PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr13	98605781	98605792	CAGE_peak_34_at_IPO5_5end
chr13	98605902	98605944	CAGE_peak_3_at_IPO5_5end
chr13	98612495	98612508	CAGE_peak_26_at_IPO5_5end
chr13	98628137	98628205	CAGE_peak_2_at_IPO5_5end
chr13	98628911	98628950	CAGE_peak_1_at_IPO5_5end
chr13	98670769	98670780	CAGE_peak_5_at_IPO5_5end
chr13	98670838	98670857	CAGE_peak_7_at_IPO5_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I097575	97575275	97575443	0.53	[{'connected_gene': 'IPO5', 'score': 24.93}, {'connected_gene': 'PIR51420', 'score': 0.39}, {'connected_gene': 'GC13P097561', 'score': 0.39}, {'connected_gene': 'LOC105370324', 'score': 0.12}]
chr13	GH13I097975	97975081	97979215	1.97	[{'connected_gene': 'IPO5', 'score': 550.34}, {'connected_gene': 'FTLP8', 'score': 0.39}]
chr13	GH13I097953	97953317	97954213	0.93	[{'connected_gene': 'IPO5', 'score': 550.77}, {'connected_gene': 'ENSG00000270725', 'score': 0.39}, {'connected_gene': 'FTLP8', 'score': 0.29}]
chr13	GH13I097946	97946880	97948195	0.52	[{'connected_gene': 'IPO5', 'score': 0.44}, {'connected_gene': 'ENSG00000270725', 'score': 0.44}]
chr13	GH13I098004	98004207	98004376	0.43	[{'connected_gene': 'FTLP8', 'score': 0.37}, {'connected_gene': 'IPO5', 'score': 0.23}, {'connected_gene': 'FARP1', 'score': 0.12}]
chr13	GH13I098014	98014847	98015016	0.46	[{'connected_gene': 'FTLP8', 'score': 0.31}, {'connected_gene': 'IPO5', 'score': 0.21}, {'connected_gene': 'FARP1', 'score': 0.13}]
chr13	GH13I098021	98021618	98023013	0.2	[{'connected_gene': 'FTLP8', 'score': 0.28}, {'connected_gene': 'IPO5', 'score': 0.2}, {'connected_gene': 'FARP1', 'score': 0.13}]
chr13	GH13I097986	97986947	97987096	0.38	[{'connected_gene': 'FTLP8', 'score': 550.77}, {'connected_gene': 'IPO5', 'score': 0.29}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000482642	[[98605911, 98606452], [98621976, 98622159]]	None
ENST00000460070	[[98605911, 98605970], [98621976, 98622084], [98628946, 98629040], [98634756, 98634837], [98637674, 98637876]]	[[98622034, 98622084], [98628946, 98629040], [98634756, 98634837], [98637674, 98637876]]
ENST00000481455	[[98605928, 98605970], [98606356, 98606452], [98621976, 98622084], [98628946, 98629040], [98634756, 98634837], [98637674, 98637808]]	[[98622034, 98622084], [98628946, 98629040], [98634756, 98634837], [98637674, 98637808]]
ENST00000261574	[[98605928, 98605970], [98606372, 98606452], [98621976, 98622084], [98628946, 98629040], [98634756, 98634837], [98637674, 98637867], [98641315, 98641418], [98642379, 98642476], [98642686, 98642791], [98645145, 98645268], [98645358, 98645479], [98649784, 98649872], [98652792, 98652899], [98654720, 98654845], [98654937, 98655027], [98655117, 98655291], [98658383, 98658602], [98660312, 98660396], [98662134, 98662267], [98662356, 98662478], [98664499, 98664596], [98666295, 98666468], [98667783, 98667895], [98667979, 98668035], [98668982, 98669105], [98670738, 98670958], [98671834, 98672063], [98673245, 98673387], [98673989, 98676551]]	[[98622034, 98622084], [98628946, 98629040], [98634756, 98634837], [98637674, 98637867], [98641315, 98641418], [98642379, 98642476], [98642686, 98642791], [98645145, 98645268], [98645358, 98645479], [98649784, 98649872], [98652792, 98652899], [98654720, 98654845], [98654937, 98655027], [98655117, 98655291], [98658383, 98658602], [98660312, 98660396], [98662134, 98662267], [98662356, 98662478], [98664499, 98664596], [98666295, 98666468], [98667783, 98667895], [98667979, 98668035], [98668982, 98669105], [98670738, 98670958], [98671834, 98672063], [98673245, 98673387], [98673989, 98674076]]
ENST00000493281	[[98605936, 98605970], [98606372, 98606452], [98612600, 98612657], [98615413, 98615536], [98621976, 98622084], [98628946, 98629040], [98634756, 98634804]]	[[98622034, 98622084], [98628946, 98629040], [98634756, 98634804]]
ENST00000490369	[[98605936, 98605970], [98606372, 98606452], [98621976, 98622084], [98628946, 98629040], [98633495, 98633654], [98634756, 98634823]]	[[98622034, 98622084], [98628946, 98629040], [98633495, 98633543]]
ENST00000463157	[[98605936, 98605970], [98606372, 98606452], [98612600, 98612657], [98621976, 98622084], [98628946, 98629040], [98634756, 98634837], [98637674, 98637713]]	[[98622034, 98622084], [98628946, 98629040], [98634756, 98634837], [98637674, 98637713]]
ENST00000471898	[[98605936, 98605970], [98606372, 98606452], [98621976, 98622084], [98628144, 98628251], [98628946, 98629040], [98634756, 98634837], [98637674, 98637726]]	[[98628950, 98629040], [98634756, 98634837], [98637674, 98637726]]
ENST00000489058	[[98605947, 98606181], [98606372, 98606452], [98621976, 98622084], [98628946, 98629046]]	[[98622034, 98622084], [98628946, 98629046]]
ENST00000481689	[[98605967, 98606181], [98621976, 98622084], [98628946, 98629040], [98634756, 98634837], [98637674, 98637745]]	[[98606149, 98606181], [98621976, 98622084], [98628946, 98629040], [98634756, 98634837], [98637674, 98637745]]
ENST00000480611	[[98606179, 98606257], [98606349, 98606452], [98621976, 98622084], [98628946, 98629040], [98634756, 98634837], [98637674, 98637801]]	[[98622034, 98622084], [98628946, 98629040], [98634756, 98634837], [98637674, 98637801]]
ENST00000485433	[[98606212, 98606452], [98621976, 98622084], [98628946, 98629040], [98634756, 98634838]]	[[98622034, 98622084], [98628946, 98629040], [98634756, 98634838]]
ENST00000496368	[[98612445, 98612512], [98615413, 98615536], [98621976, 98622084], [98628946, 98629040], [98634756, 98634837], [98637674, 98637743]]	[[98622034, 98622084], [98628946, 98629040], [98634756, 98634837], [98637674, 98637743]]
ENST00000421861	[[98612471, 98612657], [98621976, 98622084], [98628946, 98629040], [98634756, 98634837], [98637674, 98637769]]	[[98622034, 98622084], [98628946, 98629040], [98634756, 98634837], [98637674, 98637769]]
ENST00000357602	[[98612502, 98612657], [98621976, 98622084], [98628144, 98628251], [98628946, 98629040], [98634756, 98634837], [98637674, 98637867], [98641315, 98641418], [98642379, 98642476], [98642686, 98642791], [98645145, 98645268], [98645358, 98645479], [98649784, 98649872], [98652792, 98652899], [98654720, 98654845], [98654937, 98655027], [98655117, 98655291], [98658383, 98658602], [98660312, 98660396], [98662134, 98662267], [98662356, 98662478], [98664499, 98664596], [98666295, 98666468], [98667783, 98667895], [98667979, 98668035], [98668982, 98669105], [98670738, 98670958], [98671834, 98672063], [98673245, 98673387], [98673989, 98674743]]	[[98628950, 98629040], [98634756, 98634837], [98637674, 98637867], [98641315, 98641418], [98642379, 98642476], [98642686, 98642791], [98645145, 98645268], [98645358, 98645479], [98649784, 98649872], [98652792, 98652899], [98654720, 98654845], [98654937, 98655027], [98655117, 98655291], [98658383, 98658602], [98660312, 98660396], [98662134, 98662267], [98662356, 98662478], [98664499, 98664596], [98666295, 98666468], [98667783, 98667895], [98667979, 98668035], [98668982, 98669105], [98670738, 98670958], [98671834, 98672063], [98673245, 98673387], [98673989, 98674076]]
ENST00000475420	[[98627884, 98628251], [98628946, 98629040], [98634756, 98634837], [98637674, 98637867], [98641315, 98641418], [98642379, 98642424]]	[[98628950, 98629040], [98634756, 98634837], [98637674, 98637867], [98641315, 98641418], [98642379, 98642424]]
ENST00000480641	[[98628718, 98628756], [98628946, 98629040], [98634308, 98634397], [98634756, 98634837], [98637674, 98637867], [98641315, 98641363]]	[[98637683, 98637867], [98641315, 98641363]]
ENST00000490680	[[98628885, 98629040], [98634756, 98634837], [98637674, 98637867], [98641315, 98641418], [98642379, 98642476], [98642686, 98642791], [98645145, 98645268], [98645358, 98645479], [98649784, 98649872], [98652792, 98652899], [98654720, 98654845], [98654937, 98655027], [98655117, 98655291], [98658383, 98658602], [98660312, 98660396], [98662134, 98662267], [98662356, 98662478], [98664499, 98664596], [98666295, 98666468], [98667783, 98667895], [98667979, 98668035], [98668982, 98669105], [98670738, 98670958], [98671834, 98672063], [98673245, 98673387], [98673989, 98674136]]	[[98628950, 98629040], [98634756, 98634837], [98637674, 98637867], [98641315, 98641418], [98642379, 98642476], [98642686, 98642791], [98645145, 98645268], [98645358, 98645479], [98649784, 98649872], [98652792, 98652899], [98654720, 98654845], [98654937, 98655027], [98655117, 98655291], [98658383, 98658602], [98660312, 98660396], [98662134, 98662267], [98662356, 98662478], [98664499, 98664596], [98666295, 98666468], [98667783, 98667895], [98667979, 98668035], [98668982, 98669105], [98670738, 98670958], [98671834, 98672063], [98673245, 98673387], [98673989, 98674076]]
ENST00000497270	[[98628928, 98629040], [98634756, 98634837], [98637674, 98637867], [98640243, 98640355], [98641315, 98641353]]	[[98628950, 98629040], [98634756, 98634837], [98637674, 98637867], [98640243, 98640260]]
ENST00000539640	[[98628928, 98629040], [98634756, 98634837], [98637674, 98637774], [98642768, 98642791], [98645145, 98645268], [98645358, 98645479], [98649784, 98649872], [98652792, 98652899], [98654720, 98654845], [98654937, 98655027], [98655117, 98655291], [98658383, 98658602], [98660312, 98660396], [98662134, 98662267], [98662356, 98662478], [98664499, 98664596], [98666295, 98666468], [98667783, 98667895], [98667979, 98668035], [98668982, 98669105], [98670738, 98670958], [98671834, 98672063], [98673245, 98673387], [98673989, 98674131]]	[[98628950, 98629040], [98634756, 98634837], [98637674, 98637774], [98642768, 98642791], [98645145, 98645268], [98645358, 98645479], [98649784, 98649872], [98652792, 98652899], [98654720, 98654845], [98654937, 98655027], [98655117, 98655291], [98658383, 98658602], [98660312, 98660396], [98662134, 98662267], [98662356, 98662478], [98664499, 98664596], [98666295, 98666468], [98667783, 98667895], [98667979, 98668035], [98668982, 98669105], [98670738, 98670958], [98671834, 98672063], [98673245, 98673387], [98673989, 98674076]]
ENST00000403772	[[98628956, 98629040], [98637674, 98637867], [98641315, 98641418], [98642379, 98642476], [98642686, 98642756]]	[[98628956, 98629040], [98637674, 98637867], [98641315, 98641418], [98642379, 98642476], [98642686, 98642756]]
ENST00000469360	[[98629216, 98629311], [98634756, 98634837], [98637674, 98637867], [98641315, 98641418], [98642379, 98642476], [98642686, 98642791], [98645145, 98645268], [98645358, 98645479], [98649784, 98649872], [98652792, 98652899], [98654720, 98654845], [98654937, 98655027], [98655117, 98655291], [98658383, 98658602], [98660312, 98660396], [98662134, 98662267], [98662356, 98662478], [98664499, 98664596], [98666295, 98666468], [98667783, 98667895], [98667979, 98668035], [98668982, 98669105], [98670738, 98670958], [98671834, 98672063], [98673245, 98673387], [98673989, 98674282]]	[[98629216, 98629311], [98634756, 98634837], [98637674, 98637867], [98641315, 98641418], [98642379, 98642476], [98642686, 98642791], [98645145, 98645268], [98645358, 98645479], [98649784, 98649872], [98652792, 98652899], [98654720, 98654845], [98654937, 98655027], [98655117, 98655291], [98658383, 98658602], [98660312, 98660396], [98662134, 98662267], [98662356, 98662478], [98664499, 98664596], [98666295, 98666468], [98667783, 98667895], [98667979, 98668035], [98668982, 98669105], [98670738, 98670958], [98671834, 98672063], [98673245, 98673387], [98673989, 98674076]]
ENST00000473582	[[98632123, 98632197], [98634756, 98634837], [98637674, 98637867], [98641315, 98641418], [98642379, 98642464]]	[[98632164, 98632197], [98634756, 98634837], [98637674, 98637867], [98641315, 98641418], [98642379, 98642464]]
ENST00000470493	[[98645403, 98645479], [98649784, 98649872], [98652792, 98653176]]	None
ENST00000491555	[[98653899, 98654845], [98654937, 98655027], [98655117, 98655291], [98658383, 98658602], [98660312, 98660396], [98662134, 98662267], [98662356, 98662478], [98664499, 98664596], [98666295, 98666468], [98667783, 98667895], [98667979, 98668035], [98668982, 98669105], [98670738, 98670958], [98671834, 98672063], [98673245, 98673387], [98673989, 98674757]]	None
ENST00000479736	[[98654729, 98655027], [98655117, 98655291], [98658383, 98658579]]	None
ENST00000493492	[[98655262, 98655291], [98658383, 98658602], [98659615, 98659841]]	None
ENST00000468620	[[98670839, 98670958], [98671834, 98672195]]	None
ENST00000493122	[[98671832, 98672063], [98673245, 98673665]]	None
NM_002271	[[98605928, 98605970], [98606372, 98606452], [98621976, 98622084], [98628946, 98629040], [98634756, 98634837], [98637674, 98637867], [98641315, 98641418], [98642379, 98642476], [98642686, 98642791], [98645145, 98645268], [98645358, 98645479], [98649784, 98649872], [98652792, 98652899], [98654720, 98654845], [98654937, 98655027], [98655117, 98655291], [98658383, 98658602], [98660312, 98660396], [98662134, 98662267], [98662356, 98662478], [98664499, 98664596], [98666295, 98666468], [98667783, 98667895], [98667979, 98668035], [98668982, 98669105], [98670738, 98670958], [98671834, 98672063], [98673245, 98673387], [98673989, 98676550]]	[[98622034, 98622084], [98628946, 98629040], [98634756, 98634837], [98637674, 98637867], [98641315, 98641418], [98642379, 98642476], [98642686, 98642791], [98645145, 98645268], [98645358, 98645479], [98649784, 98649872], [98652792, 98652899], [98654720, 98654845], [98654937, 98655027], [98655117, 98655291], [98658383, 98658602], [98660312, 98660396], [98662134, 98662267], [98662356, 98662478], [98664499, 98664596], [98666295, 98666468], [98667783, 98667895], [98667979, 98668035], [98668982, 98669105], [98670738, 98670958], [98671834, 98672063], [98673245, 98673387], [98673989, 98674076]]