, 14619680], [14639893, 14640010], [14658746, 14658885], [14662212, 14662324], [14672827, 14672926], [14674184, 14674383], [14680030, 14680160], [14690334, 14690383], [14693226, 14693480]]	[[14618963, 14619096], [14619636, 14619680], [14639893, 14640010], [14658746, 14658885], [14662212, 14662324], [14672827, 14672926], [14674184, 14674338]]

Promoter

Chrom	Start	End	Description
chr9	14640303	14640306	CAGE_peak_7_at_ZDHHC21_5end
chr9	14674313	14674355	CAGE_peak_8_at_ZDHHC21_5end
chr9	14693248	14693413	CAGE_peak_1_at_ZDHHC21_5end
chr9	14693417	14693437	CAGE_peak_2_at_ZDHHC21_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I014306	14306125	14324469	3.2	[{'connected_gene': 'NFIB', 'score': 562.52}, {'connected_gene': 'ENSG00000225472', 'score': 550.77}, {'connected_gene': 'GC09P014316', 'score': 550.77}, {'connected_gene': 'ZDHHC21', 'score': 16.87}, {'connected_gene': 'CDCA4P1', 'score': 13.83}, {'connected_gene': 'GC09P014255', 'score': 0.22}]
chr9	GH09I014400	14400041	14401459	1.06	[{'connected_gene': 'NFIB', 'score': 558.01}, {'connected_gene': 'ZDHHC21', 'score': 2.35}, {'connected_gene': 'GC09P014417', 'score': 0.37}]
chr9	GH09I014342	14342843	14354211	1.99	[{'connected_gene': 'NFIB', 'score': 19.17}, {'connected_gene': 'ENSG00000225472', 'score': 12.25}, {'connected_gene': 'ZDHHC21', 'score': 1.46}, {'connected_gene': 'GC09P014354', 'score': 0.44}]
chr9	GH09I013979	13979337	13980114	0.85	[{'connected_gene': 'ZDHHC21', 'score': 11.63}, {'connected_gene': 'PES1P2', 'score': 0.44}, {'connected_gene': 'LINC00583', 'score': 0.23}, {'connected_gene': 'LOC101929507', 'score': 0.23}]
chr9	GH09I014749	14749646	14753043	0.31	[{'connected_gene': 'ZDHHC21', 'score': 15.94}, {'connected_gene': 'CER1', 'score': 11.07}, {'connected_gene': 'LOC105375979', 'score': 0.31}, {'connected_gene': 'FREM1', 'score': 0.1}]
chr9	GH09I014729	14729875	14731579	0.31	[{'connected_gene': 'ZDHHC21', 'score': 18.66}, {'connected_gene': 'CER1', 'score': 9.08}, {'connected_gene': 'ENSG00000272871', 'score': 4.83}, {'connected_gene': 'LOC105375979', 'score': 0.25}]
chr9	GH09I014768	14768401	14768853	0.76	[{'connected_gene': 'ZDHHC21', 'score': 10.93}, {'connected_gene': 'RNU6-1260P', 'score': 10.48}, {'connected_gene': 'LOC105375979', 'score': 0.39}, {'connected_gene': 'CER1', 'score': 0.25}, {'connected_gene': 'FREM1', 'score': 0.11}]
chr9	GH09I014575	14575438	14575691	0.22	[{'connected_gene': 'ZDHHC21', 'score': 2.05}, {'connected_gene': 'ENSG00000273399', 'score': 0.39}, {'connected_gene': 'ENSG00000237137', 'score': 0.26}]
chr9	GH09I014692	14692400	14694032	1.93	[{'connected_gene': 'ZDHHC21', 'score': 581.84}, {'connected_gene': 'GC09M014689', 'score': 0.77}]
chr9	GH09I014745	14745670	14747901	0.38	[{'connected_gene': 'CER1', 'score': 19.54}, {'connected_gene': 'ZDHHC21', 'score': 7.08}, {'connected_gene': 'ENSG00000272871', 'score': 4.97}, {'connected_gene': 'LOC105375979', 'score': 0.29}, {'connected_gene': 'FREM1', 'score': 0.1}]
chr9	GH09I014868	14868816	14869522	0.88	[{'connected_gene': 'FREM1', 'score': 6.5}, {'connected_gene': 'ZDHHC21', 'score': 4.84}, {'connected_gene': 'RNU6-1260P', 'score': 0.37}]
chr9	GH09I014029	14029037	14032897	1.05	[{'connected_gene': 'LOC101929507', 'score': 550.77}, {'connected_gene': 'CDCA4P1', 'score': 13.79}, {'connected_gene': 'MPDZ', 'score': 13.49}, {'connected_gene': 'ZDHHC21', 'score': 11.92}, {'connected_gene': 'ENSG00000235533', 'score': 0.77}]
chr9	GH09I014209	14209397	14209642	1.25	[{'connected_gene': 'CDCA4P1', 'score': 45.22}, {'connected_gene': 'ZDHHC21', 'score': 28.03}, {'connected_gene': 'MPDZ', 'score': 13.72}, {'connected_gene': 'ENSG00000272871', 'score': 11.46}, {'connected_gene': 'RPL7AP47', 'score': 0.44}, {'connected_gene': 'GC09P014255', 'score': 0.25}, {'connected_gene': 'NFIB', 'score': 0.09}]
chr9	GH09I013704	13704754	13708843	0.96	[{'connected_gene': 'CDCA4P1', 'score': 20.28}, {'connected_gene': 'ZDHHC21', 'score': 16.84}, {'connected_gene': 'MPDZ', 'score': 10.94}, {'connected_gene': 'ENSG00000273399', 'score': 9.8}, {'connected_gene': 'GC09P013786', 'score': 0.18}, {'connected_gene': 'GC09P013560', 'score': 0.11}]
chr9	GH09I014432	14432543	14434794	1.02	[{'connected_gene': 'TRH-GTG1-6', 'score': 550.77}, {'connected_gene': 'GC09P014433', 'score': 550.77}, {'connected_gene': 'CDCA4P1', 'score': 16.17}, {'connected_gene': 'ZDHHC21', 'score': 14.36}, {'connected_gene': 'SNAPC3', 'score': 11.76}]
chr9	GH09I014687	14687798	14689221	0.64	[{'connected_gene': 'GC09M014689', 'score': 550.77}, {'connected_gene': 'ZDHHC21', 'score': 24.9}, {'connected_gene': 'ENSG00000272871', 'score': 22.74}, {'connected_gene': 'PIR45304', 'score': 0.2}]
chr9	GH09I014554	14554361	14556064	0.46	[{'connected_gene': 'ENSG00000237137', 'score': 0.34}, {'connected_gene': 'ENSG00000273399', 'score': 0.29}, {'connected_gene': 'ZDHHC21', 'score': 0.12}]
chr9	GH09I014690	14690453	14691348	0.43	[{'connected_gene': 'GC09M014689', 'score': 550.77}, {'connected_gene': 'ZDHHC21', 'score': 25.06}]
chr9	GH09I014691	14691403	14691552	0.31	[{'connected_gene': 'GC09M014689', 'score': 550.77}, {'connected_gene': 'ZDHHC21', 'score': 0.77}]
chr9	GH09I014561	14561870	14562505	0.59	[{'connected_gene': 'ENSG00000273399', 'score': 0.31}, {'connected_gene': 'ENSG00000237137', 'score': 0.29}, {'connected_gene': 'ZDHHC21', 'score': 0.12}]
chr9	GH09I014688	14687123	14687272	0.43	[{'connected_gene': 'GC09M014689', 'score': 0.77}, {'connected_gene': 'ZDHHC21', 'score': 0.44}, {'connected_gene': 'PIR45304', 'score': 0.2}]