PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr5	50679228	50679288	CAGE_peak_1_at_ISL1_5end
chr5	50681985	50682031	CAGE_peak_2_at_ISL1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr5	GH05I050962	50962892	50964528	1.24	[{'connected_gene': 'ISL1', 'score': 10.05}, {'connected_gene': 'PARP8', 'score': 5.48}, {'connected_gene': 'EMB', 'score': 3.88}, {'connected_gene': 'ENSG00000250360', 'score': 0.77}, {'connected_gene': 'ENSG00000251601', 'score': 0.31}, {'connected_gene': 'GC05M050956', 'score': 0.22}]
chr5	GH05I051380	51380978	51390638	2.18	[{'connected_gene': 'ISL1', 'score': 550.77}, {'connected_gene': 'EMB', 'score': 3.82}, {'connected_gene': 'LOC642366', 'score': 0.77}, {'connected_gene': 'GC05M051356', 'score': 0.77}, {'connected_gene': 'GC05P051405', 'score': 0.37}]
chr5	GH05I051411	51411733	51413370	0.43	[{'connected_gene': 'ISL1', 'score': 11.67}, {'connected_gene': 'HMGB1P47', 'score': 0.77}, {'connected_gene': 'GC05P051405', 'score': 0.44}, {'connected_gene': 'GC05M051429', 'score': 0.37}]
chr5	GH05I051409	51409440	51411328	0.2	[{'connected_gene': 'HMGB1P47', 'score': 550.77}, {'connected_gene': 'ISL1', 'score': 11.94}, {'connected_gene': 'GC05P051405', 'score': 0.44}, {'connected_gene': 'GC05M051429', 'score': 0.37}]
chr5	GH05I050965	50965484	50968114	1.04	[{'connected_gene': 'ENSG00000250360', 'score': 550.77}, {'connected_gene': 'ISL1', 'score': 23.81}, {'connected_gene': 'PARP8', 'score': 5.9}, {'connected_gene': 'ENSG00000251601', 'score': 0.29}, {'connected_gene': 'GC05M050956', 'score': 0.23}]