PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000398468	[[73429385, 73430176], [73435527, 73435742], [73437898, 73439641]]	[[73429794, 73430176], [73435527, 73435742], [73437898, 73438057]]
NM_001134462	[[73429385, 73430176], [73435527, 73435742], [73437898, 73438340]]	[[73429794, 73430176], [73435527, 73435742], [73437898, 73438057]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I073202	73202032	73203713	0.54	[{'connected_gene': 'NOTO', 'score': 550.77}, {'connected_gene': 'PRADC1', 'score': 11.85}, {'connected_gene': 'SMYD5', 'score': 6.73}, {'connected_gene': 'GC02P073186', 'score': 0.37}]
chr2	GH02I073212	73212513	73213203	0.82	[{'connected_gene': 'SMYD5', 'score': 550.77}, {'connected_gene': 'PRADC1', 'score': 20.15}, {'connected_gene': 'CCT7', 'score': 17.49}, {'connected_gene': 'RAB11FIP5', 'score': 10.7}, {'connected_gene': 'SFXN5', 'score': 10.16}, {'connected_gene': 'SPR', 'score': 10.0}, {'connected_gene': 'NOTO', 'score': 0.39}]
chr2	GH02I073175	73175043	73178265	1.56	[{'connected_gene': 'SMYD5', 'score': 21.01}, {'connected_gene': 'ALMS1', 'score': 14.1}, {'connected_gene': 'DUSP11', 'score': 13.27}, {'connected_gene': 'SFXN5', 'score': 12.86}, {'connected_gene': 'PRADC1', 'score': 11.86}, {'connected_gene': 'NOTO', 'score': 11.63}, {'connected_gene': 'SPR', 'score': 11.18}, {'connected_gene': 'ENSG00000273245', 'score': 11.14}, {'connected_gene': 'EMX1', 'score': 10.46}, {'connected_gene': 'CCT7', 'score': 5.09}, {'connected_gene': 'EGR4', 'score': 1.45}, {'connected_gene': 'GC02P073186', 'score': 0.44}, {'connected_gene': 'RAB11FIP5', 'score': 0.37}]
chr2	GH02I073191	73191133	73192599	0.79	[{'connected_gene': 'SMYD5', 'score': 21.9}, {'connected_gene': 'RAB11FIP5', 'score': 11.24}, {'connected_gene': 'PRADC1', 'score': 11.02}, {'connected_gene': 'SFXN5', 'score': 10.97}, {'connected_gene': 'SPR', 'score': 9.87}, {'connected_gene': 'EMX1', 'score': 9.82}, {'connected_gene': 'CCT7', 'score': 4.99}, {'connected_gene': 'GC02P073186', 'score': 0.44}, {'connected_gene': 'NOTO', 'score': 0.39}]
chr2	GH02I073239	73239622	73239681	0.5	[{'connected_gene': 'PIR47890', 'score': 550.77}, {'connected_gene': 'CCT7', 'score': 550.44}, {'connected_gene': 'NOTO', 'score': 11.08}]