PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000319420	[[26618734, 26621204], [26624779, 26625169]]	[[26620650, 26621204], [26624779, 26625113]]
NM_001007538	[[26618734, 26621204], [26624779, 26625198]]	[[26620650, 26621204], [26624779, 26625113]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I026011	26011879	26013313	0.51	[{'connected_gene': 'ATP8A2', 'score': 19.93}, {'connected_gene': 'LINC00415', 'score': 11.25}, {'connected_gene': 'SHISA2', 'score': 11.24}, {'connected_gene': 'PIR56473', 'score': 0.31}]
chr13	GH13I025743	25743144	25744558	0.43	[{'connected_gene': 'SHISA2', 'score': 4.4}, {'connected_gene': 'PIR51943', 'score': 0.31}, {'connected_gene': 'PIR39066', 'score': 0.13}, {'connected_gene': 'ATP8A2', 'score': 0.05}]
chr13	GH13I026048	26048801	26053130	1.98	[{'connected_gene': 'SHISA2', 'score': 561.57}, {'connected_gene': 'PABPC3', 'score': 5.03}, {'connected_gene': 'LINC00415', 'score': 0.77}, {'connected_gene': 'PIR56473', 'score': 0.21}]
chr13	GH13I025544	25544596	25544932	0.22	[{'connected_gene': 'SHISA2', 'score': 9.62}, {'connected_gene': 'LINC00415', 'score': 9.62}, {'connected_gene': 'ATP8A2', 'score': 3.69}, {'connected_gene': 'AMER2', 'score': 3.57}, {'connected_gene': 'RNU6-78P', 'score': 0.31}, {'connected_gene': 'PIR39066', 'score': 0.19}]
chr13	GH13I025776	25776203	25776352	0.2	[{'connected_gene': 'SHISA2', 'score': 10.16}, {'connected_gene': 'LINC00415', 'score': 10.16}, {'connected_gene': 'PIR51943', 'score': 0.77}, {'connected_gene': 'ENSG00000180803', 'score': 0.17}, {'connected_gene': 'ATP8A2', 'score': 0.05}]
chr13	GH13I025881	25881100	25882894	1.08	[{'connected_gene': 'SHISA2', 'score': 10.54}, {'connected_gene': 'LINC00415', 'score': 10.54}, {'connected_gene': 'CDK8', 'score': 4.43}, {'connected_gene': 'PIR50437', 'score': 0.37}, {'connected_gene': 'GC13P025866', 'score': 0.37}, {'connected_gene': 'RN7SL741P', 'score': 0.21}, {'connected_gene': 'ATP8A2', 'score': 0.03}]
chr13	GH13I026074	26074571	26075152	0.38	[{'connected_gene': 'SHISA2', 'score': 17.09}, {'connected_gene': 'LINC00415', 'score': 11.63}, {'connected_gene': 'PRUNEP1', 'score': 0.26}]
chr13	GH13I026062	26062943	26063092	0.54	[{'connected_gene': 'SHISA2', 'score': 0.77}, {'connected_gene': 'PRUNEP1', 'score': 0.22}]
chr13	GH13I026061	26061547	26062904	0.57	[{'connected_gene': 'SHISA2', 'score': 13.46}, {'connected_gene': 'PRUNEP1', 'score': 0.22}]
chr13	GH13I025990	25990963	25991092	0.2	[{'connected_gene': 'LINC00415', 'score': 11.25}, {'connected_gene': 'SHISA2', 'score': 11.25}, {'connected_gene': 'PIR56473', 'score': 0.77}, {'connected_gene': 'ATP8A2', 'score': 0.03}]
chr13	GH13I025836	25836275	25837784	0.54	[{'connected_gene': 'LINC00415', 'score': 11.04}, {'connected_gene': 'SHISA2', 'score': 11.04}, {'connected_gene': 'ENSG00000180803', 'score': 0.31}, {'connected_gene': 'PIR51943', 'score': 0.2}, {'connected_gene': 'ATP8A2', 'score': 0.04}]
chr13	GH13I025991	25990260	25990593	0.34	[{'connected_gene': 'LINC00415', 'score': 11.25}, {'connected_gene': 'SHISA2', 'score': 11.25}, {'connected_gene': 'PIR56473', 'score': 0.77}, {'connected_gene': 'ATP8A2', 'score': 0.03}]
chr13	GH13I025927	25927460	25929315	0.43	[{'connected_gene': 'LINC00415', 'score': 10.95}, {'connected_gene': 'SHISA2', 'score': 10.95}, {'connected_gene': 'RN7SL741P', 'score': 0.37}, {'connected_gene': 'PIR50437', 'score': 0.21}, {'connected_gene': 'GC13P025866', 'score': 0.21}, {'connected_gene': 'ATP8A2', 'score': 0.03}]
chr13	GH13I025574	25574563	25574712	0.63	[{'connected_gene': 'LINC00415', 'score': 11.27}, {'connected_gene': 'SHISA2', 'score': 11.27}, {'connected_gene': 'PIR39066', 'score': 0.26}, {'connected_gene': 'RNU6-78P', 'score': 0.22}, {'connected_gene': 'ATP8A2', 'score': 0.08}]
chr13	GH13I026049	26048401	26048600	0.2	[{'connected_gene': 'LINC00415', 'score': 0.77}, {'connected_gene': 'SHISA2', 'score': 0.39}, {'connected_gene': 'PIR56473', 'score': 0.21}]
chr13	GH13I026030	26030423	26030572	0.2	[{'connected_gene': 'LINC00415', 'score': 11.48}, {'connected_gene': 'SHISA2', 'score': 11.45}, {'connected_gene': 'PIR56473', 'score': 0.26}]
chr13	GH13I025988	25988823	25988952	0.59	[{'connected_gene': 'PIR56473', 'score': 550.77}, {'connected_gene': 'LINC00415', 'score': 11.25}, {'connected_gene': 'SHISA2', 'score': 11.24}, {'connected_gene': 'ATP8A2', 'score': 0.03}]