PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000481848	[[127759550, 127765427], [127767552, 127768885], [127770966, 127771046], [127771134, 127771497], [127774991, 127775246], [127794224, 127794536], [127796437, 127797613], [127804057, 127804129], [127834035, 127834194], [127835967, 127836192], [127836658, 127837847], [127839723, 127840146]]	[[127794425, 127794536], [127796437, 127797613], [127804057, 127804129], [127834035, 127834194], [127835967, 127836192], [127836658, 127837759]]
ENST00000473298	[[127765183, 127765427], [127767552, 127768885], [127770966, 127771046], [127771134, 127771497], [127774991, 127775246], [127794224, 127794536], [127796446, 127797209]]	[[127794425, 127794536], [127796446, 127797209]]
ENST00000464495	[[127771331, 127771497], [127774991, 127775232], [127794224, 127794536], [127796437, 127796618]]	[[127794425, 127794536], [127796437, 127796618]]
ENST00000474293	[[127775014, 127775246], [127794224, 127794362], [127796437, 127796839]]	None
NM_001012279	[[127759550, 127765427], [127767552, 127768885], [127770966, 127771046], [127771134, 127771497], [127774991, 127775246], [127794224, 127794536], [127796437, 127797613], [127804057, 127804129], [127834035, 127834194], [127835967, 127836192], [127836658, 127837847], [127839723, 127840500]]	[[127794425, 127794536], [127796437, 127797613], [127804057, 127804129], [127834035, 127834194], [127835967, 127836192], [127836658, 127837759]]

Promoter

Chrom	Start	End	Description
chr6	127834099	127834103	CAGE_peak_24_at_C6orf174_5end
chr6	127837142	127837208	CAGE_peak_1_at_C6orf174_5end
chr6	127837631	127837647	CAGE_peak_6_at_C6orf174_5end
chr6	127837657	127837669	CAGE_peak_10_at_C6orf174_5end
chr6	127837672	127837701	CAGE_peak_2_at_C6orf174_5end
chr6	127837739	127837748	CAGE_peak_18_at_C6orf174_5end
chr6	127839912	127839939	CAGE_peak_13_at_C6orf174_5end
chr6	127840021	127840047	CAGE_peak_4_at_C6orf174_5end
chr6	127840048	127840074	CAGE_peak_5_at_C6orf174_5end
chr6	127840089	127840099	CAGE_peak_16_at_C6orf174_5end
chr6	127840441	127840452	CAGE_peak_17_at_C6orf174_5end
chr6	127840453	127840507	CAGE_peak_3_at_C6orf174_5end
chr6	127840520	127840528	CAGE_peak_26_at_C6orf174_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I127456	127456056	127460203	1.64	[{'connected_gene': 'KIAA0408', 'score': 559.97}, {'connected_gene': 'ECHDC1', 'score': 12.96}, {'connected_gene': 'GC06P127437', 'score': 0.34}, {'connected_gene': 'ENSG00000255330', 'score': 0.21}, {'connected_gene': 'SOGA3', 'score': 0.21}]
chr6	GH06I127514	127514401	127517200	1.13	[{'connected_gene': 'KIAA0408', 'score': 22.26}, {'connected_gene': 'ENSG00000255330', 'score': 0.77}, {'connected_gene': 'SOGA3', 'score': 0.77}, {'connected_gene': 'PIR32248', 'score': 0.28}]
chr6	GH06I127463	127463049	127465668	1.07	[{'connected_gene': 'ECHDC1', 'score': 8.77}, {'connected_gene': 'KIAA0408', 'score': 0.77}, {'connected_gene': 'GC06P127475', 'score': 0.39}, {'connected_gene': 'ENSG00000255330', 'score': 0.23}, {'connected_gene': 'SOGA3', 'score': 0.23}]
chr6	GH06I127518	127518336	127519800	1.84	[{'connected_gene': 'SOGA3', 'score': 556.28}, {'connected_gene': 'ENSG00000255330', 'score': 550.77}, {'connected_gene': 'C6orf58', 'score': 550.77}, {'connected_gene': 'KIAA0408', 'score': 20.91}]
chr6	GH06I127481	127481314	127485314	1.24	[{'connected_gene': 'C6orf58', 'score': 20.44}, {'connected_gene': 'KIAA0408', 'score': 12.68}, {'connected_gene': 'ENSG00000255330', 'score': 11.69}, {'connected_gene': 'SOGA3', 'score': 11.69}, {'connected_gene': 'ECHDC1', 'score': 8.54}, {'connected_gene': 'PIR32248', 'score': 0.77}]
chr6	GH06I127446	127446456	127446605	0.43	[{'connected_gene': 'GC06P127437', 'score': 0.39}, {'connected_gene': 'KIAA0408', 'score': 0.39}, {'connected_gene': 'ENSG00000255330', 'score': 0.19}, {'connected_gene': 'SOGA3', 'score': 0.19}]