PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000309765	[[44283377, 44283891], [44284344, 44286763], [44296459, 44296521], [44297642, 44297770], [44303910, 44303975], [44308488, 44308628], [44310707, 44310793], [44312176, 44312302], [44323459, 44323523], [44328880, 44329032], [44329238, 44329331], [44332262, 44332378], [44345506, 44345573], [44346638, 44346813], [44347817, 44347918], [44351316, 44351482], [44362518, 44362683], [44364583, 44364787], [44369741, 44369925], [44373283, 44373590]]	[[44283545, 44283891], [44284344, 44286763], [44296459, 44296521], [44297642, 44297770], [44303910, 44303975], [44308488, 44308628], [44310707, 44310793], [44312176, 44312302], [44323459, 44323523], [44328880, 44329032], [44329238, 44329331], [44332262, 44332378], [44345506, 44345573], [44346638, 44346813], [44347817, 44347918], [44351316, 44351482], [44362518, 44362683], [44364583, 44364787], [44369741, 44369925], [44373283, 44373503]]
NM_001145030	[[44283377, 44283891], [44284344, 44286763], [44296459, 44296521], [44297642, 44297770], [44303910, 44303975], [44308488, 44308628], [44310707, 44310793], [44312176, 44312302], [44323459, 44323523], [44328880, 44329032], [44329238, 44329331], [44332262, 44332378], [44345506, 44345573], [44346638, 44346813], [44347817, 44347918], [44351316, 44351482], [44362518, 44362683], [44364583, 44364787], [44369741, 44369925], [44373283, 44373590]]	[[44283545, 44283891], [44284344, 44286763], [44296459, 44296521], [44297642, 44297770], [44303910, 44303975], [44308488, 44308628], [44310707, 44310793], [44312176, 44312302], [44323459, 44323523], [44328880, 44329032], [44329238, 44329331], [44332262, 44332378], [44345506, 44345573], [44346638, 44346813], [44347817, 44347918], [44351316, 44351482], [44362518, 44362683], [44364583, 44364787], [44369741, 44369925], [44373283, 44373503]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I044241	44241856	44241915	0.61	[{'connected_gene': 'TOPAZ1', 'score': 550.77}, {'connected_gene': 'PIR53341', 'score': 0.13}]
chr3	GH03I044233	44233079	44238725	1.17	[{'connected_gene': 'ZNF660', 'score': 39.63}, {'connected_gene': 'ZNF502', 'score': 20.16}, {'connected_gene': 'ZNF197', 'score': 19.44}, {'connected_gene': 'ZKSCAN7', 'score': 12.54}, {'connected_gene': 'ZNF445', 'score': 11.38}, {'connected_gene': 'ZNF852', 'score': 10.59}, {'connected_gene': 'RNU6-367P', 'score': 9.97}, {'connected_gene': 'ZNF35', 'score': 9.79}, {'connected_gene': 'SNRK-AS1', 'score': 9.72}, {'connected_gene': 'MIR138-1', 'score': 9.49}, {'connected_gene': 'TCAIM', 'score': 7.76}, {'connected_gene': 'ENSG00000271941', 'score': 5.94}, {'connected_gene': 'TOPAZ1', 'score': 0.44}, {'connected_gene': 'PIR53341', 'score': 0.13}]
chr3	GH03I044222	44222159	44224576	0.6	[{'connected_gene': 'ZNF660', 'score': 31.71}, {'connected_gene': 'RNU6-367P', 'score': 10.5}, {'connected_gene': 'ZNF197', 'score': 8.06}, {'connected_gene': 'ABHD5', 'score': 6.2}, {'connected_gene': 'TOPAZ1', 'score': 0.37}, {'connected_gene': 'PIR53341', 'score': 0.15}]
chr3	GH03I044196	44196666	44201021	1.13	[{'connected_gene': 'ZNF660', 'score': 25.21}, {'connected_gene': 'ZNF197', 'score': 7.8}, {'connected_gene': 'KIAA1143', 'score': 7.47}, {'connected_gene': 'ENSG00000271941', 'score': 5.36}, {'connected_gene': 'TOPAZ1', 'score': 0.26}, {'connected_gene': 'PIR53341', 'score': 0.18}]
chr3	GH03I044202	44202925	44208648	0.69	[{'connected_gene': 'ZNF660', 'score': 30.87}, {'connected_gene': 'ZNF197', 'score': 7.58}, {'connected_gene': 'ENSG00000271941', 'score': 6.34}, {'connected_gene': 'TCAIM', 'score': 4.17}, {'connected_gene': 'TOPAZ1', 'score': 0.28}, {'connected_gene': 'PIR53341', 'score': 0.17}]
chr3	GH03I044232	44232509	44232658	0.2	[{'connected_gene': 'RNU6-367P', 'score': 9.97}, {'connected_gene': 'MIR138-1', 'score': 9.49}, {'connected_gene': 'TOPAZ1', 'score': 0.44}, {'connected_gene': 'PIR53341', 'score': 0.14}]
chr3	GH03I044099	44099357	44101275	0.2	[{'connected_gene': 'RNU6-367P', 'score': 11.38}, {'connected_gene': 'TOPAZ1', 'score': 9.23}, {'connected_gene': 'ZNF502', 'score': 4.97}, {'connected_gene': 'KIAA1143', 'score': 4.09}, {'connected_gene': 'GC03P044115', 'score': 0.39}, {'connected_gene': 'GC03M044082', 'score': 0.37}]
chr3	GH03I044201	44201379	44202594	0.4	[{'connected_gene': 'ZNF197', 'score': 7.4}, {'connected_gene': 'ZNF660', 'score': 7.0}, {'connected_gene': 'TCAIM', 'score': 6.78}, {'connected_gene': 'TOPAZ1', 'score': 0.28}, {'connected_gene': 'PIR53341', 'score': 0.18}]
chr3	GH03I043869	43869281	43874312	1.28	[{'connected_gene': 'ENSG00000261786', 'score': 21.02}, {'connected_gene': 'ZNF852', 'score': 11.86}, {'connected_gene': 'ZNF662', 'score': 11.35}, {'connected_gene': 'ZNF502', 'score': 10.89}, {'connected_gene': 'RNU6-367P', 'score': 10.69}, {'connected_gene': 'SNRK', 'score': 10.31}, {'connected_gene': 'MIR138-1', 'score': 10.29}, {'connected_gene': 'TOPAZ1', 'score': 9.7}, {'connected_gene': 'ANO10', 'score': 1.47}, {'connected_gene': 'GC03P043926', 'score': 0.23}, {'connected_gene': 'ENSG00000235886', 'score': 0.16}, {'connected_gene': 'GC03M043165', 'score': 0.15}]