PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000228567	[[33527172, 33529836], [33532766, 33532896], [33535283, 33535455], [33538105, 33538226], [33559723, 33560291], [33579072, 33579430], [33592306, 33592754]]	[[33529764, 33529836], [33532766, 33532896], [33535283, 33535455], [33538105, 33538226], [33559723, 33560291], [33579072, 33579430], [33592306, 33592457]]
ENST00000535526	[[33529207, 33529836], [33532766, 33532896], [33535283, 33535455], [33538105, 33538226], [33559723, 33560291], [33561173, 33561253], [33576844, 33576944], [33579072, 33579430], [33592306, 33592581]]	[[33529764, 33529836], [33532766, 33532896], [33535283, 33535455], [33538105, 33538226], [33559723, 33560257]]
ENST00000539102	[[33529207, 33529836], [33532766, 33532896], [33535283, 33535455], [33538105, 33538226], [33559723, 33560291], [33561173, 33561253], [33576844, 33576944], [33579072, 33579430], [33592306, 33592581]]	[[33576868, 33576944], [33579072, 33579430], [33592306, 33592457]]
ENST00000567656	[[33560732, 33561253], [33579072, 33579095]]	None
NM_198992	[[33528347, 33529836], [33532766, 33532896], [33535283, 33535455], [33538105, 33538226], [33559723, 33560291], [33579072, 33579430], [33592306, 33592754]]	[[33529764, 33529836], [33532766, 33532896], [33535283, 33535455], [33538105, 33538226], [33559723, 33560291], [33579072, 33579430], [33592306, 33592457]]

Promoter

Chrom	Start	End	Description
chr12	33592574	33592584	CAGE_peak_6_at_SYT10_5end
chr12	33592743	33592764	CAGE_peak_1_at_SYT10_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr12	GH12I033529	33529601	33530217	0.31	[{'connected_gene': 'SYT10', 'score': 10.56}, {'connected_gene': 'RNU6-400P', 'score': 0.25}, {'connected_gene': 'GC12P033476', 'score': 0.23}]
chr12	GH12I033115	33115796	33116925	0.2	[{'connected_gene': 'SYT10', 'score': 4.11}, {'connected_gene': 'GC12P033085', 'score': 0.29}, {'connected_gene': 'GC12P033250', 'score': 0.12}, {'connected_gene': 'GC12P033249', 'score': 0.12}]
chr12	GH12I033440	33439600	33440015	1.74	[{'connected_gene': 'SYT10', 'score': 570.44}, {'connected_gene': 'ENSG00000259937', 'score': 5.38}, {'connected_gene': 'ENSG00000273853', 'score': 0.44}]
chr12	GH12I033439	33439066	33439215	0.43	[{'connected_gene': 'SYT10', 'score': 550.77}, {'connected_gene': 'ENSG00000259937', 'score': 4.86}, {'connected_gene': 'ENSG00000273853', 'score': 0.44}]
chr12	GH12I033318	33317165	33317380	0.2	[{'connected_gene': 'SYT10', 'score': 5.05}, {'connected_gene': 'GC12M033249', 'score': 0.44}, {'connected_gene': 'ENSG00000259937', 'score': 0.17}]
chr12	GH12I033441	33439266	33439415	0.56	[{'connected_gene': 'SYT10', 'score': 550.77}, {'connected_gene': 'ENSG00000273853', 'score': 0.44}]
chr12	GH12I033438	33438826	33438975	0.46	[{'connected_gene': 'SYT10', 'score': 550.77}, {'connected_gene': 'ENSG00000273853', 'score': 0.44}]
chr12	GH12I034346	34346384	34347589	0.2	[{'connected_gene': 'ALG10', 'score': 6.28}, {'connected_gene': 'SYT10', 'score': 3.93}, {'connected_gene': 'PIR59367', 'score': 0.22}, {'connected_gene': 'PIR33437', 'score': 0.18}]
chr12	GH12I033020	33020828	33022009	0.65	[{'connected_gene': 'ENSG00000259937', 'score': 5.12}, {'connected_gene': 'SYT10', 'score': 4.11}, {'connected_gene': 'ENSG00000257435', 'score': 0.29}, {'connected_gene': 'GC12P033085', 'score': 0.21}]