PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000489408	[[32023262, 32023394], [32027739, 32027901], [32030151, 32030417]]	None
ENST00000360311	[[32023265, 32023394], [32030151, 32033120]]	[[32030571, 32032470]]
NM_001137674	[[32023265, 32023394], [32030151, 32033228]]	[[32030571, 32032470]]

Promoter

Chrom	Start	End	Description
chr3	32023232	32023273	CAGE_peak_1_at_ZNF860_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I031899	31899936	31902198	0.2	[{'connected_gene': 'ZNF860', 'score': 10.61}, {'connected_gene': 'OSBPL10', 'score': 10.53}, {'connected_gene': 'GC03P031801', 'score': 0.15}, {'connected_gene': 'GC03P031803', 'score': 0.15}, {'connected_gene': 'PIR35964', 'score': 0.15}, {'connected_gene': 'GC03P031804', 'score': 0.15}]
chr3	GH03I031902	31902532	31907375	0.43	[{'connected_gene': 'ZNF860', 'score': 10.62}, {'connected_gene': 'OSBPL10', 'score': 10.53}, {'connected_gene': 'GC03P031801', 'score': 0.15}, {'connected_gene': 'GC03P031803', 'score': 0.15}, {'connected_gene': 'PIR35964', 'score': 0.15}, {'connected_gene': 'GC03P031804', 'score': 0.15}]
chr3	GH03I031910	31910796	31912000	0.51	[{'connected_gene': 'ZNF860', 'score': 10.97}, {'connected_gene': 'OSBPL10', 'score': 10.87}, {'connected_gene': 'GC03P031801', 'score': 0.14}, {'connected_gene': 'GC03P031803', 'score': 0.14}, {'connected_gene': 'PIR35964', 'score': 0.14}, {'connected_gene': 'GC03P031804', 'score': 0.14}]
chr3	GH03I031896	31896869	31897018	0.51	[{'connected_gene': 'ZNF860', 'score': 11.03}, {'connected_gene': 'OSBPL10', 'score': 10.95}, {'connected_gene': 'GC03P031801', 'score': 0.15}, {'connected_gene': 'GC03P031803', 'score': 0.15}, {'connected_gene': 'PIR35964', 'score': 0.15}, {'connected_gene': 'GC03P031804', 'score': 0.15}]
chr3	GH03I031889	31889731	31894391	0.82	[{'connected_gene': 'ZNF860', 'score': 10.45}, {'connected_gene': 'OSBPL10', 'score': 10.37}, {'connected_gene': 'GC03P031801', 'score': 0.16}, {'connected_gene': 'GC03P031803', 'score': 0.16}, {'connected_gene': 'PIR35964', 'score': 0.16}, {'connected_gene': 'GC03P031804', 'score': 0.16}]
chr3	GH03I031907	31907731	31910336	0.52	[{'connected_gene': 'ZNF860', 'score': 10.57}, {'connected_gene': 'OSBPL10', 'score': 10.48}, {'connected_gene': 'GC03P031801', 'score': 0.14}, {'connected_gene': 'GC03P031803', 'score': 0.14}, {'connected_gene': 'PIR35964', 'score': 0.14}, {'connected_gene': 'GC03P031804', 'score': 0.14}]
chr3	GH03I031840	31840389	31840538	0.31	[{'connected_gene': 'ZNF860', 'score': 10.51}, {'connected_gene': 'OSBPL10', 'score': 10.47}, {'connected_gene': 'GC03P031801', 'score': 0.26}, {'connected_gene': 'GC03P031803', 'score': 0.26}, {'connected_gene': 'PIR35964', 'score': 0.26}, {'connected_gene': 'GC03P031804', 'score': 0.26}]
chr3	GH03I031971	31971472	31972930	0.58	[{'connected_gene': 'ZNF860', 'score': 0.44}, {'connected_gene': 'OSBPL10', 'score': 0.14}, {'connected_gene': 'GC03P031801', 'score': 0.09}, {'connected_gene': 'GC03P031803', 'score': 0.09}, {'connected_gene': 'PIR35964', 'score': 0.09}, {'connected_gene': 'GC03P031804', 'score': 0.09}]
chr3	GH03I031927	31927036	31928322	0.51	[{'connected_gene': 'ZNF860', 'score': 0.23}, {'connected_gene': 'GC03P031801', 'score': 0.13}, {'connected_gene': 'GC03P031803', 'score': 0.13}, {'connected_gene': 'PIR35964', 'score': 0.13}, {'connected_gene': 'GC03P031804', 'score': 0.13}, {'connected_gene': 'OSBPL10', 'score': 0.11}]
chr3	GH03I031978	31978019	31983000	2.4	[{'connected_gene': 'OSBPL10', 'score': 559.94}, {'connected_gene': 'ZNF860', 'score': 550.77}, {'connected_gene': 'CNOT10', 'score': 10.22}, {'connected_gene': 'GC03P031801', 'score': 0.09}, {'connected_gene': 'GC03P031803', 'score': 0.09}, {'connected_gene': 'PIR35964', 'score': 0.09}, {'connected_gene': 'GC03P031804', 'score': 0.09}]
chr3	GH03I031944	31944510	31949461	1.28	[{'connected_gene': 'OSBPL10', 'score': 18.29}, {'connected_gene': 'ZNF860', 'score': 11.79}, {'connected_gene': 'OSBPL10-AS1', 'score': 9.87}, {'connected_gene': 'GC03P031801', 'score': 0.11}, {'connected_gene': 'GC03P031803', 'score': 0.11}, {'connected_gene': 'PIR35964', 'score': 0.11}, {'connected_gene': 'GC03P031804', 'score': 0.11}]
chr3	GH03I032002	32002629	32002778	0.51	[{'connected_gene': 'OSBPL10', 'score': 20.27}, {'connected_gene': 'ZNF860', 'score': 11.99}, {'connected_gene': 'GC03M031986', 'score': 0.37}, {'connected_gene': 'RPL21P40', 'score': 0.31}, {'connected_gene': 'GC03M031988', 'score': 0.05}]
chr3	GH03I031917	31917019	31920031	1.42	[{'connected_gene': 'OSBPL10', 'score': 5.14}, {'connected_gene': 'ZNF860', 'score': 4.24}, {'connected_gene': 'GC03P031801', 'score': 0.13}, {'connected_gene': 'GC03P031803', 'score': 0.13}, {'connected_gene': 'PIR35964', 'score': 0.13}, {'connected_gene': 'GC03P031804', 'score': 0.13}]
chr3	GH03I031936	31936238	31937516	0.51	[{'connected_gene': 'OSBPL10', 'score': 16.3}, {'connected_gene': 'ZNF860', 'score': 11.36}, {'connected_gene': 'GC03P031801', 'score': 0.12}, {'connected_gene': 'GC03P031803', 'score': 0.12}, {'connected_gene': 'PIR35964', 'score': 0.12}, {'connected_gene': 'GC03P031804', 'score': 0.12}]
chr3	GH03I031649	31649399	31649876	0.48	[{'connected_gene': 'OSBPL10', 'score': 4.12}, {'connected_gene': 'ZNF860', 'score': 3.95}, {'connected_gene': 'PIR58590', 'score': 0.77}, {'connected_gene': 'GC03M031604', 'score': 0.31}]
chr3	GH03I031922	31922621	31923796	0.77	[{'connected_gene': 'OSBPL10', 'score': 4.77}, {'connected_gene': 'ZNF860', 'score': 0.22}, {'connected_gene': 'GC03P031801', 'score': 0.13}, {'connected_gene': 'GC03P031803', 'score': 0.13}, {'connected_gene': 'PIR35964', 'score': 0.13}, {'connected_gene': 'GC03P031804', 'score': 0.13}]
chr3	GH03I031966	31966113	31971144	1.26	[{'connected_gene': 'OSBPL10', 'score': 10.74}, {'connected_gene': 'ZNF860', 'score': 0.39}, {'connected_gene': 'GC03P031801', 'score': 0.1}, {'connected_gene': 'GC03P031803', 'score': 0.1}, {'connected_gene': 'PIR35964', 'score': 0.1}, {'connected_gene': 'GC03P031804', 'score': 0.1}]
chr3	GH03I031973	31973861	31975895	1	[{'connected_gene': 'OSBPL10', 'score': 9.94}, {'connected_gene': 'ZNF860', 'score': 4.94}, {'connected_gene': 'GC03P031801', 'score': 0.09}, {'connected_gene': 'GC03P031803', 'score': 0.09}, {'connected_gene': 'PIR35964', 'score': 0.09}, {'connected_gene': 'GC03P031804', 'score': 0.09}]
chr3	GH03I031941	31941309	31942101	0.7	[{'connected_gene': 'OSBPL10', 'score': 16.92}, {'connected_gene': 'ZNF860', 'score': 11.76}, {'connected_gene': 'GC03P031801', 'score': 0.11}, {'connected_gene': 'GC03P031803', 'score': 0.11}, {'connected_gene': 'PIR35964', 'score': 0.11}, {'connected_gene': 'GC03P031804', 'score': 0.11}]
chr3	GH03I031956	31956645	31963944	1.39	[{'connected_gene': 'OSBPL10', 'score': 8.41}, {'connected_gene': 'ZNF860', 'score': 0.34}, {'connected_gene': 'GC03P031801', 'score': 0.1}, {'connected_gene': 'GC03P031803', 'score': 0.1}, {'connected_gene': 'PIR35964', 'score': 0.1}, {'connected_gene': 'GC03P031804', 'score': 0.1}]
chr3	GH03I031875	31875921	31877442	0.69	[{'connected_gene': 'OSBPL10-AS1', 'score': 10.43}, {'connected_gene': 'OSBPL10', 'score': 10.42}, {'connected_gene': 'GC03P031801', 'score': 0.18}, {'connected_gene': 'GC03P031803', 'score': 0.18}, {'connected_gene': 'PIR35964', 'score': 0.18}, {'connected_gene': 'GC03P031804', 'score': 0.18}, {'connected_gene': 'ZNF860', 'score': 0.14}]
chr3	GH03I031872	31872956	31874266	0.2	[{'connected_gene': 'OSBPL10-AS1', 'score': 10.43}, {'connected_gene': 'OSBPL10', 'score': 10.42}, {'connected_gene': 'GC03P031801', 'score': 0.19}, {'connected_gene': 'GC03P031803', 'score': 0.19}, {'connected_gene': 'PIR35964', 'score': 0.19}, {'connected_gene': 'GC03P031804', 'score': 0.19}, {'connected_gene': 'ZNF860', 'score': 0.14}]
chr3	GH03I031839	31839568	31840278	0.54	[{'connected_gene': 'GC03P031801', 'score': 0.28}, {'connected_gene': 'GC03P031803', 'score': 0.28}, {'connected_gene': 'PIR35964', 'score': 0.28}, {'connected_gene': 'GC03P031804', 'score': 0.28}, {'connected_gene': 'ZNF860', 'score': 0.11}, {'connected_gene': 'OSBPL10', 'score': 0.07}]
chr3	GH03I031832	31832649	31832798	0.2	[{'connected_gene': 'GC03P031801', 'score': 0.29}, {'connected_gene': 'GC03P031803', 'score': 0.29}, {'connected_gene': 'PIR35964', 'score': 0.29}, {'connected_gene': 'GC03P031804', 'score': 0.29}, {'connected_gene': 'ZNF860', 'score': 0.11}, {'connected_gene': 'OSBPL10', 'score': 0.07}]
chr3	GH03I031880	31880000	31880438	0.97	[{'connected_gene': 'GC03P031801', 'score': 0.18}, {'connected_gene': 'GC03P031803', 'score': 0.18}, {'connected_gene': 'PIR35964', 'score': 0.18}, {'connected_gene': 'GC03P031804', 'score': 0.18}, {'connected_gene': 'ZNF860', 'score': 0.15}, {'connected_gene': 'OSBPL10', 'score': 0.08}]
chr3	GH03I031803	31803001	31803400	0.4	[{'connected_gene': 'GC03P031801', 'score': 0.77}, {'connected_gene': 'GC03P031803', 'score': 0.77}, {'connected_gene': 'PIR35964', 'score': 0.77}, {'connected_gene': 'GC03P031804', 'score': 0.77}, {'connected_gene': 'ZNF860', 'score': 0.1}, {'connected_gene': 'OSBPL10', 'score': 0.06}]
chr3	GH03I031883	31883250	31883556	0.45	[{'connected_gene': 'GC03P031801', 'score': 0.18}, {'connected_gene': 'GC03P031803', 'score': 0.18}, {'connected_gene': 'PIR35964', 'score': 0.18}, {'connected_gene': 'GC03P031804', 'score': 0.18}, {'connected_gene': 'ZNF860', 'score': 0.15}, {'connected_gene': 'OSBPL10', 'score': 0.08}]
chr3	GH03I031530	31530334	31535401	2.31	[{'connected_gene': 'GC03M031530', 'score': 550.77}, {'connected_gene': 'STT3B', 'score': 550.77}, {'connected_gene': 'ZNF860', 'score': 10.0}, {'connected_gene': 'CMTM6', 'score': 9.75}, {'connected_gene': 'GC03P031521', 'score': 0.39}, {'connected_gene': 'GC03M031604', 'score': 0.17}]