PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000508140	[[126113781, 126113821], [126114167, 126114272], [126114784, 126114892], [126115332, 126115522], [126126014, 126126070]]	None
ENST00000352312	[[126113781, 126113821], [126114784, 126114892], [126126014, 126126095], [126132927, 126133022], [126135158, 126135351], [126137300, 126137368], [126137453, 126137617], [126137918, 126137999], [126138479, 126138661], [126138822, 126138864], [126138945, 126139072], [126142167, 126142219], [126142335, 126142487], [126151911, 126152047], [126153018, 126153224], [126154401, 126154495], [126155133, 126155398]]	[[126114843, 126114892], [126126014, 126126095], [126132927, 126133022], [126135158, 126135351], [126137300, 126137368], [126137453, 126137617], [126137918, 126137999], [126138479, 126138661], [126138822, 126138864], [126138945, 126139072], [126142167, 126142219], [126142335, 126142487], [126151911, 126152047], [126153018, 126153224], [126154401, 126154495], [126155133, 126155247]]
ENST00000393425	[[126113781, 126113821], [126114784, 126114892], [126126014, 126126095], [126132927, 126133022], [126135158, 126135351], [126137297, 126137368], [126137453, 126137617], [126137918, 126137999], [126138479, 126138661], [126138822, 126138864], [126138945, 126139072], [126142167, 126142219], [126142335, 126142487], [126151911, 126152047], [126153018, 126153224], [126154401, 126154495], [126155133, 126155398]]	[[126114843, 126114892], [126126014, 126126095], [126132927, 126133022], [126135158, 126135351], [126137297, 126137368], [126137453, 126137617], [126137918, 126137999], [126138479, 126138661], [126138822, 126138864], [126138945, 126139072], [126142167, 126142219], [126142335, 126142487], [126151911, 126152047], [126153018, 126153224], [126154401, 126154495], [126155133, 126155247]]
ENST00000510833	[[126114239, 126114272], [126114784, 126114892], [126126014, 126126095], [126132927, 126133186]]	[[126114843, 126114892], [126126014, 126126095], [126132927, 126133151]]
ENST00000505024	[[126114814, 126114892], [126126014, 126126095], [126132927, 126133022], [126135158, 126135351], [126137297, 126137368], [126137453, 126137617], [126137918, 126137999], [126138479, 126138661], [126138822, 126138864], [126138945, 126139072], [126142167, 126142219], [126142335, 126142487], [126151911, 126152047], [126153018, 126153224], [126154401, 126154495], [126155133, 126155373]]	[[126114843, 126114892], [126126014, 126126095], [126132927, 126133022], [126135158, 126135351], [126137297, 126137368], [126137453, 126137617], [126137918, 126137999], [126138479, 126138661], [126138822, 126138864], [126138945, 126139072], [126142167, 126142219], [126142335, 126142487], [126151911, 126152047], [126153018, 126153224], [126154401, 126154495], [126155133, 126155247]]
ENST00000533201	[[126135177, 126135351], [126135614, 126135706]]	None
ENST00000503905	[[126136902, 126137368], [126137453, 126137537]]	None
ENST00000507830	[[126138608, 126138661], [126138822, 126138864], [126138945, 126139072], [126139472, 126139693]]	None
ENST00000506204	[[126152222, 126152317], [126153018, 126153224], [126154401, 126154495], [126155133, 126155399]]	None
NM_182628	[[126113781, 126113821], [126114784, 126114892], [126126014, 126126095], [126132927, 126133022], [126135158, 126135351], [126137300, 126137368], [126137453, 126137617], [126137918, 126137999], [126138479, 126138661], [126138822, 126138864], [126138945, 126139072], [126142167, 126142219], [126142335, 126142487], [126151911, 126152047], [126153018, 126153224], [126154401, 126154495], [126155133, 126155398]]	[[126114843, 126114892], [126126014, 126126095], [126132927, 126133022], [126135158, 126135351], [126137300, 126137368], [126137453, 126137617], [126137918, 126137999], [126138479, 126138661], [126138822, 126138864], [126138945, 126139072], [126142167, 126142219], [126142335, 126142487], [126151911, 126152047], [126153018, 126153224], [126154401, 126154495], [126155133, 126155247]]

Promoter

Chrom	Start	End	Description
chr3	126113504	126113523	CAGE_peak_2_at_CCDC37_5end
chr3	126113734	126113794	CAGE_peak_1_at_CCDC37_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I126420	126420558	126420707	0.54	[{'connected_gene': 'CFAP100', 'score': 12.69}, {'connected_gene': 'CCDC37-AS1', 'score': 12.69}, {'connected_gene': 'LOC105374089', 'score': 0.39}]
chr3	GH03I126394	126394975	126395034	0.61	[{'connected_gene': 'CFAP100', 'score': 550.77}, {'connected_gene': 'CCDC37-AS1', 'score': 550.77}, {'connected_gene': 'LOC105374089', 'score': 0.26}]
chr3	GH03I126407	126407837	126408024	0.41	[{'connected_gene': 'KLF15', 'score': 10.63}, {'connected_gene': 'CFAP100', 'score': 0.39}, {'connected_gene': 'LOC105374089', 'score': 0.31}]
chr3	GH03I126338	126338246	126342691	0.83	[{'connected_gene': 'KLF15', 'score': 5.64}, {'connected_gene': 'CFAP100', 'score': 4.96}, {'connected_gene': 'LOC105374088', 'score': 0.31}, {'connected_gene': 'GC03P126153', 'score': 0.09}]
chr3	GH03I126353	126353025	126358521	2.68	[{'connected_gene': 'KLF15', 'score': 566.7}, {'connected_gene': 'LOC101927056', 'score': 13.88}, {'connected_gene': 'ALDH1L1', 'score': 6.58}, {'connected_gene': 'OR7E29P', 'score': 5.38}, {'connected_gene': 'CFAP100', 'score': 1.64}, {'connected_gene': 'UROC1', 'score': 1.5}, {'connected_gene': 'LOC105374088', 'score': 0.26}]
chr3	GH03I126373	126373791	126374436	0.72	[{'connected_gene': 'CCDC37-AS1', 'score': 16.0}, {'connected_gene': 'CFAP100', 'score': 11.38}, {'connected_gene': 'KLF15', 'score': 0.37}]
chr3	GH03I126266	126266196	126269629	1.3	[{'connected_gene': 'ENSG00000250934', 'score': 550.77}, {'connected_gene': 'KLF15', 'score': 10.38}, {'connected_gene': 'CFAP100', 'score': 9.96}, {'connected_gene': 'CCDC37-AS1', 'score': 9.96}, {'connected_gene': 'ALDH1L1', 'score': 9.93}, {'connected_gene': 'ALDH1L1-AS2', 'score': 7.04}, {'connected_gene': 'ENPP7P4', 'score': 4.83}, {'connected_gene': 'ENSG00000251448', 'score': 0.31}, {'connected_gene': 'GC03P126153', 'score': 0.14}]
chr3	GH03I125989	125989801	125991600	1.42	[{'connected_gene': 'PIR42058', 'score': 550.77}, {'connected_gene': 'ALG1L', 'score': 43.66}, {'connected_gene': 'FAM86JP', 'score': 34.15}, {'connected_gene': 'ROPN1B', 'score': 15.45}, {'connected_gene': 'SLC41A3', 'score': 7.84}, {'connected_gene': 'CFAP100', 'score': 2.28}, {'connected_gene': 'ZXDC', 'score': 1.74}, {'connected_gene': 'ENSG00000248607', 'score': 0.2}]