PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000334371	[[152748847, 152749445]]	[[152748847, 152749204]]
NM_178354	[[152748847, 152749445]]	[[152748847, 152749204]]

Promoter

Chrom	Start	End	Description
chr1	152748895	152748921	CAGE_peak_1_at_LCE1F_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I152743	152743005	152744660	0.72	[{'connected_gene': 'LCEP1', 'score': 550.77}, {'connected_gene': 'S100A16', 'score': 10.72}, {'connected_gene': 'LCE1F', 'score': 10.65}, {'connected_gene': 'C1orf68', 'score': 10.24}, {'connected_gene': 'S100A3', 'score': 9.76}, {'connected_gene': 'LCEP2', 'score': 0.44}]
chr1	GH01I152745	152745565	152745574	0.68	[{'connected_gene': 'LCEP1', 'score': 550.77}, {'connected_gene': 'LCE1F', 'score': 10.65}, {'connected_gene': 'C1orf68', 'score': 10.21}, {'connected_gene': 'KPRP', 'score': 0.39}]
chr1	GH01I152768	152768953	152769810	0.43	[{'connected_gene': 'LCE1F', 'score': 0.44}, {'connected_gene': 'KPRP', 'score': 0.39}]
chr1	GH01I152776	152776396	152776455	0.5	[{'connected_gene': 'LCE1F', 'score': 550.77}, {'connected_gene': 'LCE1E', 'score': 0.44}]