PsyMuKB

PPI network (data source: BioGrid)

A gene is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the mean normalized expression(base 2 log of (TPM+1)) +1 in all brain tissue from GTEx v7 or BrainSpan data.

A protein is determined as “expressed” when its expression values are above the pre-determined cutoff, which is the normalized expression (base 10 log of iBAQ intensity) ≥0.5 in at least one brain tissue from ProteomicsDB data. Otherwise, a gene or protein is determined as either with below-cutoff expressions or no available data.

	The queried gene/protein
	The interacting partner is expressed at mRNA-level
	The interacting partner is expressed at protein-level
	The interacting partner is expressed at both mRNA and protein level
	The interacting partner is with either below-cutoff expressions or no expression data at both mRNA and protein level
	The interacting partner is hit by coding DNMs
	Physical interaction between queried gene/protein and its partner
	Physical interaction between two interacting partners

Symbol A	GeneA coding DNM count	Symbol B	GeneB coding DNM count	Interaction detection method	Publication	Evidence
LNX1	7	GTF2E2	2	affinity chromatography technology	Lenihan JA (2017)	1
RPL31	0	RPS19	1	biochemical, biochemical	Havugimana PC (2012), Wan C (2015)	2
RPL30	1	RPS11	0	biochemical, two hybrid, biochemical	Havugimana PC (2012), Wang J (2011), Wan C (2015)	3
C1orf131	2	MYBBP1A	8	affinity chromatography technology	Blomen VA (2015)	1
CALR	1	APP	1	affinity chromatography technology, imaging technique	Johnson RJ (2001), Chen TC (2014)	2
USP2	0	EGFR	5	affinity chromatography technology	Kim J (2012)	1
MTG1	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
ZNF2	1	NSD2	9	affinity chromatography technology	Huttlin EL (2017)	1
CUL3	17	OPA1	4	affinity chromatography technology	Bennett EJ (2010)	1
KLC1	5	KLC2	2	biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Havugimana PC (2012), Kristensen AR (2012), Hein MY (2015), Hein MY (2015), Huttlin EL (2017)	5
UBQLN1	1	APP	1	two hybrid, affinity chromatography technology, fluorescent resonance energy transfe	Stieren ES (2011), Stieren ES (2011), Hiltunen M (2006)	3
GSK3B	1	SNRNP70	2	affinity chromatography technology	Ewing RM (2007)	1
CUL3	17	KCTD18	0	affinity chromatography technology	Bennett EJ (2010)	1
EGFR	5	APBB2	2	unspecified method, two hybrid, protein complementation assay, affinity chromatography technology	Jones RB (2006), Kotlyar M (2015), Petschnigg J (2014), Petschnigg J (2014)	4
CUL3	17	RPUSD2	1	biochemical	Wan C (2015)	1
AEBP2	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
VPS29	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
APP	1	PSEN1	11	two hybrid, affinity chromatography technology	Soler-Lopez M (2011), Soler-Lopez M (2011)	2
CDC20	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CUL3	17	MRPL49	0	affinity chromatography technology	Bennett EJ (2010)	1
C8orf33	3	SF3B2	7	two hybrid	Vinayagam A (2011)	1
MAPK8	3	ELK1	2	enzymatic study, enzymatic study, two hybrid, enzymatic study	Cano E (1995), Gupta S (1996), Yao K (2007), Cavigelli M (1995)	4
ZC3H3	4	NSD2	9	affinity chromatography technology	Huttlin EL (2015)	1
RPL30	1	DDX10	4	affinity chromatography technology	Huttlin EL (2017)	1
MAK	3	ICK	1	affinity chromatography technology	Boldt K (2016)	1
RPS19	1	RPL36	0	biochemical	Wan C (2015)	1
TRAF3IP1	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
GGA1	0	APP	1	affinity chromatography technology, pull down	Wahle T (2006), Wahle T (2006)	2
AURKA	1	GSK3B	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Kwon YW (2012), Chou CH (2013), Chou CH (2013)	3
PSEN1	11	CTNND1	4	two hybrid, pull down, affinity chromatography technology, affinity chromatography technology	Tanahashi H (1999), Tanahashi H (1999), Tanahashi H (1999), Shrestha H (2017)	4
ZNF2	1	GNL2	1	affinity chromatography technology	Huttlin EL (2017)	1
YWHAG	5	KLC4	2	affinity chromatography technology	Ewing RM (2007)	1
SOCS5	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PTPN12	2	SHC1	0	two hybrid, affinity chromatography technology, pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, bioid, affinity chromatography technology	Habib T (1994), Charest A (1996), Charest A (1996), Habib T (1994), Habib T (1994), Brehme M (2009), Li J (2013), St-Denis N (2016), St-Denis N (2016), Huttlin EL (2017)	10
CSNK1G1	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
GTF2E2	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RPS10	0	RPS19	1	biochemical, biochemical, biochemical	Havugimana PC (2012), Kristensen AR (2012), Wan C (2015)	3
CMTM2	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RAD51AP1	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RPL30	1	RPS26	1	biochemical, biochemical	Havugimana PC (2012), Wan C (2015)	2
ZC3H3	4	HIST2H2AB	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
POLD3	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
SYNCRIP	6	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CLU	1	GPAM	3	affinity chromatography technology	Hein MY (2015)	1
DDX10	4	DDX54	1	biochemical	Wan C (2015)	1
DDX54	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
MRM3	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PDZD4	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
MAPK7	1	YWHAG	5	affinity chromatography technology	Erazo T (2013)	1
EGFR	5	GAPDH	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, protein complementation assay	Foerster S (2013), Wu SL (2006), Wu SL (2006), Kotlyar M (2015), Petschnigg J (2014)	5
RPS11	0	RPS16	2	biochemical, biochemical	Havugimana PC (2012), Wan C (2015)	2
CUL3	17	HSD17B10	1	affinity chromatography technology	Bennett EJ (2010)	1
RBM42	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
KLC1	5	APP	1	pull down, affinity chromatography technology	Kamal A (2000), Muresan Z (2005)	2
KLC4	2	KLC2	2	biochemical, affinity chromatography technology, affinity chromatography technology	Kristensen AR (2012), Hein MY (2015), Hein MY (2015)	3
MAPRE1	0	BLMH	0	affinity chromatography technology	Hein MY (2015)	1
SHC1	0	DNM2	2	affinity chromatography technology	Brehme M (2009)	1
CUL3	17	RPS16	2	affinity chromatography technology	Bennett EJ (2010)	1
HP1BP3	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
APP	1	GSK3B	1	affinity chromatography technology, affinity chromatography technology, pull down	Zhou F (2012), Zhou F (2012), Olah J (2011)	3
RPL30	1	MYBBP1A	8	affinity chromatography technology	Huttlin EL (2017)	1
ZNF35	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CDCA7	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
BCAP31	0	APP	1	protein complementation assay, imaging technique, affinity chromatography technology, affinity chromatography technology	Wang B (2003), Wang B (2003), Wang B (2003), Wang B (2003)	4
APP	1	MAPT	1	pull down, unspecified method	Guo JP (2006), Guo JP (2006)	2
TAF6	4	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CUL3	17	MRPL24	0	affinity chromatography technology	Bennett EJ (2010)	1
SENP2	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CDC20	1	HSPD1	0	affinity chromatography technology	Fogeron ML (2013)	1
MCM7	5	UBQLN1	1	two hybrid	Rolland T (2014)	1
SHC1	0	RPS19	1	affinity chromatography technology	Brehme M (2009)	1
NOTCH1	25	PHF8	6	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Yatim A (2012), Yatim A (2012), Yatim A (2012)	3
HDAC4	10	PRKN	1	affinity chromatography technology	Um JW (2006)	1
STUB1	4	SNCA	0	enzymatic study, affinity chromatography technology, affinity chromatography technology	Kalia LV (2011), Kalia LV (2011), Tetzlaff JE (2008)	3
NOB1	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
EGFR	5	HK1	5	affinity chromatography technology	Tong J (2014)	1
MYOT	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PSEN1	11	MAPT	1	biochemical	Takashima A (1998)	1
CUL3	17	DDX18	2	affinity chromatography technology	Bennett EJ (2010)	1
MAPK8	3	HIST2H2AA3	0	affinity chromatography technology	Hein MY (2015)	1
ZNF2	1	TAF1B	0	affinity chromatography technology	Huttlin EL (2017)	1
CSNK1D	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
APBB1	3	EGFR	5	unspecified method	Jones RB (2006)	1
COPS5	0	HSPD1	0	affinity chromatography technology	Bennett EJ (2010)	1
PPAN	0	ZNF574	3	affinity chromatography technology	Huttlin EL (2017)	1
APBA3	2	EGFR	5	unspecified method	Jones RB (2006)	1
COPS5	0	BLMH	0	affinity chromatography technology	Bennett EJ (2010)	1
DDX18	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PRKN	1	HSD17B10	1	pull down, enzymatic study, fluorescent resonance energy transfe	Bertolin G (2015), Bertolin G (2015), Bertolin G (2015)	3
RPS10	0	RPL30	1	biochemical	Wan C (2015)	1
CUL3	17	RPS19	1	affinity chromatography technology	Bennett EJ (2010)	1
CAMKK2	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
MAPT	1	SNCA	0	pull down, biochemical, pull down, affinity chromatography technology, imaging technique, affinity chromatography technology	Jensen PH (1999), Jensen PH (1999), Kawakami F (2011), Benussi L (2005), Esposito A (2007), Qureshi HY (2011)	6
TSLP	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CAV1	0	CUL3	17	affinity chromatography technology, affinity chromatography technology	Dubiel D (2017), Dubiel D (2017)	2
ZNF2	1	ZC3HAV1	4	affinity chromatography technology	Huttlin EL (2017)	1
TRIM41	6	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RBM42	0	SF3B2	7	biochemical	Havugimana PC (2012)	1
CUL3	17	AURKA	1	affinity chromatography technology	Moghe S (2012)	1
COPS5	0	RPS19	1	affinity chromatography technology	Bennett EJ (2010)	1
KLC4	2	EPB41L2	2	affinity chromatography technology	Hein MY (2015)	1
C1orf87	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RPL31	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
NOL7	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
DDX43	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CCDC33	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
MRPS18A	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
DKFZP434K028	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RPL30	1	GNL2	1	affinity chromatography technology	Huttlin EL (2017)	1
OR4D6	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CUL3	17	GAPDH	0	affinity chromatography technology	Bennett EJ (2010)	1
APP	1	IFIT3	1	two hybrid, affinity chromatography technology	Soler-Lopez M (2011), Soler-Lopez M (2011)	2
SYNCRIP	6	APBB2	2	affinity chromatography technology	Hein MY (2015)	1
RPL36	0	RPS11	0	biochemical	Wan C (2015)	1
MAPT	1	PRKN	1	affinity chromatography technology, affinity chromatography technology	Moore DJ (2008), Petrucelli L (2004)	2
CUL3	17	RPS11	0	affinity chromatography technology	Bennett EJ (2010)	1
HGS	5	UBQLN1	1	two hybrid, affinity chromatography technology	Rual JF (2005), Regan-Klapisz E (2005)	2
PSEN1	11	NOTCH1	25	affinity chromatography technology	Ray WJ (1999)	1
ABCF1	5	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PSEN1	11	NOS3	7	two hybrid	Soler-Lopez M (2011)	1
PPAN	0	GNL2	1	affinity chromatography technology	Huttlin EL (2017)	1
DZIP1L	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
EGFR	5	CCDC60	1	affinity chromatography technology	Yao Z (2017)	1
YWHAG	5	COPS5	0	two hybrid	Bandyopadhyay S (2010)	1
CTNNA1	7	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
EIF2S2	0	ATP5C1	0	affinity chromatography technology	Trakman L (2016)	1
TBPL1	0	TAF6	4	affinity chromatography technology	Jeronimo C (2007)	1
APBA2	1	CLSTN1	0	two hybrid, affinity chromatography technology, affinity chromatography technology	Araki Y (2003), Araki Y (2004), Araki Y (2003)	3
KDR	4	PTPN12	2	two hybrid	Yao Z (2017)	1
CUL3	17	PLRG1	1	affinity chromatography technology	Bennett EJ (2010)	1
HGS	5	APP	1	pull down, pull down, pull down	Pridgeon JW (2009), Olah J (2011), Virok DP (2011)	3
FGF12	4	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
KDR	4	YWHAG	5	affinity chromatography technology	Hein MY (2015)	1
CPEB1	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
DAB1	1	APP	1	pull down, pull down	Homayouni R (1999), Olah J (2011)	2
COPS5	0	MCM7	5	affinity chromatography technology	Bennett EJ (2010)	1
FBXL2	2	APP	1	affinity chromatography technology, enzymatic study	Watanabe T (2012), Watanabe T (2012)	2
NOLC1	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
ADARB1	5	C1orf35	1	affinity chromatography technology	Li S (2014)	1
POLL	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
AURKA	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
IL18RAP	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
MYBBP1A	8	RPS11	0	biochemical	Havugimana PC (2012)	1
KCNAB1	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
MCM10	2	APP	1	pull down, affinity chromatography technology	Olah J (2011), Huttlin EL (2017)	2
ZFC3H1	6	ZC3H3	4	affinity chromatography technology	Hein MY (2015)	1
NUMB	1	APP	1	pull down, imaging technique	Olah J (2011), Chen TC (2014)	2
UTP4	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RPS18	1	RPS16	2	biochemical, biochemical	Kristensen AR (2012), Wan C (2015)	2
GTPBP1	4	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
TRIM41	6	APBA2	1	affinity chromatography technology	Huttlin EL (2017)	1
EME1	3	APP	1	pull down, affinity chromatography technology	Olah J (2011), Huttlin EL (2017)	2
EGFR	5	MAPK8IP1	7	unspecified method	Jones RB (2006)	1
KLC1	5	NOLC1	2	affinity chromatography technology	Hein MY (2015)	1
PPAN	0	MRPL3	0	affinity chromatography technology	Huttlin EL (2017)	1
HGS	5	NOTCH1	25	affinity chromatography technology	Sjoeqvist M (2014)	1
LNX1	7	CSNK1D	3	affinity chromatography technology	Lenihan JA (2017)	1
CFAP58	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
SHC1	0	APP	1	pull down, affinity chromatography technology	Tarr PE (2002), Tarr PE (2002)	2
C9orf43	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CUL3	17	YWHAG	5	affinity chromatography technology	Bennett EJ (2010)	1
EGFR	5	CLU	1	affinity chromatography technology	Tong J (2014)	1
LMX1B	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
OPA1	4	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
EGFR	5	PDIA3	0	affinity chromatography technology	Foerster S (2013)	1
EGFR	5	SNCA	0	two hybrid, protein complementation assay, affinity chromatography technology	Kotlyar M (2015), Petschnigg J (2014), Petschnigg J (2014)	3
RNF32	0	PSEN1	11	two hybrid	Soler-Lopez M (2011)	1
MAPK8	3	MAPT	1	enzymatic study	Goedert M (1997)	1
KAT5	1	APP	1	two hybrid, fluorescent resonance energy transfe, fluorescent resonance energy transfe, affinity chromatography technology, affinity chromatography technology, two hybrid, two hybrid, pull down	Sumioka A (2005), Kinoshita A (2002), von Rotz RC (2004), von Rotz RC (2004), von Rotz RC (2004), Cao X (2004), Li Q (2004), Olah J (2011)	8
GSK3B	1	PSEN1	11	enzymatic study	Prager K (2007)	1
CSNK1D	3	KDR	4	affinity chromatography technology, enzymatic study	Shaik S (2012), Shaik S (2012)	2
CTNND1	4	CSNK1E	0	affinity chromatography technology	Del Valle-Perez B (2011)	1
EGFR	5	EPB41L2	2	affinity chromatography technology	Yao Z (2017)	1
DAB1	1	LNX1	7	two hybrid	Rolland T (2014)	1
COPS5	0	SNRNP70	2	affinity chromatography technology	Bennett EJ (2010)	1
CCDC60	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
TTLL7	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PIMREG	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
AGO4	5	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
UPF3A	2	GSK3B	1	two hybrid	Lehner B (2004)	1
PRKN	1	OPA1	4	affinity chromatography technology	Zanon A (2013)	1
TCEANC2	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RPL30	1	ZC3HAV1	4	affinity chromatography technology	Huttlin EL (2017)	1
CTNND1	4	GSK3B	1	affinity chromatography technology, affinity chromatography technology	Shrestha H (2017), Shrestha H (2017)	2
UBE2M	0	CUL3	17	enzymatic study, pull down	Huang G (2011), Schumacher FR (2015)	2
UBE2M	0	APP	1	enzymatic study, pull down	Lee MR (2008), Olah J (2011)	2
NOS3	7	APP	1	affinity chromatography technology, two hybrid	Soler-Lopez M (2011), Soler-Lopez M (2011)	2
HDAC4	10	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CCDC59	1	SYNCRIP	6	affinity chromatography technology	Huttlin EL (2017)	1
SART1	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
AGO4	5	RPS18	1	affinity chromatography technology	Weinmann L (2009)	1
EIF2S2	0	RPS10	0	affinity chromatography technology	Trakman L (2016)	1
KCNK5	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CARNMT1	2	TAB2	5	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
ING2	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PRKN	1	MCM7	5	affinity chromatography technology	Zanon A (2013)	1
NEIL1	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
EGFR	5	DDX20	4	affinity chromatography technology	Foerster S (2013)	1
COPS5	0	CDC20	1	affinity chromatography technology	Bennett EJ (2010)	1
RPS16	2	RPL3L	2	biochemical	Wan C (2015)	1
TP53TG5	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
DNM2	2	GGA1	0	biochemical	Wan C (2015)	1
CUL3	17	RPL36	0	affinity chromatography technology	Bennett EJ (2010)	1
ZC3HAV1	4	LLPH	0	affinity chromatography technology	Huttlin EL (2017)	1
DNM2	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
KIF2C	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
TCEANC	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RPS10	0	RPS26	1	biochemical, biochemical, biochemical	Havugimana PC (2012), Kristensen AR (2012), Wan C (2015)	3
CLU	1	HSPD1	0	affinity chromatography technology, affinity chromatography technology, pull down	Chaiwatanasirikul KA (2011), Chaiwatanasirikul KA (2011), Chaiwatanasirikul KA (2011)	3
GSN	3	PTPN12	2	affinity chromatography technology	Chellaiah MA (2001)	1
ZC3H3	4	MRPL34	2	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
ZC3H3	4	LLPH	0	affinity chromatography technology	Huttlin EL (2015)	1
UPF3A	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
AURKA	1	RPL30	1	affinity chromatography technology	Fogeron ML (2013)	1
APBA2	1	APBA1	6	affinity chromatography technology	Huttlin EL (2017)	1
MAPRE1	0	CTNNA1	7	affinity chromatography technology	Hein MY (2015)	1
NOS3	7	RNF32	0	two hybrid	Soler-Lopez M (2011)	1
RPL31	0	RPS16	2	biochemical, biochemical	Havugimana PC (2012), Wan C (2015)	2
CAV1	0	KCNN3	1	affinity chromatography technology	Gao Y (2012)	1
YWHAG	5	CDK17	1	affinity chromatography technology	Jin J (2004)	1
ZFC3H1	6	CARNMT1	2	affinity chromatography technology	Huttlin EL (2017)	1
RPS18	1	RPS10	0	biochemical, biochemical	Kristensen AR (2012), Wan C (2015)	2
GPANK1	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
APBA3	2	CLSTN1	0	affinity chromatography technology	Huttlin EL (2017)	1
COPS5	0	HSD17B10	1	affinity chromatography technology	Bennett EJ (2010)	1
RPL31	0	RPS11	0	biochemical, biochemical	Havugimana PC (2012), Wan C (2015)	2
C8orf33	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
KAT5	1	APBB1	3	affinity chromatography technology, affinity chromatography technology, two hybrid, affinity chromatography technology, two hybrid, two hybrid, affinity chromatography technology	Kim SY (2007), Sumioka A (2005), Sumioka A (2005), von Rotz RC (2004), Cao X (2004), Li Q (2004), Matz A (2014)	7
PDIA3	0	CLU	1	affinity chromatography technology, affinity chromatography technology	Jessop CE (2007), Hein MY (2015)	2
ATP5C1	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
ELK1	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PLRG1	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RPL36	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
UBE2M	0	PRKN	1	enzymatic study	Choo YS (2012)	1
ARL4D	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RPS16	2	RPS19	1	biochemical, biochemical, biochemical	Havugimana PC (2012), Kristensen AR (2012), Wan C (2015)	3
COPS5	0	ZC3HAV1	4	affinity chromatography technology	Bennett EJ (2010)	1
COPS5	0	GAPDH	0	affinity chromatography technology	Bennett EJ (2010)	1
COPS5	0	CUL3	17	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Sowa ME (2009), Choo YY (2011), Bennett EJ (2010), Bennett EJ (2010), Bennett EJ (2010), Olma MH (2009), Olma MH (2009), Huttlin EL (2017)	8
NSD2	9	MYBBP1A	8	affinity chromatography technology	Mirabella F (2014)	1
ZNF684	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
SNCA	0	MAPK8	3	affinity chromatography technology	Pan ZZ (2002)	1
EGFR	5	DNM2	2	affinity chromatography technology	Tong J (2014)	1
RPS19	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PRKN	1	SYNCRIP	6	affinity chromatography technology	Zanon A (2013)	1
ZNF574	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
DEDD	0	CCDC59	1	affinity chromatography technology	Ewing RM (2007)	1
EGFR	5	ZC3HAV1	4	affinity chromatography technology	Yao Z (2017)	1
ETV3	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
MRPL34	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
APP	1	APBA2	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, two hybrid, pull down	Araki Y (2003), Araki Y (2003), Biederer T (2002), Biederer T (2002), Tomita S (1999), Tomita S (1999)	6
RPS11	0	RPS26	1	biochemical, biochemical	Havugimana PC (2012), Wan C (2015)	2
SNCA	0	CRYAB	0	pull down, x-ray crystallography, pull down, biochemical, pull down	Rekas A (2004), Rekas A (2004), Bruinsma IB (2011), Waudby CA (2010), Waudby CA (2010)	5
RPS16	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
TAF1B	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
EGFR	5	SHC1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, unspecified method, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, protein complementation assay, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, two hybrid, affinity chromatography technology, pull down, affinity chromatography technology	Schulze WX (2006), Sakaguchi K (1998), Tong J (2009), Crovello CS (1998), Graus-Porta D (1997), Oksvold MP (2001), Burke P (2001), Katayama H (1999), Tong J (2008), Zhang L (1999), Levkowitz G (1999), Fukazawa T (1996), Jones RB (2006), Sigismund S (2013), Foerster S (2013), Gotoh N (1994), Tong J (2014), Kotlyar M (2015), Petschnigg J (2014), Petschnigg J (2014), Li J (2013), Li J (2013), Prigent SA (1996), Prigent SA (1996), Grosse R (2000), Yao Z (2017), Wills MK (2014), Wills MK (2014), Kapoor GS (2010)	29
MRPL24	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RNF32	0	BLMH	0	two hybrid	Soler-Lopez M (2011)	1
CDK17	1	GAPDH	0	affinity chromatography technology	Varjosalo M (2013)	1
ZNF2	1	DDX10	4	affinity chromatography technology	Huttlin EL (2017)	1
PRKN	1	STUB1	4	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology	Imai Y (2002), Imai Y (2002), Imai Y (2002), Imai Y (2003), Zhu X (2017)	5
GSK3B	1	GAPDH	0	two hybrid	Vinayagam A (2011)	1
RPS18	1	RPL31	0	biochemical	Wan C (2015)	1
MCM7	5	VPS29	0	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
APP	1	STUB1	4	affinity chromatography technology, affinity chromatography technology	Kumar P (2007), Kumar P (2007)	2
GNL2	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
TCF19	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
GSAP	3	APP	1	affinity chromatography technology, affinity chromatography technology, enzymatic study, protein complementation assay	He G (2010), He G (2010), He G (2010), Savolainen MH (2015)	4
COPS5	0	C7orf50	2	affinity chromatography technology	Bennett EJ (2010)	1
KLC1	5	KLC4	2	biochemical, biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Havugimana PC (2012), Kristensen AR (2012), Hein MY (2015), Hein MY (2015), Huttlin EL (2017)	5
RPS10	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
UBE2M	0	COPS5	0	affinity chromatography technology	Huttlin EL (2017)	1
CDC20	1	CUL3	17	affinity chromatography technology	Wu F (2017)	1
NOB1	2	GNL2	1	biochemical	Wan C (2015)	1
RPL31	0	RPS26	1	biochemical, biochemical	Havugimana PC (2012), Wan C (2015)	2
KIF3A	4	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
APP	1	APP	1	pull down, pull down, pull down	Sakono M (2012), Vilardo E (2013), Narayan P (2012)	3
MAPRE1	0	KIF2C	1	pull down, affinity chromatography technology, affinity chromatography technology	Xia P (2012), Hein MY (2015), Boldt K (2016)	3
RPL41	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CSNK1E	0	WDR5	2	affinity chromatography technology	Varjosalo M (2013)	1
KLF12	5	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PHF8	6	WDR5	2	affinity chromatography technology, imaging technique	Feng W (2010), Feng W (2010)	2
PLK1	0	SNCA	0	enzymatic study	Mbefo MK (2010)	1
CCDC60	1	FAM32A	1	affinity chromatography technology	Huttlin EL (2017)	1
TGFBR2	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
IQCH	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
SYNCRIP	6	DDX54	1	affinity chromatography technology	Huttlin EL (2017)	1
PTGS2	0	COPS5	0	biochemical, affinity chromatography technology, pull down	Neuss H (2007), Neuss H (2007), Neuss H (2007)	3
PPAN	0	DDX54	1	affinity chromatography technology	Huttlin EL (2017)	1
CELF2	5	PTGS2	0	unspecified method	Sureban SM (2007)	1
CARNMT1	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
AGO4	5	ATP5C1	0	affinity chromatography technology	Weinmann L (2009)	1
RPUSD2	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
UBE2M	0	NAE1	0	affinity chromatography technology, x-ray crystallography, pull down, enzymatic study, affinity chromatography technology	Ewing RM (2007), Huang DT (2007), Souphron J (2008), Huang DT (2009), Huttlin EL (2017)	5
APP	1	MAPK8IP1	7	two hybrid, pull down, enzymatic study, affinity chromatography technology, affinity chromatography technology	Kajiwara Y (2010), Scheinfeld MH (2003), Scheinfeld MH (2003), Muresan Z (2005), Muresan Z (2005)	5
ATP5C1	0	EGFR	5	two hybrid, affinity chromatography technology	Stelzl U (2005), Tong J (2009)	2
PRKN	1	HK1	5	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Okatsu K (2012), Sarraf SA (2013), Sarraf SA (2013)	3
RPS18	1	RPS26	1	biochemical, biochemical	Kristensen AR (2012), Wan C (2015)	2
375260	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
EGFR	5	TRMT2A	4	affinity chromatography technology	Tong J (2014)	1
KAT5	1	YWHAG	5	two hybrid	Sumioka A (2005)	1
HP1BP3	2	NUSAP1	0	affinity chromatography technology	Huttlin EL (2017)	1
SNRNP70	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
HSPD1	0	APP	1	affinity chromatography technology, pull down	Kumar P (2007), Olah J (2011)	2
CDKL3	1	GGA1	0	two hybrid	Wang J (2011)	1
TBPL1	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
COPS5	0	DDX18	2	affinity chromatography technology	Bennett EJ (2010)	1
CPEB1	0	APBA3	2	affinity chromatography technology	Huttlin EL (2017)	1
CDC20	1	PLK1	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study	Sedgwick GG (2012), Hyun SY (2013), Hyun SY (2013), Hyun SY (2013), Jia L (2016)	5
APP	1	NAE1	0	pull down, affinity chromatography technology	Chow N (1996), Chow N (1996)	2
FAM32A	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RPL36	0	RPS16	2	biochemical, biochemical	Havugimana PC (2012), Wan C (2015)	2
ZC3HAV1	4	RPL36	0	affinity chromatography technology	Huttlin EL (2017)	1
GSK3B	1	HDAC4	10	enzymatic study	Cernotta N (2011)	1
TBX22	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
EPB41L2	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
GSK3B	1	MAPT	1	enzymatic study, enzymatic study, affinity chromatography technology, affinity chromatography technology, enzymatic study, enzymatic study, pull down, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study, enzymatic study	Shimura H (2004), Wang JZ (1998), Richet E (2012), Richet E (2012), Schneider A (1999), Kawakami F (2011), Kawakami F (2011), Zheng-Fischhoefer Q (1998), Virdee K (2007), Liu F (2002), Sadik G (2009), Sasaki K (2009), Liu F (2006), Watcharasit P (2002)	14
PLK1	0	HMCES	1	affinity chromatography technology	Hein MY (2015)	1
TFPI	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CLIP4	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
COPS5	0	GSK3B	1	affinity chromatography technology	Huang X (2009)	1
HSPD1	0	GAPDH	0	biochemical	Havugimana PC (2012)	1
COPS5	0	CTNNA1	7	affinity chromatography technology	Bennett EJ (2010)	1
PRKN	1	CALR	1	affinity chromatography technology	Zanon A (2013)	1
RPL30	1	RPS16	2	biochemical, biochemical	Havugimana PC (2012), Wan C (2015)	2
PNKD	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
NUSAP1	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CSNK1D	3	NOB1	2	biochemical	Wan C (2015)	1
SNCA	0	KLC1	5	unspecified method	Woods WS (2007)	1
PATL1	4	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RPS10	0	RPS11	0	biochemical, biochemical, biochemical	Havugimana PC (2012), Kristensen AR (2012), Wan C (2015)	3
UTP23	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PRKN	1	SET	8	affinity chromatography technology	Zanon A (2013)	1
IFIT3	1	SNRNP70	2	affinity chromatography technology	Pichlmair A (2011)	1
CCDC190	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
APP	1	COL25A1	1	pull down, imaging technique, pull down, unspecified method	Hashimoto T (2002), Hashimoto T (2002), Soederberg L (2005), Soederberg L (2005)	4
COPS5	0	RBM42	0	affinity chromatography technology	Bennett EJ (2010)	1
PTGS2	0	CAV1	0	affinity chromatography technology, affinity chromatography technology, pull down, affinity chromatography technology, biochemical, pull down, affinity chromatography technology, affinity chromatography technology, pull down	Liou JY (2001), Liou JY (2001), Liou JY (2001), Chen SF (2010), Liou JY (2001), Liou JY (2001), Chen SF (2013), Chen SF (2013), Chen SF (2013)	9
SNRNP70	2	GTPBP1	4	affinity chromatography technology	Huttlin EL (2017)	1
APP	1	SNCA	0	pull down, pull down, affinity chromatography technology, affinity chromatography technology, pull down, pull down, imaging technique	Jensen PH (1997), Yoshimoto M (1995), Tsigelny IF (2008), Tsigelny IF (2008), Tsigelny IF (2008), Olah J (2011), Chen TC (2014)	7
RPS19	1	RPS18	1	biochemical	Kristensen AR (2012)	1
CUL3	17	HP1BP3	2	affinity chromatography technology	Bennett EJ (2010)	1
PRKN	1	HSPD1	0	affinity chromatography technology	Zanon A (2013)	1
RPS11	0	RPS19	1	biochemical, biochemical	Havugimana PC (2012), Wan C (2015)	2
PRKN	1	APP	1	affinity chromatography technology, imaging technique	Rosen KM (2010), Lonskaya I (2012)	2
OR2W1	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CUL3	17	MCM7	5	affinity chromatography technology, affinity chromatography technology	Bennett EJ (2010), Rutz N (2015)	2
CSNK1D	3	MAPT	1	enzymatic study, enzymatic study	Yin H (2006), Wolff S (2006)	2
GSAP	3	PSEN1	11	affinity chromatography technology	He G (2010)	1
SPZ1	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RPL30	1	NSD2	9	affinity chromatography technology	Huttlin EL (2017)	1
AURKA	1	RPS11	0	affinity chromatography technology	Fogeron ML (2013)	1
SYVN1	2	CLU	1	pull down	Nizard P (2007)	1
KDR	4	DNM2	2	affinity chromatography technology	Bhattacharya R (2005)	1
CUL3	17	ZC3HAV1	4	affinity chromatography technology	Bennett EJ (2010)	1
LNX1	7	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
HP1BP3	2	NOP16	2	biochemical	Havugimana PC (2012)	1
SNRNP70	2	SRSF8	0	affinity chromatography technology	Huttlin EL (2017)	1
TRMT2A	4	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CCDC59	1	SNRNP70	2	affinity chromatography technology	Huttlin EL (2017)	1
AURKA	1	RPS19	1	affinity chromatography technology	Fogeron ML (2013)	1
CUL3	17	RPL30	1	affinity chromatography technology	Bennett EJ (2010)	1
RPL36	0	RPL3L	2	biochemical	Wan C (2015)	1
SENP1	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
LNX1	7	PAK6	0	affinity chromatography technology	Wolting CD (2011)	1
PTTG2	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
LAMC1	5	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
ANKZF1	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PDIA3	0	APP	1	pull down, pull down	Olah J (2011), Erickson RR (2005)	2
RPL3L	2	RPL30	1	biochemical	Wan C (2015)	1
APP	1	APBA1	6	affinity chromatography technology, pull down, pull down, pull down, affinity chromatography technology	Biederer T (2002), Biederer T (2002), Borg JP (1996), Borg JP (1996), Borg JP (1996)	5
C1orf35	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RPL36	0	RPS26	1	biochemical	Wan C (2015)	1
APP	1	FBLN1	1	two hybrid, pull down, affinity chromatography technology	Ohsawa I (2001), Ohsawa I (2001), Ohsawa I (2001)	3
EGFR	5	SOCS5	0	affinity chromatography technology	Kario E (2005)	1
EGFR	5	PLK1	0	affinity chromatography technology	Tong J (2014)	1
PSEN1	11	CTNNA1	7	affinity chromatography technology	Georgakopoulos A (1999)	1
PHF7	5	TRIM41	6	two hybrid	Woodsmith J (2012)	1
CCDC59	1	MYBBP1A	8	affinity chromatography technology	Huttlin EL (2017)	1
USP2	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
EGFR	5	MRM3	0	affinity chromatography technology	Tong J (2014)	1
CUL3	17	C8orf33	3	affinity chromatography technology	Bennett EJ (2010)	1
MAPK7	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
COPS5	0	SYNCRIP	6	affinity chromatography technology	Bennett EJ (2010)	1
MTFMT	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PRICKLE2	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
AICDA	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
HK1	5	SNCA	0	affinity chromatography technology	Huttlin EL (2017)	1
CUL3	17	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PRKN	1	AURKA	1	affinity chromatography technology	Lee SB (2015)	1
APBB1	3	APP	1	pull down, pull down, affinity chromatography technology, pull down, affinity chromatography technology, pull down, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, protein complementation assay, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Borg JP (1996), Borg JP (1996), Borg JP (1996), Zambrano N (1997), Guenette SY (1996), Tanahashi H (1999), Trommsdorff M (1998), Trommsdorff M (1998), Kim SY (2007), Sumioka A (2005), von Rotz RC (2004), Cao X (2004), Cao X (2004), Kajiwara Y (2010), Viswanathan J (2013), Lee MR (2008), Huttlin EL (2017)	17
DDX18	2	RPL36	0	biochemical	Wan C (2015)	1
RTF1	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
EIF2S2	0	RPS19	1	affinity chromatography technology	Trakman L (2016)	1
ADARB1	5	C7orf50	2	affinity chromatography technology	Li S (2014)	1
SYNCRIP	6	SNRNP70	2	biochemical, affinity chromatography technology	Havugimana PC (2012), Huttlin EL (2017)	2
SF3B2	7	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
ZC3HAV1	4	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
ZNF622	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
USP6NL	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
ZC3HAV1	4	HP1BP3	2	affinity chromatography technology	Huttlin EL (2017)	1
RPS19	1	RPL30	1	biochemical	Wan C (2015)	1
CSNK1E	0	NOB1	2	biochemical	Wan C (2015)	1
PHF8	6	UPF3A	2	affinity chromatography technology	Hein MY (2015)	1
YWHAG	5	HDAC4	10	pull down, affinity chromatography technology, affinity chromatography technology, two hybrid	Miska EA (2001), Jin J (2004), Joshi P (2013), Rolland T (2014)	4
APP	1	APPBP2	3	two hybrid, pull down, affinity chromatography technology	Zheng P (1998), Zheng P (1998), Briand S (2011)	3
RPL30	1	LLPH	0	affinity chromatography technology	Huttlin EL (2017)	1
HSPD1	0	PDIA3	0	biochemical	Kristensen AR (2012)	1
CRYAB	0	DDX20	4	two hybrid, affinity chromatography technology, affinity chromatography technology	den Engelsman J (2013), den Engelsman J (2013), Huttlin EL (2015)	3
KDR	4	APP	1	pull down, affinity chromatography technology, affinity chromatography technology	Patel NS (2010), Patel NS (2010), Patel NS (2010)	3
CDCA7	1	YWHAG	5	affinity chromatography technology	Huttlin EL (2017)	1
MRPL35	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
EGFR	5	TRAF3IP1	3	affinity chromatography technology	Yao Z (2017)	1
MRPL35	1	MRPL49	0	affinity chromatography technology	Huttlin EL (2017)	1
PPAN	0	ZNF22	0	affinity chromatography technology	Huttlin EL (2017)	1
PRKN	1	ATP5C1	0	affinity chromatography technology	Zanon A (2013)	1
GSK3B	1	NOTCH1	25	enzymatic study, pull down	Foltz DR (2002), Foltz DR (2002)	2
RPL30	1	RPL36	0	biochemical, biochemical, affinity chromatography technology	Havugimana PC (2012), Wan C (2015), Huttlin EL (2017)	3
MAPK8	3	APP	1	pull down, enzymatic study, pull down	Olah J (2011), Scheinfeld MH (2003), Scheinfeld MH (2003)	3
C7orf50	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
554236	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
ZNF2	1	ZNF22	0	affinity chromatography technology	Huttlin EL (2017)	1
MCM10	2	MCM7	5	biochemical, pull down, affinity chromatography technology, affinity chromatography technology	Izumi M (2000), Ramachandran N (2004), Huttlin EL (2015), Huttlin EL (2017)	4
MAK	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
APP	1	ZC3H3	4	pull down, affinity chromatography technology	Virok DP (2011), Huttlin EL (2017)	2
FILIP1	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
COPS5	0	RPS16	2	affinity chromatography technology	Bennett EJ (2010)	1
DDX55	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
NOTCH1	25	APBB1	3	genetic interference, affinity chromatography technology	Kim SY (2007), Kim SY (2007)	2
C1orf131	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
COPS5	0	DDX20	4	affinity chromatography technology	Bennett EJ (2010)	1
LLPH	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PSRC1	0	AURKA	1	biochemical	Havugimana PC (2012)	1
SCEL	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
EGFR	5	SERAC1	3	affinity chromatography technology	Li J (2013)	1
YWHAG	5	EPB41L2	2	two hybrid, affinity chromatography technology	Bandyopadhyay S (2010), Huttlin EL (2017)	2
PRKN	1	RPS19	1	affinity chromatography technology	Zanon A (2013)	1
TIGD1	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
KDR	4	CAV1	0	biochemical	Tiwari A (2013)	1
TSPYL1	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
EGFR	5	APP	1	two hybrid, protein complementation assay	Kotlyar M (2015), Petschnigg J (2014)	2
RPS11	0	MRPL24	0	biochemical	Wan C (2015)	1
GAPDH	0	KAT5	1	two hybrid	Goehler H (2004)	1
APBB2	2	APP	1	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Chang Y (2003), Huttlin EL (2015), Huttlin EL (2017)	3
SNRNP70	2	UBQLN1	1	biochemical	Havugimana PC (2012)	1
KIF2C	1	PLK1	0	affinity chromatography technology, enzymatic study	Sanhaji M (2014), Sanhaji M (2014)	2
RNF32	0	APP	1	pull down, two hybrid, pull down	Olah J (2011), Soler-Lopez M (2011), Virok DP (2011)	3
SURF2	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CDK17	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
HIST2H2AA3	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
SNCA	0	GAPDH	0	two hybrid, pull down	Vinayagam A (2011), Tsuchiya K (2005)	2
MRPL35	1	MRPL3	0	affinity chromatography technology	Huttlin EL (2017)	1
HSD17B10	1	RPL30	1	affinity chromatography technology	Malty RH (2017)	1
KLC2	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
APP	1	MAPRE1	0	two hybrid, pull down	Kajiwara Y (2010), Olah J (2011)	2
PRR14	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
OCEL1	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
SECISBP2	4	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CLU	1	TGFBR2	0	two hybrid, pull down, affinity chromatography technology	Reddy KB (1996), Reddy KB (1996), Reddy KB (1996)	3
CELF2	5	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PRKN	1	SNCA	0	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, genetic interference, genetic interference, affinity chromatography technology	Choi P (2001), Choi P (2001), Kawahara K (2008), Hampe C (2006), Nemes Z (2009), Oluwatosin-Chigbu Y (2003), Yang Y (2003), Norris KL (2015)	8
KCTD18	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
SYT6	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PAK6	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
ZNF365	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
STUB1	4	HSPD1	0	affinity chromatography technology, affinity chromatography technology	Kumar P (2007), Kumar P (2007)	2
EGFR	5	HSD17B10	1	affinity chromatography technology	Tong J (2014)	1
EGFR	5	HIST2H2AA3	0	affinity chromatography technology	Yao Z (2017)	1
PAK6	0	YWHAG	5	affinity chromatography technology	Huttlin EL (2017)	1
KAT5	1	RPL30	1	biochemical	Havugimana PC (2012)	1
WDR5	2	ING2	0	affinity chromatography technology	Xu Z (2012)	1
MCM7	5	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RPS16	2	RPS26	1	biochemical, biochemical, biochemical	Havugimana PC (2012), Kristensen AR (2012), Wan C (2015)	3
KCNN3	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
HGS	5	CCDC33	3	two hybrid	Rual JF (2005)	1
APP	1	HSD17B10	1	two hybrid, pull down, affinity chromatography technology	Yan SD (1997), Yan SD (1997), Yan SD (1997)	3
RPS11	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
APBB3	2	COPS5	0	affinity chromatography technology	Huttlin EL (2017)	1
RPS18	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
GAPDH	0	SET	8	pull down, affinity chromatography technology	Carujo S (2006), Carujo S (2006)	2
RBM42	0	SART1	3	affinity chromatography technology	Huttlin EL (2017)	1
CLSTN1	0	APP	1	affinity chromatography technology, affinity chromatography technology	Araki Y (2004), Araki Y (2003)	2
HIST1H2BM	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PLEKHG2	5	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
COPS5	0	CFAP58	1	affinity chromatography technology	Bennett EJ (2010)	1
NOP16	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
ZC3H3	4	NOP16	2	affinity chromatography technology	Huttlin EL (2015)	1
ZC3H3	4	GNL2	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
NOTCH1	25	SART1	3	affinity chromatography technology	Yatim A (2012)	1
ZNF622	0	C1orf35	1	affinity chromatography technology	Li S (2014)	1
CUL3	17	C1orf35	1	affinity chromatography technology	Bennett EJ (2010)	1
DDX20	4	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
GABRA4	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PP2D1	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
GAPDH	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
DLGAP5	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
HSPD1	0	MTG1	2	affinity chromatography technology	Huttlin EL (2017)	1
RPL31	0	RPS10	0	biochemical, biochemical	Havugimana PC (2012), Wan C (2015)	2
COPS5	0	KCTD18	0	affinity chromatography technology	Bennett EJ (2010)	1
RPL30	1	RPS18	1	biochemical	Wan C (2015)	1
COPS5	0	RPL31	0	affinity chromatography technology	Bennett EJ (2010)	1
PHF7	5	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PPAN	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PRKN	1	EGFR	5	affinity chromatography technology, affinity chromatography technology	Lin DC (2015), Lin DC (2015)	2
COPS5	0	MYBBP1A	8	affinity chromatography technology	Bennett EJ (2010)	1
MRPL49	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PRKN	1	SART1	3	affinity chromatography technology	Zanon A (2013)	1
THAP4	7	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PRKN	1	CRYAB	0	affinity chromatography technology	Gong Y (2014)	1
CUL3	17	ATP5C1	0	affinity chromatography technology	Bennett EJ (2010)	1
CDC20	1	CCDC59	1	affinity chromatography technology	Ewing RM (2007)	1
RPL36	0	RPS18	1	biochemical	Wan C (2015)	1
NOTCH1	25	CUL3	17	affinity chromatography technology, affinity chromatography technology	Ren K (2014), Ren K (2014)	2
MRPL35	1	MRPS18A	1	affinity chromatography technology	Huttlin EL (2017)	1
PLK1	0	CLU	1	affinity chromatography technology	Huttlin EL (2015)	1
NUAK2	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
COPS5	0	PLK1	0	affinity chromatography technology	Bennett EJ (2010)	1
GAPDH	0	YWHAG	5	biochemical	Kristensen AR (2012)	1
APP	1	YWHAG	5	two hybrid, affinity chromatography technology, unspecified method	Sumioka A (2005), Sumioka A (2005), Sumioka A (2005)	3
ANKS6	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
GSK3B	1	DDX20	4	affinity chromatography technology	Ewing RM (2007)	1
KIF3A	4	KIF3B	3	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Lolkema MP (2007), Hein MY (2015), Huttlin EL (2017), Boldt K (2016)	4
COPS5	0	MRPL49	0	affinity chromatography technology	Bennett EJ (2010)	1
CUL3	17	SART1	3	affinity chromatography technology	Bennett EJ (2010)	1
KLC1	5	CSNK1D	3	affinity chromatography technology	Hein MY (2015)	1
CSNK1D	3	SNCA	0	enzymatic study, imaging technique	Yin H (2006), Chen TC (2014)	2
APBB1	3	YWHAG	5	affinity chromatography technology	Sumioka A (2005)	1
ZNF22	0	RPL30	1	affinity chromatography technology	Huttlin EL (2017)	1
PTGS2	0	APP	1	affinity chromatography technology, affinity chromatography technology	Nagano S (2004), Nagano S (2004)	2
IER3	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
EIF2S2	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
APBB3	2	APP	1	pull down, protein complementation assay, affinity chromatography technology	Tanahashi H (1999), Kajiwara Y (2010), Huttlin EL (2017)	3
PDIA3	0	CAV1	0	affinity chromatography technology	Doroudi M (2012)	1
PHYHD1	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
SLC41A3	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
HK1	5	CAV1	0	affinity chromatography technology	Huttlin EL (2017)	1
MRPL3	0	RPS18	1	biochemical	Havugimana PC (2012)	1
SYNCRIP	6	MAPT	1	affinity chromatography technology	Hein MY (2015)	1
GIMAP4	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PRKN	1	PLK1	0	affinity chromatography technology, affinity chromatography technology, enzymatic study	Lee SB (2015), Lee SB (2015), Lee SB (2015)	3
CUL3	17	KAT5	1	affinity chromatography technology	Bhoumik A (2008)	1
C1orf131	2	DDX18	2	affinity chromatography technology	Blomen VA (2015)	1
EGFR	5	PRR14	3	affinity chromatography technology	Yao Z (2017)	1
RPL31	0	RPL36	0	biochemical	Wan C (2015)	1
RPS10	0	RPS16	2	biochemical, biochemical, biochemical	Havugimana PC (2012), Kristensen AR (2012), Wan C (2015)	3
ICK	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
WDR5	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
MAPRE1	0	COPS5	0	pull down	Peth A (2007)	1
ZC3HAV1	4	NSD2	9	affinity chromatography technology	Huttlin EL (2017)	1
YWHAG	5	NOLC1	2	affinity chromatography technology	Jin J (2004)	1
ZNF22	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
WDR5	2	MYBBP1A	8	affinity chromatography technology	Gan Q (2011)	1
RPL3L	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CSNK1E	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
UBQLN1	1	PSEN1	11	two hybrid, pull down, fluorescent resonance energy transfe, pull down	Mah AL (2000), Mah AL (2000), Thomas AV (2006), Ford DL (2006)	4
PCBD2	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
AURKA	1	USP2	0	affinity chromatography technology, pull down, pull down, affinity chromatography technology, enzymatic study	Shi Y (2011), Shi Y (2011), Shi Y (2011), Shi Y (2011), Shi Y (2011)	5
HAUS6	5	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CCDC28B	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
HMCES	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
GTDC1	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
HK1	5	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
BBX	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CAV1	0	NOS3	7	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Garcia-Cardena G (1996), Garcia-Cardena G (1996), Brouet A (2001), Ji Y (2007), Linton EA (2003), Linton EA (2003)	6
ZNF22	0	MRPS18A	1	affinity chromatography technology	Huttlin EL (2015)	1
PPFIBP2	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
SET	8	APP	1	unspecified method, affinity chromatography technology	Madeira A (2005), Briand S (2011)	2
CUL3	17	MYBBP1A	8	affinity chromatography technology	Bennett EJ (2010)	1
TAB2	5	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
EGFR	5	HGS	5	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Umebayashi K (2008), Morino C (2004), Meijer IM (2013), Sun Y (2013), Ali N (2013), Tan X (2015)	6
RPS10	0	RPL36	0	biochemical	Wan C (2015)	1
MAPRE1	0	KAT5	1	pull down	Xia P (2012)	1
ZNF740	6	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
EGFR	5	CAV1	0	affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, two hybrid, protein complementation assay, affinity chromatography technology, pull down, biochemical	Couet J (1997), Couet J (1997), Khan EM (2006), Feldman R (2009), Hua H (2003), Wu SL (2006), Wu SL (2006), Kotlyar M (2015), Petschnigg J (2014), Park WY (2000), Abulrob A (2004), Abulrob A (2004)	12
SRSF8	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CUL3	17	RPL31	0	affinity chromatography technology	Bennett EJ (2010)	1
CDKL3	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
THAP3	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
C6orf201	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
YWHAG	5	KLC1	5	affinity chromatography technology	Ewing RM (2007)	1
EGFR	5	MTG1	2	affinity chromatography technology	Yao Z (2017)	1
NSD2	9	DDX20	4	affinity chromatography technology	Mirabella F (2014)	1
COPS5	0	NOP16	2	affinity chromatography technology	Bennett EJ (2010)	1
RPS18	1	MRPL24	0	biochemical	Wan C (2015)	1
DEDD	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
HDAC4	10	SENP1	0	imaging technique	Maciejewska-Rodrigues H (2010)	1
COPS5	0	ABCF1	5	affinity chromatography technology	Bennett EJ (2010)	1
RPL30	1	IMP4	0	affinity chromatography technology	Huttlin EL (2017)	1
KLC4	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RPL30	1	ZNF574	3	affinity chromatography technology	Huttlin EL (2017)	1
MRPL3	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CUL3	17	SF3B2	7	affinity chromatography technology	Bennett EJ (2010)	1
CDC20	1	AURKA	1	affinity chromatography technology, affinity chromatography technology	Farruggio DC (1999), Katayama H (2012)	2
DYRK2	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
AIFM3	6	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PRKN	1	CDC20	1	affinity chromatography technology, affinity chromatography technology	Lee SB (2015), Lee SB (2015)	2
CCDC59	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
BLMH	0	APP	1	pull down, biochemical	Lefterov IM (2000), Lefterov IM (2000)	2
SERPIND1	5	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
EGFR	5	CTNND1	4	pull down, affinity chromatography technology, two hybrid, protein complementation assay, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Hazan RB (1998), Tong J (2014), Kotlyar M (2015), Petschnigg J (2014), Petschnigg J (2014), Li J (2013), Shrestha H (2016)	7
ZC3HAV1	4	NOP16	2	affinity chromatography technology	Huttlin EL (2017)	1
ZCCHC17	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
AURKA	1	KIF2C	1	enzymatic study	Zhang X (2008)	1
DDX20	4	SNRNP70	2	affinity chromatography technology	Huttlin EL (2017)	1
CUL3	17	RPS10	0	affinity chromatography technology	Bennett EJ (2010)	1
MAPT	1	STUB1	4	affinity chromatography technology, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, enzymatic study, affinity chromatography technology, biochemical, enzymatic study, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, pull down, unspecified method	Dickey CA (2008), Hatakeyama S (2004), Hatakeyama S (2004), Hatakeyama S (2004), Petrucelli L (2004), Dolan PJ (2010), Dolan PJ (2010), Shimura H (2004), Shimura H (2004), Shimura H (2004), Dickey CA (2007), Sakagami Y (2013), Ozdemir AY (2013), Grelle G (2006), Grelle G (2006)	15
APP	1	TM2D1	0	two hybrid, affinity chromatography technology	Kajkowski EM (2001), Kajkowski EM (2001)	2
EGFR	5	MAPT	1	two hybrid, protein complementation assay	Kotlyar M (2015), Petschnigg J (2014)	2
SUSD3	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RPS18	1	RPS11	0	biochemical	Wan C (2015)	1
SULF1	3	APP	1	pull down, affinity chromatography technology	Olah J (2011), Huttlin EL (2017)	2
DDX10	4	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
LNX1	7	NUMB	1	enzymatic study, affinity chromatography technology, enzymatic study, pull down, affinity chromatography technology, affinity chromatography technology	Nie J (2002), Nie J (2002), Nie J (2004), Nie J (2004), Chen J (2005), Lenihan JA (2017)	6
KAT5	1	NOTCH1	25	affinity chromatography technology, genetic interference, affinity chromatography technology	Kim MY (2007), Kim SY (2007), Kim SY (2007)	3
RPS19	1	RPS26	1	biochemical, biochemical, biochemical	Havugimana PC (2012), Kristensen AR (2012), Wan C (2015)	3
APP	1	APBA3	2	affinity chromatography technology, pull down, two hybrid, pull down, affinity chromatography technology	Biederer T (2002), Biederer T (2002), Tanahashi H (1999), Tanahashi H (1999), Huttlin EL (2017)	5
KIF2C	1	WDR5	2	biochemical	Wan C (2015)	1
APP	1	QRICH1	8	two hybrid, affinity chromatography technology, affinity chromatography technology	Lakshmana MK (2005), Lakshmana MK (2005), Lakshmana MK (2005)	3
NOL7	0	UTP4	1	affinity chromatography technology	Huttlin EL (2017)	1
PRKN	1	GAPDH	0	biochemical, affinity chromatography technology	Schlehe JS (2008), Zanon A (2013)	2
PRKN	1	RPS16	2	affinity chromatography technology	Zanon A (2013)	1
PLK1	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
ZFC3H1	6	APP	1	pull down, affinity chromatography technology	Olah J (2011), Hein MY (2015)	2
GPAM	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
MAPK8IP1	7	MAPK8	3	affinity chromatography technology, affinity chromatography technology, unspecified method, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology	Whitmarsh AJ (1998), Cai Y (2002), Ho DT (2006), Song JJ (2005), Blanco S (2008), Blanco S (2008), Nishitani Y (2006), Huttlin EL (2017)	8
PSEN1	11	GAPDH	0	two hybrid	Soler-Lopez M (2011)	1
DHX58	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CLSTN1	0	PSEN1	11	affinity chromatography technology	Araki Y (2004)	1
CUL3	17	WDR5	2	affinity chromatography technology	Bennett EJ (2010)	1
YWHAG	5	KLC2	2	affinity chromatography technology	Ewing RM (2007)	1
ZC3HAV1	4	GNL2	1	affinity chromatography technology	Huttlin EL (2017)	1
CALR	1	PDIA3	0	affinity chromatography technology, biochemical, pull down, pull down, pull down, biochemical, affinity chromatography technology, affinity chromatography technology	Oliver JD (1999), Oliver JD (1999), Oliver JD (1999), Oliver JD (1999), Leach MR (2002), Wan C (2015), Tan P (2002), Tan P (2002)	8
CUL3	17	HSPD1	0	affinity chromatography technology, affinity chromatography technology	Oshikawa K (2003), Bennett EJ (2010)	2
EGFR	5	STUB1	4	protein complementation assay, affinity chromatography technology, affinity chromatography technology, two hybrid, protein complementation assay, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Deribe YL (2009), Wang T (2014), Wang T (2014), Kotlyar M (2015), Petschnigg J (2014), Petschnigg J (2014), Chung C (2016), Chung C (2016)	8
DAB1	1	TCEANC	0	two hybrid	Rolland T (2014)	1
AURKA	1	RPS10	0	affinity chromatography technology	Fogeron ML (2013)	1
SERAC1	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
HSD17B10	1	CTNNA1	7	affinity chromatography technology	Malty RH (2017)	1
LRRC8D	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
SURF2	0	DDX18	2	affinity chromatography technology	Huttlin EL (2015)	1
PSRC1	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
APP	1	CLU	1	pull down, pull down, fluorescent resonance energy transfe, affinity chromatography technology	Hammad SM (1997), Ghiso J (1993), Chen P (2013), Chen P (2013)	4
PDIA3	0	LAMC1	5	affinity chromatography technology	Jessop CE (2007)	1
RPL3L	2	RPS26	1	biochemical	Wan C (2015)	1
PLK1	0	DNM2	2	affinity chromatography technology	Hein MY (2015)	1
CDKL3	1	SNRNP70	2	two hybrid	Wang J (2011)	1
ZNF574	3	TRIM41	6	affinity chromatography technology	Huttlin EL (2017)	1
SNCA	0	CTNND1	4	pull down	Schnack C (2008)	1
KLC2	2	PATL1	4	biochemical	Havugimana PC (2012)	1
DYRK2	1	KIF3B	3	affinity chromatography technology	Boldt K (2016)	1
CAV1	0	SNCA	0	pull down	Madeira A (2011)	1
CUL3	17	RPS18	1	affinity chromatography technology	Bennett EJ (2010)	1
NOTCH1	25	APP	1	genetic interference, affinity chromatography technology	Kim SY (2007), Kim SY (2007)	2
PHF8	6	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
MYBBP1A	8	NOP16	2	biochemical	Havugimana PC (2012)	1
HIST2H2AB	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
AURKA	1	HSPD1	0	affinity chromatography technology	Fogeron ML (2013)	1
EGFR	5	OPA1	4	affinity chromatography technology	Tong J (2014)	1
ZNF2	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RPL30	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
MAPK7	1	GAPDH	0	affinity chromatography technology, affinity chromatography technology	Erazo T (2013), Varjosalo M (2013)	2
EGFR	5	MAPK8	3	two hybrid, protein complementation assay, affinity chromatography technology	Kotlyar M (2015), Petschnigg J (2014), Petschnigg J (2014)	3
COPS5	0	RPS11	0	affinity chromatography technology	Bennett EJ (2010)	1
APP	1	CAV1	0	biochemical, unspecified method	Ikezu T (1998), Ikezu T (1998)	2
CUL3	17	GTPBP1	4	affinity chromatography technology	Bennett EJ (2010)	1
SHC1	0	KDR	4	affinity chromatography technology, affinity chromatography technology	Zanetti A (2002), DAngelo G (1999)	2
PHF8	6	CDC20	1	affinity chromatography technology, affinity chromatography technology	Lim HJ (2013), Lim HJ (2013)	2
CSNK1E	0	CSNK1D	3	affinity chromatography technology, affinity chromatography technology	Varjosalo M (2013), Huttlin EL (2017)	2
EGFR	5	CTNNA1	7	imaging technique, affinity chromatography technology	Chen TC (2014), Li J (2013)	2
KIF3B	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
MRPL35	1	MRPL34	2	affinity chromatography technology	Huttlin EL (2017)	1
DLGAP5	2	AURKA	1	biochemical	Havugimana PC (2012)	1
CUL3	17	CTNND1	4	affinity chromatography technology	Bennett EJ (2010)	1
COPS5	0	RPS18	1	affinity chromatography technology	Bennett EJ (2010)	1
HP1BP3	2	RPL30	1	affinity chromatography technology	Huttlin EL (2017)	1
HMGB4	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
APBB1	3	SF3B2	7	pull down	Ingham RJ (2005)	1
ZC3HAV1	4	DDX10	4	affinity chromatography technology	Huttlin EL (2017)	1
COPS5	0	RPS10	0	affinity chromatography technology	Bennett EJ (2010)	1
ZC2HC1A	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RNF32	0	IFIT3	1	two hybrid	Soler-Lopez M (2011)	1
C8orf33	3	NOL7	0	two hybrid	Vinayagam A (2011)	1
ZC3HAV1	4	ZNF574	3	affinity chromatography technology	Huttlin EL (2017)	1
AURKA	1	RPS16	2	affinity chromatography technology	Fogeron ML (2013)	1
IMP4	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
AURKA	1	MAPRE1	0	affinity chromatography technology	Ban R (2009)	1
TMEM30A	1	APP	1	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
NOTCH1	25	KIF3A	4	affinity chromatography technology	Yatim A (2012)	1
AGO4	5	RPS26	1	affinity chromatography technology	Weinmann L (2009)	1
EGFR	5	CALR	1	affinity chromatography technology	Tong J (2014)	1
OLFML2A	4	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RITA1	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
SPATA4	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
AURKA	1	MRPL24	0	affinity chromatography technology	Fogeron ML (2013)	1
ATAT1	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
GSN	3	APP	1	pull down, affinity chromatography technology	Chauhan VP (1999), Chauhan VP (1999)	2
GSK3B	1	SNCA	0	pull down	Kawakami F (2011)	1
ZNF2	1	IMP4	0	affinity chromatography technology	Huttlin EL (2017)	1
EGFR	5	PTPN12	2	protein complementation assay, two hybrid, protein complementation assay, affinity chromatography technology, two hybrid	Deribe YL (2009), Kotlyar M (2015), Petschnigg J (2014), Petschnigg J (2014), Yao Z (2017)	5
NTMT1	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PTPN12	2	NUSAP1	0	biochemical	Kristensen AR (2012)	1
CCDC60	1	RBM42	0	affinity chromatography technology	Huttlin EL (2017)	1
CTNND1	4	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
NOTCH1	25	NUMB	1	pull down, pull down	Zhong W (1996), Pettersson S (2012)	2
NSD2	9	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
APBB2	2	APBB1	3	affinity chromatography technology, affinity chromatography technology	Huttlin EL (2015), Huttlin EL (2017)	2
APBB3	2	EGFR	5	unspecified method	Jones RB (2006)	1
SNCA	0	ELK1	2	affinity chromatography technology, affinity chromatography technology	Iwata A (2001), Iwata A (2001)	2
CARF	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PATL1	4	SART1	3	biochemical	Havugimana PC (2012)	1
EGFR	5	NUMB	1	unspecified method	Jones RB (2006)	1
UBQLN1	1	GAPDH	0	biochemical	Kristensen AR (2012)	1
RPS26	1	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
RPS18	1	RPL3L	2	biochemical	Wan C (2015)	1
SYNCRIP	6	BLMH	0	affinity chromatography technology	Hein MY (2015)	1
AVPI1	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
FANCM	5	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
PTPN12	2	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
AURKA	1	PLK1	0	affinity chromatography technology, biochemical	Katayama H (2008), Havugimana PC (2012)	2
COPS5	0	GTPBP1	4	affinity chromatography technology	Bennett EJ (2010)	1
DDX18	2	DDX55	1	biochemical	Wan C (2015)	1
CRYAB	0	APP	1	pull down, pull down, unspecified method, x-ray crystallography, pull down	Raman B (2005), Narayanan S (2006), Shammas SL (2011), Mainz A (2015), Narayan P (2012)	5
RPL30	1	RPL31	0	biochemical, biochemical	Havugimana PC (2012), Wan C (2015)	2
AURKA	1	CTNND1	4	affinity chromatography technology	Fogeron ML (2013)	1
OSBPL11	0	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
NOLC1	2	NOP16	2	biochemical	Havugimana PC (2012)	1
GTF2E2	2	DNM2	2	affinity chromatography technology	Jeronimo C (2007)	1
ADARB1	5	NOP16	2	affinity chromatography technology	Li S (2014)	1
COPS5	0	APP	1	pull down, affinity chromatography technology	Olah J (2011), Wang H (2013)	2
COPS5	0	WDR5	2	affinity chromatography technology	Bennett EJ (2010)	1
APBB1	3	SET	8	affinity chromatography technology, affinity chromatography technology, affinity chromatography technology	Telese F (2005), Telese F (2005), Telese F (2005)	3
MYBBP1A	8	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
CTNNA1	7	CTNND1	4	affinity chromatography technology	Daniel JM (1995)	1
CUL3	17	SYNCRIP	6	affinity chromatography technology	Bennett EJ (2010)	1
ADARB1	5	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
MAPK8	3	BLMH	0	affinity chromatography technology	Hein MY (2015)	1
TRAF3IP1	3	TAB2	5	two hybrid	Camargo LM (2007)	1
CUL3	17	SNRNP70	2	affinity chromatography technology	Bennett EJ (2010)	1
ZNF2	1	DDX54	1	affinity chromatography technology	Huttlin EL (2017)	1
KCNN3	1	DNM2	2	affinity chromatography technology	Gao Y (2012)	1
OTX2	3	APP	1	pull down, pull down	Olah J (2011), Virok DP (2011)	2
APP	1	SYVN1	2	affinity chromatography technology, enzymatic study	Kaneko M (2010), Kaneko M (2010)	2
COPS5	0	RPL30	1	affinity chromatography technology	Bennett EJ (2010)	1